RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 GPHA2Q96T91 129 aa11.07□□□□□ -0.64
HDAC4-205ENST00000454542 C6orf62Q9GZU0 229 aaPredicted RBP11.07□□□□□ -0.64
HDAC4-205ENST00000454542 TNFSF12O43508 249 aa11.06□□□□□ -0.64
HDAC4-205ENST00000454542 UCP3P55916 312 aa11.06□□□□□ -0.64
HDAC4-205ENST00000454542 PJVKQ0ZLH3 352 aa11.06□□□□□ -0.64
HDAC4-205ENST00000454542 CATR1Q13166 79 aa11.06□□□□□ -0.64
HDAC4-205ENST00000454542 KIAA0141Q14154 515 aaPredicted RBP11.06□□□□□ -0.64
HDAC4-205ENST00000454542 POU2AF1Q16633 256 aa11.06□□□□□ -0.64
HDAC4-205ENST00000454542 PRSS8Q16651 343 aa11.06□□□□□ -0.64
HDAC4-205ENST00000454542 ECSCRQ19T08 205 aa11.06□□□□□ -0.64
HDAC4-205ENST00000454542 AKIRIN2Q53H80 203 aa11.06□□□□□ -0.64
HDAC4-205ENST00000454542 KHDC1LQ5JSQ8 128 aa11.06□□□□□ -0.64
HDAC4-205ENST00000454542 LCNL1Q6ZST4 164 aa11.06□□□□□ -0.64
HDAC4-205ENST00000454542 ARRDC1Q8N5I2 433 aa11.06□□□□□ -0.64
HDAC4-205ENST00000454542 TMEM229BQ8NBD8 167 aa11.06□□□□□ -0.64
HDAC4-205ENST00000454542 DIRAS2Q96HU8 199 aa11.06□□□□□ -0.64
HDAC4-205ENST00000454542 TINAGL1Q9GZM7 467 aaPredicted RBP11.06□□□□□ -0.64
HDAC4-205ENST00000454542 FOXA2Q9Y261 457 aaPredicted RBP11.06□□□□□ -0.64
HDAC4-205ENST00000454542 WSB1Q9Y6I7 421 aa11.06□□□□□ -0.64
HDAC4-205ENST00000454542 MEGF8Q7Z7M0 2845 aa11.06□□□□□ -0.64
HDAC4-205ENST00000454542 CCDC160A6NGH7 325 aa11.05□□□□□ -0.64
HDAC4-205ENST00000454542 M0QYG6 137 aa11.05□□□□□ -0.64
HDAC4-205ENST00000454542 GPR31O00270 319 aa11.05□□□□□ -0.64
HDAC4-205ENST00000454542 GSTZ1O43708 216 aaPredicted RBP11.05□□□□□ -0.64
HDAC4-205ENST00000454542 RAMP3O60896 148 aa11.05□□□□□ -0.64
HDAC4-205ENST00000454542 CD3DP04234 171 aa11.05□□□□□ -0.64
HDAC4-205ENST00000454542 PF4V1P10720 104 aa11.05□□□□□ -0.64
HDAC4-205ENST00000454542 TNFSF8P32971 234 aa11.05□□□□□ -0.64
HDAC4-205ENST00000454542 CDX1P47902 265 aaPredicted RBP11.05□□□□□ -0.64
HDAC4-205ENST00000454542 RNASE10Q5GAN6 216 aaKnown RBP11.05□□□□□ -0.64
HDAC4-205ENST00000454542 ASPHD1Q5U4P2 390 aa11.05□□□□□ -0.64
HDAC4-205ENST00000454542 FCAMRQ8WWV6 532 aa11.05□□□□□ -0.64
HDAC4-205ENST00000454542 CLCC1Q96S66 551 aa11.05□□□□□ -0.64
HDAC4-205ENST00000454542 DCUN1D5Q9BTE7 237 aa11.05□□□□□ -0.64
HDAC4-205ENST00000454542 FAM103A1Q9BTL3 118 aaKnown RBP11.05□□□□□ -0.64
HDAC4-205ENST00000454542 RSRP1Q9BUV0 290 aa11.05□□□□□ -0.64
HDAC4-205ENST00000454542 TNCP24821 2201 aa11.04□□□□□ -0.64
HDAC4-205ENST00000454542 A0A1W2PN81 502 aa11.04□□□□□ -0.64
HDAC4-205ENST00000454542 CREBL2O60519 120 aaPredicted RBP11.04□□□□□ -0.64
HDAC4-205ENST00000454542 KBTBD11O94819 623 aa11.04□□□□□ -0.64
HDAC4-205ENST00000454542 CHRNA7P36544 502 aa11.04□□□□□ -0.64
HDAC4-205ENST00000454542 TAS2R19P59542 299 aa11.04□□□□□ -0.64
HDAC4-205ENST00000454542 TMEM267Q0VDI3 215 aaPredicted RBP11.04□□□□□ -0.64
HDAC4-205ENST00000454542 IL18Q14116 193 aa11.04□□□□□ -0.64
HDAC4-205ENST00000454542 FXYD3Q14802 87 aa11.04□□□□□ -0.64
HDAC4-205ENST00000454542 IDO2Q6ZQW0 420 aa11.04□□□□□ -0.64
HDAC4-205ENST00000454542 C8orf86Q6ZUL3 223 aa11.04□□□□□ -0.64
HDAC4-205ENST00000454542 ZNF695Q8IW36 515 aa11.04□□□□□ -0.64
HDAC4-205ENST00000454542 SPAG16Q8N0X2 631 aa11.04□□□□□ -0.64
HDAC4-205ENST00000454542 KLHL30-AS1Q8NEE0 82 aa11.04□□□□□ -0.64
HDAC4-205ENST00000454542 WFDC9Q8NEX5 89 aa11.04□□□□□ -0.64
HDAC4-205ENST00000454542 OR4D10Q8NGI6 311 aa11.04□□□□□ -0.64
HDAC4-205ENST00000454542 OR5M8Q8NGP6 311 aa11.04□□□□□ -0.64
HDAC4-205ENST00000454542 VSTM2AQ8TAG5 236 aa11.04□□□□□ -0.64
HDAC4-205ENST00000454542 TMEM167AQ8TBQ9 72 aa11.04□□□□□ -0.64
HDAC4-205ENST00000454542 P2RX4Q99571 388 aa11.04□□□□□ -0.64
HDAC4-205ENST00000454542 KLK15Q9H2R5 256 aa11.04□□□□□ -0.64
HDAC4-205ENST00000454542 ZNF430Q9H8G1 570 aaPredicted RBP11.04□□□□□ -0.64
HDAC4-205ENST00000454542 COMMD9Q9P000 198 aa11.04□□□□□ -0.64
HDAC4-205ENST00000454542 V9GYH0 126 aa11.04□□□□□ -0.64
HDAC4-205ENST00000454542 H3BUA1 57 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 PGLYRP1O75594 196 aaPredicted RBP11.03□□□□□ -0.64
HDAC4-205ENST00000454542 BRI3O95415 125 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 HPRT1P00492 218 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 RLN1P04808 185 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 IL6RP08887 468 aaPredicted RBP11.03□□□□□ -0.64
HDAC4-205ENST00000454542 FGF2P09038 288 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 ZNF735P0CB33 412 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 TAS2R31P59538 309 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 TSPAN5P62079 268 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 RUNX1Q01196 453 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 FHL3Q13643 280 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 SAMD5Q5TGI4 173 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 UNQ5815/PRO19632Q6UWF5 114 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 MMD2Q8IY49 270 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 SLC38A6Q8IZM9 456 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 VKORC1L1Q8N0U8 176 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 LINC00482Q8N8I6 264 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 ZNF491Q8N8L2 437 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 LFNGQ8NES3 379 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 OR51H1Q8NH63 302 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 GRPEL2Q8TAA5 225 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 CD300LFQ8TDQ1 290 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 ABHD5Q8WTS1 349 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 C4orf3Q8WVX3 66 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 SRSF12Q8WXF0 261 aaKnown RBP11.03□□□□□ -0.64
HDAC4-205ENST00000454542 RHOVQ96L33 236 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 UBE2E2Q96LR5 201 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 TMEM68Q96MH6 324 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 PLEKHA2Q9HB19 425 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 FAM212BQ9NTI7 297 aaPredicted RBP11.03□□□□□ -0.64
HDAC4-205ENST00000454542 BET1LQ9NYM9 111 aa11.03□□□□□ -0.64
HDAC4-205ENST00000454542 OR2A4O95047 310 aa11.02□□□□□ -0.65
HDAC4-205ENST00000454542 S1PR2O95136 353 aa11.02□□□□□ -0.65
HDAC4-205ENST00000454542 HRASP01112 189 aa11.02□□□□□ -0.65
HDAC4-205ENST00000454542 PF4P02776 101 aa11.02□□□□□ -0.65
HDAC4-205ENST00000454542 F2RP25116 425 aa11.02□□□□□ -0.65
HDAC4-205ENST00000454542 RAB9AP51151 201 aa11.02□□□□□ -0.65
HDAC4-205ENST00000454542 RND3P61587 244 aa11.02□□□□□ -0.65
HDAC4-205ENST00000454542 KPRPQ5T749 579 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms