RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 MIOXQ9UGB7 285 aa8.5□□□□□ -1.05
CSGALNACT1-203ENST00000454498 RALYQ9UKM9 306 aaKnown RBP8.5□□□□□ -1.05
CSGALNACT1-203ENST00000454498 MALRD1Q5VYJ5 2156 aa8.5□□□□□ -1.05
CSGALNACT1-203ENST00000454498 IGKV1-12A0A0C4DH73 117 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 CEACAM18A8MTB9 384 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 MPTX1A8MV57 137 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 IGKV1D-12P01611 117 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 MMP7P09237 267 aaPredicted RBP8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 SUMO1P63165 101 aaKnown RBP8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 TMEM30BQ3MIR4 351 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 DHRS11Q6UWP2 260 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 OR4C13Q8NGP0 309 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 GRAMD2BQ96HH9 432 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 METTL1Q9UBP6 276 aaKnown RBP8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 C5orf63A6NC05 138 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 C17orf100A8MU93 164 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 SNRPCP09234 159 aaKnown RBP8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 B3GALT5-AS1P59052 145 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 RPL39P5Q59GN2 51 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 DHRS7BQ6IAN0 325 aaPredicted RBP8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 CYB561D1Q8N8Q1 229 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 FAM222BQ8WU58 562 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 PERPQ96FX8 193 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 AURKAIP1Q9NWT8 199 aaPredicted RBP8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 BMI1P35226 326 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 KIR2DL2P43627 348 aaPredicted RBP8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 NHLRC3Q5JS37 347 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 SLC16A13Q7RTY0 426 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 ZCCHC24Q8N2G6 241 aaKnown RBP8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 SMDT1Q9H4I9 107 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 DENND4CQ5VZ89 1909 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 CSPG4Q6UVK1 2322 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 IL18BPO95998 194 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 LIPFP07098 398 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 USF1P22415 310 aaPredicted RBP8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 WNT5AP41221 380 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 RNF212Q495C1 297 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 DPPA3Q6W0C5 159 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 PLPPR1Q8TBJ4 325 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 TMEM186Q96B77 213 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 FAM103A1Q9BTL3 118 aaKnown RBP8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 RSRP1Q9BUV0 290 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 TOLLIPQ9H0E2 274 aa8.49□□□□□ -1.05
CSGALNACT1-203ENST00000454498 A0A0A6YYD4 124 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 FCN1O00602 326 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 SIGLEC5O15389 551 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 LINC00869P0C866 280 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 CAMPP49913 170 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 SNRPEP62304 92 aaKnown RBP8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 FAM216AQ8WUB2 273 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 IGKV1D-8A0A087WSZ0 117 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 HELTA6NFD8 242 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 DLL1O00548 723 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 PDE6DO43924 150 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 EIF3GO75821 320 aaKnown RBP eCLIP8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 ATP5J2P56134 94 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 TCL1AP56279 114 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 SELENOTP62341 195 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 GUCA2BQ16661 112 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 FAM162BQ5T6X4 162 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 MIC13Q5XKP0 118 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 ZNF880Q6PDB4 577 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 ZNF705AQ6ZN79 300 aaPredicted RBP8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 SSX7Q7RTT5 188 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 CLEC7AQ9BXN2 247 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 PNRC2Q9NPJ4 139 aaKnown RBP8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 B4DEV8 164 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 HYPMO75409 117 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 RND2P52198 227 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 LAMTOR1Q6IAA8 161 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 ZNF600Q6ZNG1 722 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 SMIM8Q96KF7 97 aa8.48□□□□□ -1.05
CSGALNACT1-203ENST00000454498 IGKV3-7A0A075B6H7 116 aa8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 IGKV1D-13A0A0B4J2D9 117 aa8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 ZNF735P0CB33 412 aa8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 IGKV1-13P0DP09 117 aa8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 COX6B1P14854 86 aa8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 FABP4P15090 132 aa8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 FHITP49789 147 aa8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 RND3P61587 244 aa8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 RANP62826 216 aaKnown RBP8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 MEF2BQ02080 365 aaPredicted RBP8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 FAM74A3Q4VXF1 159 aa8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 WDR82Q6UXN9 313 aa8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 DPF1Q92782 380 aa8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 RAB24Q969Q5 203 aa8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 MRPL37Q9BZE1 423 aaKnown RBP8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 SH3BGRL3Q9H299 93 aa8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 LOC105371242A0A075B767 164 aa8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 TRAV24A0A0B4J272 114 aa8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 IGHV1-18A0A0C4DH31 117 aa8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 C17orf98A8MV24 154 aa8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 KIAA1324LA8MWY0 1029 aaPredicted RBP8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 CORTO00230 105 aa8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 HIST3H3Q16695 136 aa8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 FAM166AQ6J272 317 aa8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 PNKDQ8N490 385 aa8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 GTF3AQ92664 365 aaKnown RBP8.47□□□□□ -1.05
CSGALNACT1-203ENST00000454498 TMEM204Q9BSN7 226 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms