RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 COL10A1Q03692 680 aa13.17□□□□□ -0.3
SNX17-204ENST00000453453 HAGHQ16775 308 aa13.17□□□□□ -0.3
SNX17-204ENST00000453453 COA6Q5JTJ3 125 aaKnown RBP13.17□□□□□ -0.3
SNX17-204ENST00000453453 ZNF695Q8IW36 515 aa13.17□□□□□ -0.3
SNX17-204ENST00000453453 CMTM1Q8IZ96 169 aa13.17□□□□□ -0.3
SNX17-204ENST00000453453 SELENOHQ8IZQ5 122 aaKnown RBP13.17□□□□□ -0.3
SNX17-204ENST00000453453 DEFB108BQ8NET1 73 aa13.17□□□□□ -0.3
SNX17-204ENST00000453453 TP53RKQ96S44 253 aa13.17□□□□□ -0.3
SNX17-204ENST00000453453 CCL19Q99731 98 aa13.17□□□□□ -0.3
SNX17-204ENST00000453453 HRNRQ86YZ3 2850 aaPredicted RBP13.16□□□□□ -0.3
SNX17-204ENST00000453453 IGKV1D-17A0A075B6S4 117 aa13.16□□□□□ -0.3
SNX17-204ENST00000453453 TGIF2-C20orf24A0A0A6YYL0 155 aa13.16□□□□□ -0.3
SNX17-204ENST00000453453 PHOX2AO14813 284 aa13.16□□□□□ -0.3
SNX17-204ENST00000453453 TRGC1P0CF51 173 aa13.16□□□□□ -0.3
SNX17-204ENST00000453453 NMSQ5H8A3 153 aa13.16□□□□□ -0.3
SNX17-204ENST00000453453 FAM201AQ5SY85 155 aa13.16□□□□□ -0.3
SNX17-204ENST00000453453 TGIF2LYQ8IUE0 185 aa13.16□□□□□ -0.3
SNX17-204ENST00000453453 BEND2Q8NDZ0 799 aa13.16□□□□□ -0.3
SNX17-204ENST00000453453 OR5C1Q8NGR4 320 aa13.16□□□□□ -0.3
SNX17-204ENST00000453453 MBD3L1Q8WWY6 194 aa13.16□□□□□ -0.3
SNX17-204ENST00000453453 RAB24Q969Q5 203 aa13.16□□□□□ -0.3
SNX17-204ENST00000453453 PSMG3Q9BT73 122 aaPredicted RBP13.16□□□□□ -0.3
SNX17-204ENST00000453453 PARD6GQ9BYG4 376 aaPredicted RBP13.16□□□□□ -0.3
SNX17-204ENST00000453453 DCAF16Q9NXF7 216 aa13.16□□□□□ -0.3
SNX17-204ENST00000453453 UBE2J1Q9Y385 318 aaPredicted RBP13.16□□□□□ -0.3
SNX17-204ENST00000453453 ZNF205O95201 554 aa13.15□□□□□ -0.3
SNX17-204ENST00000453453 IFNA1P01562 189 aa13.15□□□□□ -0.3
SNX17-204ENST00000453453 TRGC2P03986 189 aa13.15□□□□□ -0.3
SNX17-204ENST00000453453 VDAC1P21796 283 aa13.15□□□□□ -0.3
SNX17-204ENST00000453453 DYNLT3P51808 116 aa13.15□□□□□ -0.3
SNX17-204ENST00000453453 JOSD1Q15040 202 aaPredicted RBP13.15□□□□□ -0.3
SNX17-204ENST00000453453 FAM90A2PQ658T7 463 aa13.15□□□□□ -0.3
SNX17-204ENST00000453453 STUMQ69YW2 141 aa13.15□□□□□ -0.3
SNX17-204ENST00000453453 ZNF343Q6P1L6 599 aa13.15□□□□□ -0.3
SNX17-204ENST00000453453 TMEM183AQ8IXX5 376 aa13.15□□□□□ -0.3
SNX17-204ENST00000453453 CD177Q8N6Q3 437 aa13.15□□□□□ -0.3
SNX17-204ENST00000453453 OR5D13Q8NGL4 314 aa13.15□□□□□ -0.3
SNX17-204ENST00000453453 DYRK2Q92630 601 aa13.15□□□□□ -0.3
SNX17-204ENST00000453453 TIMD4Q96H15 378 aa13.15□□□□□ -0.3
SNX17-204ENST00000453453 SNX22Q96L94 193 aa13.15□□□□□ -0.3
SNX17-204ENST00000453453 AGMATQ9BSE5 352 aa13.15□□□□□ -0.3
SNX17-204ENST00000453453 GPR61Q9BZJ8 451 aa13.15□□□□□ -0.3
SNX17-204ENST00000453453 ACTR3CQ9C0K3 210 aaPredicted RBP13.15□□□□□ -0.3
SNX17-204ENST00000453453 ZNF665Q9H7R5 613 aa13.15□□□□□ -0.3
SNX17-204ENST00000453453 A0A087X0M5 115 aa13.14□□□□□ -0.31
SNX17-204ENST00000453453 A0A1B0GX30 115 aa13.14□□□□□ -0.31
SNX17-204ENST00000453453 IFNA5P01569 189 aa13.14□□□□□ -0.31
SNX17-204ENST00000453453 CTXN2P0C2S0 81 aa13.14□□□□□ -0.31
SNX17-204ENST00000453453 BCL2P10415 239 aa13.14□□□□□ -0.31
SNX17-204ENST00000453453 COL8A2P25067 703 aa13.14□□□□□ -0.31
SNX17-204ENST00000453453 EFNA4P52798 201 aa13.14□□□□□ -0.31
SNX17-204ENST00000453453 GAMTQ14353 236 aa13.14□□□□□ -0.31
SNX17-204ENST00000453453 PYGO2Q9BRQ0 406 aa13.14□□□□□ -0.31
SNX17-204ENST00000453453 SRD5A3Q9H8P0 318 aa13.14□□□□□ -0.31
SNX17-204ENST00000453453 SSSCA1O60232 199 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 GYPAP02724 150 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 SPCS3P61009 180 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 ABHD5Q8WTS1 349 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 FRZBQ92765 325 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 RAB1CQ92928 201 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 SDSLQ96GA7 329 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 PACRGQ96M98 296 aaPredicted RBP13.13□□□□□ -0.31
SNX17-204ENST00000453453 RAB40CQ96S21 281 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 ABHD14AQ9BUJ0 271 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 SDF2L1Q9HCN8 221 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 TMEM30CPA0ZSE6 113 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 LYNX1G3V0Z9 82 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 H0Y980 276 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 OVOL3O00110 214 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 PSPNO60542 156 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 FSTL3O95633 263 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 NAPSAO96009 420 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 LYNX1P0DP58 116 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 COL8A1P27658 744 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 OR3A1P47881 315 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 ZNF497Q6ZNH5 498 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 MOB1BQ7L9L4 216 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 TBC1D26Q86UD7 250 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 ZNF295-AS1Q8N0V1 137 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 HIST1H2BLQ99880 126 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 FAM234AQ9H0X4 552 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 CHODLQ9H9P2 273 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 METRNQ9UJH8 293 aa13.13□□□□□ -0.31
SNX17-204ENST00000453453 TRBV6-6A0A0A6YYG2 114 aa13.12□□□□□ -0.31
SNX17-204ENST00000453453 A0A1B0GV50 99 aa13.12□□□□□ -0.31
SNX17-204ENST00000453453 MGST3O14880 152 aa13.12□□□□□ -0.31
SNX17-204ENST00000453453 TUSC2O75896 110 aa13.12□□□□□ -0.31
SNX17-204ENST00000453453 GCGP01275 180 aa13.12□□□□□ -0.31
SNX17-204ENST00000453453 TFF1P04155 84 aa13.12□□□□□ -0.31
SNX17-204ENST00000453453 SLC35E4Q6ICL7 350 aa13.12□□□□□ -0.31
SNX17-204ENST00000453453 ZNF788Q6ZQV5 615 aa13.12□□□□□ -0.31
SNX17-204ENST00000453453 ODF3L1Q8IXM7 274 aa13.12□□□□□ -0.31
SNX17-204ENST00000453453 PLPPR1Q8TBJ4 325 aa13.12□□□□□ -0.31
SNX17-204ENST00000453453 ACY3Q96HD9 319 aa13.12□□□□□ -0.31
SNX17-204ENST00000453453 GAFA1Q96PS6 74 aa13.12□□□□□ -0.31
SNX17-204ENST00000453453 PSMG3-AS1Q96PY0 264 aa13.12□□□□□ -0.31
SNX17-204ENST00000453453 CCL13Q99616 98 aa13.12□□□□□ -0.31
SNX17-204ENST00000453453 KIR2DS1A0A191URI9 304 aa13.11□□□□□ -0.31
SNX17-204ENST00000453453 ADAM20O43506 726 aa13.11□□□□□ -0.31
SNX17-204ENST00000453453 ZNF737O75373 536 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms