RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 COLCA2A8K830 154 aa6.57□□□□□ -1.36
RIF1-206ENST00000453091 ISLRO14498 428 aa6.57□□□□□ -1.36
RIF1-206ENST00000453091 HYPMO75409 117 aa6.57□□□□□ -1.36
RIF1-206ENST00000453091 CD33P20138 364 aa6.57□□□□□ -1.36
RIF1-206ENST00000453091 STARD6P59095 220 aa6.57□□□□□ -1.36
RIF1-206ENST00000453091 ZNF525Q8N782 197 aa6.57□□□□□ -1.36
RIF1-206ENST00000453091 OIT3Q8WWZ8 545 aa6.57□□□□□ -1.36
RIF1-206ENST00000453091 OR5P3Q8WZ94 311 aa6.57□□□□□ -1.36
RIF1-206ENST00000453091 HSPB8Q9UJY1 196 aa6.57□□□□□ -1.36
RIF1-206ENST00000453091 CHCHD2Q9Y6H1 151 aaPredicted RBP6.57□□□□□ -1.36
RIF1-206ENST00000453091 COL4A6Q14031 1691 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 LNP1A1A4G5 178 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 LINC00205P59089 165 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 TAS2R60P59551 318 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 C18orf12Q96KH6 178 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 UBR3Q6ZT12 1888 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 C7orf71A4D174 169 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 RPL23P62829 140 aaKnown RBP6.56□□□□□ -1.36
RIF1-206ENST00000453091 CFHR1Q03591 330 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 SRSF9Q13242 221 aaKnown RBP eCLIP6.56□□□□□ -1.36
RIF1-206ENST00000453091 LRRC75BQ2VPJ9 315 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 LEMD1Q68G75 181 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 PPP1R32Q7Z5V6 425 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 C18orf15Q96N68 181 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 GAGE10A6NGK3 116 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 FGF16O43320 207 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 FDCSPQ8NFU4 85 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 SNRNP40Q96DI7 357 aaKnown RBP6.56□□□□□ -1.36
RIF1-206ENST00000453091 RABAC1Q9UI14 185 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 PPIAL4EA0A075B759 164 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 IGKV1-12A0A0C4DH73 117 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 PPIAL4DF5H284 164 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 DNPH1O43598 174 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 IGKV1D-12P01611 117 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 PPIAL4FP0DN26 164 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 FCGR2BP31994 310 aaPredicted RBP6.56□□□□□ -1.36
RIF1-206ENST00000453091 ADTRPQ96IZ2 230 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 ASCL2Q99929 193 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 TBL2Q9Y4P3 447 aaKnown RBP6.56□□□□□ -1.36
RIF1-206ENST00000453091 PPIAL4AQ9Y536 164 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 TMEM210A6NLX4 147 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 ZNF716A6NP11 495 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 PCSK4Q6UW60 755 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 NAA38Q9BRA0 125 aaKnown RBP6.56□□□□□ -1.36
RIF1-206ENST00000453091 RNASE7Q9H1E1 156 aaKnown RBP6.56□□□□□ -1.36
RIF1-206ENST00000453091 IGKV3D-11A0A0A0MRZ8 115 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 MGST3O14880 152 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 ZNF738Q8NE65 137 aa6.56□□□□□ -1.36
RIF1-206ENST00000453091 GMPPAQ96IJ6 420 aaPredicted RBP6.56□□□□□ -1.36
RIF1-206ENST00000453091 COL5A3P25940 1745 aaPredicted RBP6.56□□□□□ -1.36
RIF1-206ENST00000453091 CDX4O14627 284 aaPredicted RBP6.55□□□□□ -1.36
RIF1-206ENST00000453091 SERF1AO75920 110 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 CA1P00915 261 aaPredicted RBP6.55□□□□□ -1.36
RIF1-206ENST00000453091 MYOD1P15172 320 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 HOXA4Q00056 320 aaPredicted RBP6.55□□□□□ -1.36
RIF1-206ENST00000453091 LY6EQ16553 131 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 C1orf185Q5T7R7 199 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 SPATA31B1PQ5VZV4 182 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 INO80CQ6PI98 192 aaPredicted RBP6.55□□□□□ -1.36
RIF1-206ENST00000453091 DNAJC4Q9NNZ3 241 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 NRXN2Q9P2S2 1712 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 LEPROTL1O95214 131 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 CRIPAKQ8N1N5 446 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 FAM216BQ8N7L0 139 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 GALNT14Q96FL9 552 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 WDYHV1Q96HA8 205 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 C9JQL5 133 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 HIST1H2BKO60814 126 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 HIST1H2BJP06899 126 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 HIST1H2BOP23527 126 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 HIST1H2BBP33778 126 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 RPL27AP46776 148 aaKnown RBP6.55□□□□□ -1.36
RIF1-206ENST00000453091 HIST1H2BDP58876 126 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 HIST1H2BCP62807 126 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 HIST2H2BEQ16778 126 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.55□□□□□ -1.36
RIF1-206ENST00000453091 HIST1H2BHQ93079 126 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 HIST1H2BNQ99877 126 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 HIST1H2BMQ99879 126 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 ARF6P62330 175 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 ZBTB34Q8NCN2 500 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 OR4B1Q8NGF8 309 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 ZNF714Q96N38 554 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 WDR54Q9H977 334 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 HSPB7Q9UBY9 170 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.55□□□□□ -1.36
RIF1-206ENST00000453091 K7N7A8 449 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 CIDEAO60543 219 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 RAMP3O60896 148 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 CLDN18P56856 261 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 GOLT1AQ6ZVE7 132 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 CARFQ8N187 725 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 CYYR1Q96J86 154 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 DLL1O00548 723 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 LINC00596Q86U02 117 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 KCNS1Q96KK3 526 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 IDI2-AS1Q9NZ38 188 aa6.55□□□□□ -1.36
RIF1-206ENST00000453091 FOXD3Q9UJU5 478 aaPredicted RBP6.55□□□□□ -1.36
RIF1-206ENST00000453091 LSM4Q9Y4Z0 139 aaKnown RBP6.55□□□□□ -1.36
RIF1-206ENST00000453091 FAM214BQ7L5A3 538 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms