RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 YLPM1P49750 1951 aaKnown RBP10.1□□□□□ -0.79
COL27A1-202ENST00000451716 ZGRF1Q86YA3 2104 aa10.1□□□□□ -0.79
COL27A1-202ENST00000451716 A0A1W2PPE2 198 aa10.1□□□□□ -0.79
COL27A1-202ENST00000451716 HTD2P86397 168 aa10.1□□□□□ -0.79
COL27A1-202ENST00000451716 LRRC29Q8WV35 223 aa10.1□□□□□ -0.79
COL27A1-202ENST00000451716 HIST1H2BLQ99880 126 aa10.1□□□□□ -0.79
COL27A1-202ENST00000451716 SCRT1Q9BWW7 348 aa10.1□□□□□ -0.79
COL27A1-202ENST00000451716 SLC25A15Q9Y619 301 aa10.1□□□□□ -0.79
COL27A1-202ENST00000451716 A0A1B0GU03 582 aa10.1□□□□□ -0.79
COL27A1-202ENST00000451716 K7N7A8 449 aa10.1□□□□□ -0.79
COL27A1-202ENST00000451716 EGR1P18146 543 aa10.1□□□□□ -0.79
COL27A1-202ENST00000451716 KITLGP21583 273 aa10.1□□□□□ -0.79
COL27A1-202ENST00000451716 RPL30P62888 115 aaKnown RBP10.1□□□□□ -0.79
COL27A1-202ENST00000451716 HAGHQ16775 308 aa10.1□□□□□ -0.79
COL27A1-202ENST00000451716 OR13A1Q8NGR1 328 aa10.1□□□□□ -0.79
COL27A1-202ENST00000451716 IGHV3OR15-7A0A075B7D8 119 aa10.09□□□□□ -0.79
COL27A1-202ENST00000451716 MBD3L4A6NDZ8 208 aaPredicted RBP10.09□□□□□ -0.79
COL27A1-202ENST00000451716 MBD3L3A6NE82 208 aaPredicted RBP10.09□□□□□ -0.79
COL27A1-202ENST00000451716 MBD3L5A6NJ08 208 aaPredicted RBP10.09□□□□□ -0.79
COL27A1-202ENST00000451716 ZNF816Q0VGE8 651 aaPredicted RBP10.09□□□□□ -0.79
COL27A1-202ENST00000451716 SCGB2A2Q13296 93 aa10.09□□□□□ -0.79
COL27A1-202ENST00000451716 P2RY6Q15077 328 aa10.09□□□□□ -0.79
COL27A1-202ENST00000451716 IGF2-ASQ6U949 168 aa10.09□□□□□ -0.79
COL27A1-202ENST00000451716 SLC35E3Q7Z769 313 aa10.09□□□□□ -0.79
COL27A1-202ENST00000451716 CD177Q8N6Q3 437 aa10.09□□□□□ -0.79
COL27A1-202ENST00000451716 MBD3L2Q8NHZ7 208 aaPredicted RBP10.09□□□□□ -0.79
COL27A1-202ENST00000451716 RARRES2Q99969 163 aa10.09□□□□□ -0.79
COL27A1-202ENST00000451716 C1QTNF9BB2RNN3 333 aa10.09□□□□□ -0.79
COL27A1-202ENST00000451716 KRASP01116 189 aa10.09□□□□□ -0.79
COL27A1-202ENST00000451716 IGHV3-13P01766 116 aa10.09□□□□□ -0.79
COL27A1-202ENST00000451716 IGHV3-7P01780 117 aa10.09□□□□□ -0.79
COL27A1-202ENST00000451716 LMO1P25800 156 aa10.09□□□□□ -0.79
COL27A1-202ENST00000451716 HEPN1Q6WQI6 88 aa10.09□□□□□ -0.79
COL27A1-202ENST00000451716 C22orf34Q6ZV56 151 aa10.09□□□□□ -0.79
COL27A1-202ENST00000451716 FGFRL1Q8N441 504 aa10.09□□□□□ -0.79
COL27A1-202ENST00000451716 ABHD14BQ96IU4 210 aa10.09□□□□□ -0.79
COL27A1-202ENST00000451716 DVL1O14640 695 aa10.08□□□□□ -0.8
COL27A1-202ENST00000451716 CYB5BO43169 146 aa10.08□□□□□ -0.8
COL27A1-202ENST00000451716 CEACAM1P13688 526 aa10.08□□□□□ -0.8
COL27A1-202ENST00000451716 SULT1A1P50225 295 aa10.08□□□□□ -0.8
COL27A1-202ENST00000451716 RAB7AP51149 207 aa10.08□□□□□ -0.8
COL27A1-202ENST00000451716 RBMXL3Q8N7X1 1067 aaKnown RBP10.08□□□□□ -0.8
COL27A1-202ENST00000451716 LIN7CQ9NUP9 197 aaKnown RBP10.08□□□□□ -0.8
COL27A1-202ENST00000451716 LOC105371242A0A075B767 164 aa10.08□□□□□ -0.8
COL27A1-202ENST00000451716 OR13C7P0DN81 318 aa10.08□□□□□ -0.8
COL27A1-202ENST00000451716 MC5RP33032 325 aa10.08□□□□□ -0.8
COL27A1-202ENST00000451716 G6PCP35575 357 aa10.08□□□□□ -0.8
COL27A1-202ENST00000451716 COMPP49747 757 aaPredicted RBP10.08□□□□□ -0.8
COL27A1-202ENST00000451716 ARL16Q0P5N6 197 aa10.08□□□□□ -0.8
COL27A1-202ENST00000451716 SMIM21Q3B7S5 101 aa10.08□□□□□ -0.8
COL27A1-202ENST00000451716 FAM201AQ5SY85 155 aa10.08□□□□□ -0.8
COL27A1-202ENST00000451716 ACTR3CQ9C0K3 210 aaPredicted RBP10.08□□□□□ -0.8
COL27A1-202ENST00000451716 HIPK2Q9H2X6 1198 aa10.08□□□□□ -0.8
COL27A1-202ENST00000451716 OOEPA6NGQ2 149 aa10.08□□□□□ -0.8
COL27A1-202ENST00000451716 SYNGR2O43760 224 aa10.08□□□□□ -0.8
COL27A1-202ENST00000451716 SELENOVP59797 346 aa10.08□□□□□ -0.8
COL27A1-202ENST00000451716 MBNL2Q5VZF2 373 aaKnown RBP10.08□□□□□ -0.8
COL27A1-202ENST00000451716 SLC35E4Q6ICL7 350 aa10.08□□□□□ -0.8
COL27A1-202ENST00000451716 TEX38Q6PEX7 206 aa10.08□□□□□ -0.8
COL27A1-202ENST00000451716 SHISA2Q6UWI4 295 aa10.08□□□□□ -0.8
COL27A1-202ENST00000451716 Q6ZS92 163 aa10.08□□□□□ -0.8
COL27A1-202ENST00000451716 STRAPQ9Y3F4 350 aaKnown RBP10.08□□□□□ -0.8
COL27A1-202ENST00000451716 MMP24Q9Y5R2 645 aa10.08□□□□□ -0.8
COL27A1-202ENST00000451716 SPRY3O43610 288 aa10.07□□□□□ -0.8
COL27A1-202ENST00000451716 OR4A8P0C604 315 aa10.07□□□□□ -0.8
COL27A1-202ENST00000451716 CHRNB4P30926 498 aa10.07□□□□□ -0.8
COL27A1-202ENST00000451716 PLA2G5P39877 138 aa10.07□□□□□ -0.8
COL27A1-202ENST00000451716 RPL23AP62750 156 aaKnown RBP10.07□□□□□ -0.8
COL27A1-202ENST00000451716 BAXQ07812 192 aa10.07□□□□□ -0.8
COL27A1-202ENST00000451716 FAM27E3Q08E93 113 aa10.07□□□□□ -0.8
COL27A1-202ENST00000451716 SPANXN5Q5MJ07 72 aa10.07□□□□□ -0.8
COL27A1-202ENST00000451716 IGFL3Q6UXB1 125 aa10.07□□□□□ -0.8
COL27A1-202ENST00000451716 ZNF645Q8N7E2 425 aa10.07□□□□□ -0.8
COL27A1-202ENST00000451716 STXBP6Q8NFX7 210 aa10.07□□□□□ -0.8
COL27A1-202ENST00000451716 NINJ1Q92982 152 aa10.07□□□□□ -0.8
COL27A1-202ENST00000451716 ZNF48Q96MX3 618 aaPredicted RBP10.07□□□□□ -0.8
COL27A1-202ENST00000451716 ATP5SQ99766 215 aa10.07□□□□□ -0.8
COL27A1-202ENST00000451716 RSG1Q9BU20 258 aa10.07□□□□□ -0.8
COL27A1-202ENST00000451716 KCNJ16Q9NPI9 418 aa10.07□□□□□ -0.8
COL27A1-202ENST00000451716 PSENENQ9NZ42 101 aa10.07□□□□□ -0.8
COL27A1-202ENST00000451716 LOC102724200A0A096LPH7 203 aaPredicted RBP10.07□□□□□ -0.8
COL27A1-202ENST00000451716 C17orf98A8MV24 154 aa10.07□□□□□ -0.8
COL27A1-202ENST00000451716 BMP5P22003 454 aa10.07□□□□□ -0.8
COL27A1-202ENST00000451716 PRDX2P32119 198 aa10.07□□□□□ -0.8
COL27A1-202ENST00000451716 BRWD1-AS2P59051 145 aa10.07□□□□□ -0.8
COL27A1-202ENST00000451716 RTP5Q14D33 572 aa10.07□□□□□ -0.8
COL27A1-202ENST00000451716 CD300LFQ8TDQ1 290 aa10.07□□□□□ -0.8
COL27A1-202ENST00000451716 LSM10Q969L4 123 aaKnown RBP10.07□□□□□ -0.8
COL27A1-202ENST00000451716 PKDREJQ9NTG1 2253 aa10.07□□□□□ -0.8
COL27A1-202ENST00000451716 IGKV1D-17A0A075B6S4 117 aa10.06□□□□□ -0.8
COL27A1-202ENST00000451716 S1PR2O95136 353 aa10.06□□□□□ -0.8
COL27A1-202ENST00000451716 MMP9P14780 707 aa10.06□□□□□ -0.8
COL27A1-202ENST00000451716 CEBPGP53567 150 aa10.06□□□□□ -0.8
COL27A1-202ENST00000451716 RPS16P62249 146 aaKnown RBP10.06□□□□□ -0.8
COL27A1-202ENST00000451716 HAPLN4Q86UW8 402 aa10.06□□□□□ -0.8
COL27A1-202ENST00000451716 MOGAT3Q86VF5 341 aa10.06□□□□□ -0.8
COL27A1-202ENST00000451716 ZNRF1Q8ND25 227 aa10.06□□□□□ -0.8
COL27A1-202ENST00000451716 OR2V2Q96R30 315 aa10.06□□□□□ -0.8
COL27A1-202ENST00000451716 RAB40CQ96S21 281 aa10.06□□□□□ -0.8
COL27A1-202ENST00000451716 PSG11Q9UQ72 335 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms