RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 ZNF672Q499Z4 452 aaPredicted RBP13.24□□□□□ -0.29
AP000253.1-201ENST00000449339 SPINK9Q5DT21 86 aa13.24□□□□□ -0.29
AP000253.1-201ENST00000449339 CBLN2Q8IUK8 224 aa13.24□□□□□ -0.29
AP000253.1-201ENST00000449339 C1orf87Q8N0U7 546 aa13.24□□□□□ -0.29
AP000253.1-201ENST00000449339 PSMG3Q9BT73 122 aaPredicted RBP13.24□□□□□ -0.29
AP000253.1-201ENST00000449339 QTRT1Q9BXR0 403 aaKnown RBP13.24□□□□□ -0.29
AP000253.1-201ENST00000449339 HIPK2Q9H2X6 1198 aa13.24□□□□□ -0.29
AP000253.1-201ENST00000449339 IDI2-AS1Q9NZ38 188 aa13.24□□□□□ -0.29
AP000253.1-201ENST00000449339 ZMAT5Q9UDW3 170 aaKnown RBP13.24□□□□□ -0.29
AP000253.1-201ENST00000449339 hADV38S2A0JD32 116 aa13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 FAM90A9PA6NNJ1 464 aa13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 GNLYP22749 145 aa13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 OR2B8PP59922 312 aa13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 PRAMEF5Q5TYX0 476 aa13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 SP5Q6BEB4 398 aaPredicted RBP13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 VKORC1L1Q8N0U8 176 aa13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 CLRN3Q8NCR9 226 aa13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 DDB2Q92466 427 aa13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 RARRES2Q99969 163 aa13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 PARD6GQ9BYG4 376 aaPredicted RBP13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 SLC35B3Q9H1N7 401 aa13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 KIAA1456Q9P272 454 aa13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 SLC25A10Q9UBX3 287 aaPredicted RBP13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 DOCK11Q5JSL3 2073 aa13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 UBE2L5PA0A1B0GUS4 154 aa13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 NQO2P16083 231 aa13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 KIR2DS2P43631 304 aa13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 AARDQ4LEZ3 155 aa13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 DHRS7BQ6IAN0 325 aaPredicted RBP13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 LYG1Q8N1E2 194 aa13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 ZNF439Q8NDP4 499 aa13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 ZNF251Q9BRH9 671 aa13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 LINC00312Q9Y6C7 94 aa13.23□□□□□ -0.29
AP000253.1-201ENST00000449339 CFAP46Q8IYW2 2715 aa13.22□□□□□ -0.29
AP000253.1-201ENST00000449339 IGSF10Q6WRI0 2623 aa13.22□□□□□ -0.29
AP000253.1-201ENST00000449339 IGHV1-69-2A0A0G2JMI3 117 aa13.22□□□□□ -0.29
AP000253.1-201ENST00000449339 RBFOX3A6NFN3 312 aa13.22□□□□□ -0.29
AP000253.1-201ENST00000449339 IFNA17P01571 189 aa13.22□□□□□ -0.29
AP000253.1-201ENST00000449339 GNG10P50151 68 aa13.22□□□□□ -0.29
AP000253.1-201ENST00000449339 ERVK-16P61578 105 aa13.22□□□□□ -0.29
AP000253.1-201ENST00000449339 SERF2P84101 59 aa13.22□□□□□ -0.29
AP000253.1-201ENST00000449339 TAF15Q92804 592 aaKnown RBP eCLIP13.22□□□□□ -0.29
AP000253.1-201ENST00000449339 SMDT1Q9H4I9 107 aa13.22□□□□□ -0.29
AP000253.1-201ENST00000449339 RPRMQ9NS64 109 aa13.22□□□□□ -0.29
AP000253.1-201ENST00000449339 RALYQ9UKM9 306 aaKnown RBP13.22□□□□□ -0.29
AP000253.1-201ENST00000449339 PMS2P5A8MQ11 134 aa13.21□□□□□ -0.29
AP000253.1-201ENST00000449339 MRPS11P82912 194 aaKnown RBP13.21□□□□□ -0.29
AP000253.1-201ENST00000449339 TMEM30BQ3MIR4 351 aa13.21□□□□□ -0.29
AP000253.1-201ENST00000449339 OR10P1Q8NGE3 313 aa13.21□□□□□ -0.29
AP000253.1-201ENST00000449339 OR4A16Q8NH70 328 aa13.21□□□□□ -0.29
AP000253.1-201ENST00000449339 OR4S2Q8NH73 311 aa13.21□□□□□ -0.29
AP000253.1-201ENST00000449339 PINX1Q96BK5 328 aaKnown RBP13.21□□□□□ -0.29
AP000253.1-201ENST00000449339 FAM122AQ96E09 287 aa13.21□□□□□ -0.29
AP000253.1-201ENST00000449339 VSIRQ9H7M9 311 aa13.21□□□□□ -0.29
AP000253.1-201ENST00000449339 RPUSD1Q9UJJ7 312 aaKnown RBP13.21□□□□□ -0.29
AP000253.1-201ENST00000449339 TMEM8BA6NDV4 472 aa13.21□□□□□ -0.29
AP000253.1-201ENST00000449339 TNFRSF13BO14836 293 aaPredicted RBP13.21□□□□□ -0.29
AP000253.1-201ENST00000449339 RAB2AP61019 212 aa13.21□□□□□ -0.29
AP000253.1-201ENST00000449339 RPL31P62899 125 aaKnown RBP13.21□□□□□ -0.29
AP000253.1-201ENST00000449339 ATP6V1FQ16864 119 aa13.21□□□□□ -0.29
AP000253.1-201ENST00000449339 TMEM204Q9BSN7 226 aa13.21□□□□□ -0.29
AP000253.1-201ENST00000449339 CTSZQ9UBR2 303 aa13.21□□□□□ -0.29
AP000253.1-201ENST00000449339 HBE1P02100 147 aa13.2□□□□□ -0.3
AP000253.1-201ENST00000449339 COL8A2P25067 703 aa13.2□□□□□ -0.3
AP000253.1-201ENST00000449339 RBMXL1Q96E39 390 aaKnown RBP13.2□□□□□ -0.3
AP000253.1-201ENST00000449339 TMEM140Q9NV12 185 aa13.2□□□□□ -0.3
AP000253.1-201ENST00000449339 TRAV1-1A0A0B4J248 108 aa13.2□□□□□ -0.3
AP000253.1-201ENST00000449339 THBS3P49746 956 aa13.2□□□□□ -0.3
AP000253.1-201ENST00000449339 RPS16P62249 146 aaKnown RBP13.2□□□□□ -0.3
AP000253.1-201ENST00000449339 MEF2CQ06413 473 aaPredicted RBP13.2□□□□□ -0.3
AP000253.1-201ENST00000449339 HAGHQ16775 308 aa13.2□□□□□ -0.3
AP000253.1-201ENST00000449339 SLC25A48Q6ZT89 311 aaKnown RBP13.2□□□□□ -0.3
AP000253.1-201ENST00000449339 TMEM147Q9BVK8 224 aa13.2□□□□□ -0.3
AP000253.1-201ENST00000449339 GAL3ST2Q9H3Q3 398 aa13.2□□□□□ -0.3
AP000253.1-201ENST00000449339 ZNRD1Q9P1U0 126 aa13.2□□□□□ -0.3
AP000253.1-201ENST00000449339 OR13C7P0DN81 318 aa13.19□□□□□ -0.3
AP000253.1-201ENST00000449339 CCL3L1P16619 93 aa13.19□□□□□ -0.3
AP000253.1-201ENST00000449339 SPCS3P61009 180 aa13.19□□□□□ -0.3
AP000253.1-201ENST00000449339 RELBQ01201 579 aa13.19□□□□□ -0.3
AP000253.1-201ENST00000449339 ZNF383Q8NA42 475 aa13.19□□□□□ -0.3
AP000253.1-201ENST00000449339 H1FXQ92522 213 aaKnown RBP13.19□□□□□ -0.3
AP000253.1-201ENST00000449339 TRAV3A0A0B4J244 114 aa13.19□□□□□ -0.3
AP000253.1-201ENST00000449339 GNB2P62879 340 aa13.19□□□□□ -0.3
AP000253.1-201ENST00000449339 HNF4GQ14541 408 aa13.19□□□□□ -0.3
AP000253.1-201ENST00000449339 HFEQ30201 348 aa13.19□□□□□ -0.3
AP000253.1-201ENST00000449339 OR52E5Q8NH55 327 aa13.19□□□□□ -0.3
AP000253.1-201ENST00000449339 ADTRPQ96IZ2 230 aa13.19□□□□□ -0.3
AP000253.1-201ENST00000449339 RHOVQ96L33 236 aa13.19□□□□□ -0.3
AP000253.1-201ENST00000449339 TIMM9Q9Y5J7 89 aa13.19□□□□□ -0.3
AP000253.1-201ENST00000449339 C15orf62A8K5M9 175 aa13.18□□□□□ -0.3
AP000253.1-201ENST00000449339 DVL1O14640 695 aa13.18□□□□□ -0.3
AP000253.1-201ENST00000449339 LY6HO94772 140 aa13.18□□□□□ -0.3
AP000253.1-201ENST00000449339 LY86O95711 162 aa13.18□□□□□ -0.3
AP000253.1-201ENST00000449339 ELLP55199 621 aaPredicted RBP13.18□□□□□ -0.3
AP000253.1-201ENST00000449339 ZNF726P1Q15940 193 aa13.18□□□□□ -0.3
AP000253.1-201ENST00000449339 AKIRIN2Q53H80 203 aa13.18□□□□□ -0.3
AP000253.1-201ENST00000449339 TMEM41BQ5BJD5 291 aa13.18□□□□□ -0.3
AP000253.1-201ENST00000449339 TMEM200BQ69YZ2 307 aa13.18□□□□□ -0.3
AP000253.1-201ENST00000449339 CLDND2Q8NHS1 167 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms