RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 OR10G3Q8NGC4 313 aa7.9□□□□□ -1.14
SYNPO2-204ENST00000448416 ZDHHC16Q969W1 377 aa7.9□□□□□ -1.14
SYNPO2-204ENST00000448416 PEF1Q9UBV8 284 aaKnown RBP7.9□□□□□ -1.14
SYNPO2-204ENST00000448416 A0A1W2PQF6 199 aa7.9□□□□□ -1.14
SYNPO2-204ENST00000448416 GAGE10A6NGK3 116 aa7.9□□□□□ -1.14
SYNPO2-204ENST00000448416 CELA3BP08861 270 aa7.9□□□□□ -1.14
SYNPO2-204ENST00000448416 NPY1RP25929 384 aa7.9□□□□□ -1.14
SYNPO2-204ENST00000448416 G6PCP35575 357 aa7.9□□□□□ -1.14
SYNPO2-204ENST00000448416 TM4SF4P48230 202 aa7.9□□□□□ -1.14
SYNPO2-204ENST00000448416 MKXQ8IYA7 352 aa7.9□□□□□ -1.14
SYNPO2-204ENST00000448416 OR8B3Q8NGG8 313 aa7.9□□□□□ -1.14
SYNPO2-204ENST00000448416 UBALD1Q8TB05 177 aa7.9□□□□□ -1.14
SYNPO2-204ENST00000448416 C18orf32Q8TCD1 76 aa7.9□□□□□ -1.14
SYNPO2-204ENST00000448416 OR8B2Q96RD0 313 aa7.9□□□□□ -1.14
SYNPO2-204ENST00000448416 RPP25Q9BUL9 199 aaKnown RBP7.9□□□□□ -1.14
SYNPO2-204ENST00000448416 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.9□□□□□ -1.14
SYNPO2-204ENST00000448416 SH3BGRL2Q9UJC5 107 aa7.9□□□□□ -1.14
SYNPO2-204ENST00000448416 ZNF391Q9UJN7 358 aa7.9□□□□□ -1.14
SYNPO2-204ENST00000448416 YTHDF2Q9Y5A9 579 aaKnown RBP7.9□□□□□ -1.14
SYNPO2-204ENST00000448416 KIAA1549Q9HCM3 1950 aa7.9□□□□□ -1.15
SYNPO2-204ENST00000448416 TRAPPC2LH3BP13 241 aa7.9□□□□□ -1.15
SYNPO2-204ENST00000448416 CD5LO43866 347 aa7.9□□□□□ -1.15
SYNPO2-204ENST00000448416 IGLV2-14P01704 120 aa7.9□□□□□ -1.15
SYNPO2-204ENST00000448416 ZNF32P17041 273 aa7.9□□□□□ -1.15
SYNPO2-204ENST00000448416 ARL4DP49703 201 aa7.9□□□□□ -1.15
SYNPO2-204ENST00000448416 TBR1Q16650 682 aa7.9□□□□□ -1.15
SYNPO2-204ENST00000448416 Q5PR19 223 aa7.9□□□□□ -1.15
SYNPO2-204ENST00000448416 FAM69BQ5VUD6 431 aa7.9□□□□□ -1.15
SYNPO2-204ENST00000448416 VWA1Q6PCB0 445 aa7.9□□□□□ -1.15
SYNPO2-204ENST00000448416 SLC25A34Q6PIV7 304 aa7.9□□□□□ -1.15
SYNPO2-204ENST00000448416 PLA2G2FQ9BZM2 168 aa7.9□□□□□ -1.15
SYNPO2-204ENST00000448416 DEPPQ9NTK1 212 aa7.9□□□□□ -1.15
SYNPO2-204ENST00000448416 CRIM1Q9NZV1 1036 aa7.9□□□□□ -1.15
SYNPO2-204ENST00000448416 OR4C46A6NHA9 309 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 LRRC30A6NM36 301 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 C9JCJ5 164 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 STAG3L2P0CL84 134 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 STAG3L3P0CL85 134 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 SSTR5P35346 364 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 PDLIM3Q53GG5 364 aaPredicted RBP7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 OR4S2Q8NH73 311 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 ZC2HC1AQ96GY0 325 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 RNASE7Q9H1E1 156 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 HES4Q9HCC6 221 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 PCDH15Q96QU1 1955 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 IGLC1P0CG04 106 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 USF1P22415 310 aaPredicted RBP7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 CD1BP29016 333 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 APOBEC3AP31941 199 aaPredicted RBP7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 GPM6AP51674 278 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 IGFBP7Q16270 282 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 VWC2Q2TAL6 325 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 RNASEKQ6P5S7 137 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 DOLPP1Q86YN1 238 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 ST20Q9HBF5 79 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 ZNF331Q9NQX6 463 aaPredicted RBP7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 SERTAD4Q9NUC0 356 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 COL5A1P20908 1838 aaPredicted RBP7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 GJE1A6NN92 205 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 J3QR06 171 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 RRHO14718 337 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 CLDN14O95500 239 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 GATA2P23769 480 aaPredicted RBP7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 GNG4P50150 75 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 NHLH1Q02575 133 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 ZNF816Q0VGE8 651 aaPredicted RBP7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 TMEM92Q6UXU6 159 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 OR1B1Q8NGR6 318 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 TMEM186Q96B77 213 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 WDR83OSQ9Y284 106 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 HS3ST3A1Q9Y663 406 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 LY96Q9Y6Y9 160 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 G3V4G9 280 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 UCN2Q96RP3 112 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 CLCF1Q9UBD9 225 aa7.89□□□□□ -1.15
SYNPO2-204ENST00000448416 TRGV10A0A0A0MS01 117 aa7.88□□□□□ -1.15
SYNPO2-204ENST00000448416 GOSR1O95249 250 aa7.88□□□□□ -1.15
SYNPO2-204ENST00000448416 SAMD13Q5VXD3 122 aa7.88□□□□□ -1.15
SYNPO2-204ENST00000448416 DRAM1Q8N682 238 aa7.88□□□□□ -1.15
SYNPO2-204ENST00000448416 TMEM70Q9BUB7 260 aa7.88□□□□□ -1.15
SYNPO2-204ENST00000448416 MTCH1Q9NZJ7 389 aa7.88□□□□□ -1.15
SYNPO2-204ENST00000448416 G3V3Y1 287 aa7.88□□□□□ -1.15
SYNPO2-204ENST00000448416 RBPJQ06330 500 aa7.88□□□□□ -1.15
SYNPO2-204ENST00000448416 ZNF718Q3SXZ3 478 aa7.88□□□□□ -1.15
SYNPO2-204ENST00000448416 PRAMEF20Q5VT98 475 aa7.88□□□□□ -1.15
SYNPO2-204ENST00000448416 Q8N7P7 452 aa7.88□□□□□ -1.15
SYNPO2-204ENST00000448416 CHRDL1Q9BU40 450 aa7.88□□□□□ -1.15
SYNPO2-204ENST00000448416 SELENOKQ9Y6D0 94 aa7.88□□□□□ -1.15
SYNPO2-204ENST00000448416 hDV102S1A0JD36 115 aa7.88□□□□□ -1.15
SYNPO2-204ENST00000448416 HELTA6NFD8 242 aa7.88□□□□□ -1.15
SYNPO2-204ENST00000448416 C2orf70A6NJV1 201 aa7.88□□□□□ -1.15
SYNPO2-204ENST00000448416 B4GALT1P15291 398 aa7.88□□□□□ -1.15
SYNPO2-204ENST00000448416 TNFRSF4P43489 277 aa7.88□□□□□ -1.15
SYNPO2-204ENST00000448416 SLAQ13239 276 aa7.88□□□□□ -1.15
SYNPO2-204ENST00000448416 CENPWQ5EE01 88 aa7.88□□□□□ -1.15
SYNPO2-204ENST00000448416 PQLC2Q6ZP29 291 aa7.88□□□□□ -1.15
SYNPO2-204ENST00000448416 CLEC5AQ9NY25 188 aa7.88□□□□□ -1.15
SYNPO2-204ENST00000448416 LRP4O75096 1905 aa7.88□□□□□ -1.15
SYNPO2-204ENST00000448416 MGST1P10620 155 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-204ENST00000448416 GCHFRP30047 84 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms