RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 DOK5Q9P104 306 aa12.25□□□□□ -0.45
SF1-211ENST00000448404 ANKHD1Q8IWZ3 2542 aaKnown RBP12.25□□□□□ -0.45
SF1-211ENST00000448404 OR2C1O95371 312 aa12.24□□□□□ -0.45
SF1-211ENST00000448404 DUTP33316 252 aaKnown RBP12.24□□□□□ -0.45
SF1-211ENST00000448404 GLRXP35754 106 aa12.24□□□□□ -0.45
SF1-211ENST00000448404 LOXL3P58215 753 aa12.24□□□□□ -0.45
SF1-211ENST00000448404 SSX2Q16385 188 aa12.24□□□□□ -0.45
SF1-211ENST00000448404 ZNF787Q6DD87 383 aa12.24□□□□□ -0.45
SF1-211ENST00000448404 PRR7Q8TB68 274 aa12.24□□□□□ -0.45
SF1-211ENST00000448404 LRFN3Q9BTN0 628 aa12.24□□□□□ -0.45
SF1-211ENST00000448404 WDR61Q9GZS3 305 aaKnown RBP12.24□□□□□ -0.45
SF1-211ENST00000448404 P0C879 139 aa12.24□□□□□ -0.45
SF1-211ENST00000448404 SCNM1Q9BWG6 230 aa12.24□□□□□ -0.45
SF1-211ENST00000448404 HSPB7Q9UBY9 170 aa12.24□□□□□ -0.45
SF1-211ENST00000448404 RAI1Q7Z5J4 1906 aaPredicted RBP12.24□□□□□ -0.45
SF1-211ENST00000448404 RPS23P62266 143 aaKnown RBP12.24□□□□□ -0.45
SF1-211ENST00000448404 CATR1Q13166 79 aa12.24□□□□□ -0.45
SF1-211ENST00000448404 LRRC75BQ2VPJ9 315 aa12.24□□□□□ -0.45
SF1-211ENST00000448404 CYB5R2Q6BCY4 276 aa12.24□□□□□ -0.45
SF1-211ENST00000448404 TCF23Q7RTU1 214 aa12.24□□□□□ -0.45
SF1-211ENST00000448404 ABHD12Q8N2K0 398 aa12.24□□□□□ -0.45
SF1-211ENST00000448404 CA5BP1Q8WTZ4 195 aa12.24□□□□□ -0.45
SF1-211ENST00000448404 TAF15Q92804 592 aaKnown RBP eCLIP12.24□□□□□ -0.451e-8■■□□□ 12.7
SF1-211ENST00000448404 SSX3Q99909 188 aa12.24□□□□□ -0.45
SF1-211ENST00000448404 IFI27L2Q9H2X8 130 aa12.24□□□□□ -0.45
SF1-211ENST00000448404 DFFBO76075 338 aa12.23□□□□□ -0.45
SF1-211ENST00000448404 MMP9P14780 707 aa12.23□□□□□ -0.45
SF1-211ENST00000448404 CT45A1Q5HYN5 189 aa12.23□□□□□ -0.45
SF1-211ENST00000448404 SPNS3Q6ZMD2 512 aa12.23□□□□□ -0.45
SF1-211ENST00000448404 CT45A3Q8NHU0 189 aa12.23□□□□□ -0.45
SF1-211ENST00000448404 FAM57AQ8TBR7 257 aa12.23□□□□□ -0.45
SF1-211ENST00000448404 RND1Q92730 232 aa12.23□□□□□ -0.45
SF1-211ENST00000448404 FAM122AQ96E09 287 aa12.23□□□□□ -0.45
SF1-211ENST00000448404 HINT2Q9BX68 163 aa12.23□□□□□ -0.45
SF1-211ENST00000448404 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.23□□□□□ -0.45
SF1-211ENST00000448404 CALYQ9NYX4 217 aa12.23□□□□□ -0.45
SF1-211ENST00000448404 SMCO3A2RU48 225 aa12.23□□□□□ -0.45
SF1-211ENST00000448404 DPRXA6NFQ7 191 aa12.23□□□□□ -0.45
SF1-211ENST00000448404 IFNL4K9M1U5 179 aa12.23□□□□□ -0.45
SF1-211ENST00000448404 TMPRSS2O15393 492 aa12.23□□□□□ -0.45
SF1-211ENST00000448404 HIST1H1BP16401 226 aaKnown RBP12.23□□□□□ -0.45
SF1-211ENST00000448404 MDKP21741 143 aaPredicted RBP12.23□□□□□ -0.45
SF1-211ENST00000448404 CD200P41217 278 aa12.23□□□□□ -0.45
SF1-211ENST00000448404 C17orf58Q2M2W7 97 aa12.23□□□□□ -0.45
SF1-211ENST00000448404 PRAMEF5Q5TYX0 476 aa12.23□□□□□ -0.45
SF1-211ENST00000448404 TMEM14EPQ6UXP3 125 aa12.23□□□□□ -0.45
SF1-211ENST00000448404 ZNF429Q86V71 674 aa12.23□□□□□ -0.45
SF1-211ENST00000448404 MALSU1Q96EH3 234 aa12.23□□□□□ -0.45
SF1-211ENST00000448404 LURAP1Q96LR2 239 aa12.23□□□□□ -0.45
SF1-211ENST00000448404 GPR61Q9BZJ8 451 aa12.23□□□□□ -0.45
SF1-211ENST00000448404 KIAA1456Q9P272 454 aa12.23□□□□□ -0.45
SF1-211ENST00000448404 A0A087X0M5 115 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 A0A1B0GX30 115 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 BTBD17A6NE02 478 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 RNF212BA8MTL3 300 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 SLC25A6P12236 298 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 FGF7P21781 194 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 DDTP30046 118 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 CASP6P55212 293 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 TAS2R60P59551 318 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 BSPH1Q075Z2 132 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 CLEC12BQ2HXU8 276 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 ZNF674Q2M3X9 581 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 SP5Q6BEB4 398 aaPredicted RBP12.22□□□□□ -0.45
SF1-211ENST00000448404 IGF2-ASQ6U949 168 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 HEPN1Q6WQI6 88 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 LYG1Q8N1E2 194 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 MISP3Q96FF7 219 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 RRHO14718 337 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 MGST3O14880 152 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 FCN3O75636 299 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 TAGLN2P37802 199 aaKnown RBP12.22□□□□□ -0.45
SF1-211ENST00000448404 HBG1P69891 147 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 HBG2P69892 147 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 DLK1P80370 383 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 TLE4Q04727 773 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 GFRALQ6UXV0 394 aa12.22□□□□□ -0.45
SF1-211ENST00000448404 NAV3Q8IVL0 2385 aa12.21□□□□□ -0.45
SF1-211ENST00000448404 PMS2P5A8MQ11 134 aa12.21□□□□□ -0.45
SF1-211ENST00000448404 MKRN2OSH3BPM6 223 aa12.21□□□□□ -0.45
SF1-211ENST00000448404 CEACAM8P31997 349 aaPredicted RBP12.21□□□□□ -0.45
SF1-211ENST00000448404 REG1BP48304 166 aa12.21□□□□□ -0.45
SF1-211ENST00000448404 REC114Q7Z4M0 266 aa12.21□□□□□ -0.45
SF1-211ENST00000448404 SPACA3Q8IXA5 215 aa12.21□□□□□ -0.45
SF1-211ENST00000448404 TMEM204Q9BSN7 226 aa12.21□□□□□ -0.45
SF1-211ENST00000448404 AURKAIP1Q9NWT8 199 aaPredicted RBP12.21□□□□□ -0.45
SF1-211ENST00000448404 HRNRQ86YZ3 2850 aaPredicted RBP12.21□□□□□ -0.45
SF1-211ENST00000448404 SAA2-SAA4A0A096LPE2 208 aa12.21□□□□□ -0.46
SF1-211ENST00000448404 MAP1LC3B2A6NCE7 125 aa12.21□□□□□ -0.46
SF1-211ENST00000448404 LHBP01229 141 aa12.21□□□□□ -0.46
SF1-211ENST00000448404 THBDP07204 575 aa12.21□□□□□ -0.46
SF1-211ENST00000448404 SAA2P0DJI9 122 aaPredicted RBP12.21□□□□□ -0.46
SF1-211ENST00000448404 CCL3L1P16619 93 aa12.21□□□□□ -0.46
SF1-211ENST00000448404 TIMP3P35625 211 aa12.21□□□□□ -0.46
SF1-211ENST00000448404 SNX22Q96L94 193 aa12.21□□□□□ -0.46
SF1-211ENST00000448404 MAP1LC3BQ9GZQ8 125 aa12.21□□□□□ -0.46
SF1-211ENST00000448404 TRAV38-1A0A0B4J264 116 aa12.2□□□□□ -0.46
SF1-211ENST00000448404 OR4A8P0C604 315 aa12.2□□□□□ -0.46
SF1-211ENST00000448404 MSMO1Q15800 293 aa12.2□□□□□ -0.46
SF1-211ENST00000448404 USF2Q15853 346 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms