RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 IGHMP01871 453 aa6.66□□□□□ -1.34
NEDD9-204ENST00000448183 IL9P15248 144 aa6.66□□□□□ -1.34
NEDD9-204ENST00000448183 EGR1P18146 543 aa6.66□□□□□ -1.34
NEDD9-204ENST00000448183 ANOS1P23352 680 aa6.66□□□□□ -1.34
NEDD9-204ENST00000448183 FCGR2BP31994 310 aaPredicted RBP6.66□□□□□ -1.34
NEDD9-204ENST00000448183 CENPWQ5EE01 88 aa6.66□□□□□ -1.34
NEDD9-204ENST00000448183 TMEM136Q6ZRR5 245 aa6.66□□□□□ -1.34
NEDD9-204ENST00000448183 SLC22A18ASQ8N1D0 253 aa6.66□□□□□ -1.34
NEDD9-204ENST00000448183 GALNT14Q96FL9 552 aa6.66□□□□□ -1.34
NEDD9-204ENST00000448183 METTL26Q96S19 204 aa6.66□□□□□ -1.34
NEDD9-204ENST00000448183 GSN-AS1Q9NRJ2 163 aa6.66□□□□□ -1.34
NEDD9-204ENST00000448183 PEF1Q9UBV8 284 aaKnown RBP6.66□□□□□ -1.34
NEDD9-204ENST00000448183 TRAV30A0A087WSZ9 112 aa6.65□□□□□ -1.34
NEDD9-204ENST00000448183 SS18L1O75177 396 aaPredicted RBP6.65□□□□□ -1.34
NEDD9-204ENST00000448183 NPBWR2P48146 333 aa6.65□□□□□ -1.34
NEDD9-204ENST00000448183 MFAP4P55083 255 aa6.65□□□□□ -1.34
NEDD9-204ENST00000448183 SLC25A53Q5H9E4 307 aa6.65□□□□□ -1.34
NEDD9-204ENST00000448183 EBLN2Q6P2I7 272 aa6.65□□□□□ -1.34
NEDD9-204ENST00000448183 SYT8Q8NBV8 401 aa6.65□□□□□ -1.34
NEDD9-204ENST00000448183 CRISPLD2Q9H0B8 497 aa6.65□□□□□ -1.34
NEDD9-204ENST00000448183 HILPDAQ9Y5L2 63 aa6.65□□□□□ -1.34
NEDD9-204ENST00000448183 LRRC37AA6NMS7 1700 aa6.65□□□□□ -1.34
NEDD9-204ENST00000448183 C17orf51A8MQB3 221 aa6.65□□□□□ -1.34
NEDD9-204ENST00000448183 GREM1O60565 184 aa6.65□□□□□ -1.34
NEDD9-204ENST00000448183 SRP19P09132 144 aaKnown RBP6.65□□□□□ -1.34
NEDD9-204ENST00000448183 MTURNQ8N3F0 131 aa6.65□□□□□ -1.34
NEDD9-204ENST00000448183 WNT5BQ9H1J7 359 aa6.65□□□□□ -1.34
NEDD9-204ENST00000448183 FOXJ2Q9P0K8 574 aa6.65□□□□□ -1.34
NEDD9-204ENST00000448183 F11RQ9Y624 299 aaKnown RBP6.65□□□□□ -1.34
NEDD9-204ENST00000448183 ZNF638Q14966 1978 aaKnown RBP6.65□□□□□ -1.34
NEDD9-204ENST00000448183 ZNF729A6NN14 1252 aaPredicted RBP6.65□□□□□ -1.35
NEDD9-204ENST00000448183 PATE3B3GLJ2 98 aa6.65□□□□□ -1.35
NEDD9-204ENST00000448183 ZNHIT1O43257 154 aa6.65□□□□□ -1.35
NEDD9-204ENST00000448183 GDF9O60383 454 aa6.65□□□□□ -1.35
NEDD9-204ENST00000448183 HBBP68871 147 aa6.65□□□□□ -1.35
NEDD9-204ENST00000448183 PSG9Q00887 426 aa6.65□□□□□ -1.35
NEDD9-204ENST00000448183 EGR4Q05215 589 aa6.65□□□□□ -1.35
NEDD9-204ENST00000448183 TMEM30BQ3MIR4 351 aa6.65□□□□□ -1.35
NEDD9-204ENST00000448183 TM4SF20Q53R12 229 aa6.65□□□□□ -1.35
NEDD9-204ENST00000448183 ASPHD2Q6ICH7 369 aa6.65□□□□□ -1.35
NEDD9-204ENST00000448183 FAM53AQ6NSI3 398 aaPredicted RBP6.65□□□□□ -1.35
NEDD9-204ENST00000448183 BIVMQ86UB2 503 aa6.65□□□□□ -1.35
NEDD9-204ENST00000448183 SSBP3Q9BWW4 388 aaPredicted RBP6.65□□□□□ -1.35
NEDD9-204ENST00000448183 PHLDA3Q9Y5J5 127 aa6.65□□□□□ -1.35
NEDD9-204ENST00000448183 QSER1Q2KHR3 1735 aa6.65□□□□□ -1.35
NEDD9-204ENST00000448183 A1L4Q6 167 aa6.65□□□□□ -1.35
NEDD9-204ENST00000448183 PRR33A8MZF0 331 aa6.65□□□□□ -1.35
NEDD9-204ENST00000448183 NDUFA2O43678 99 aa6.65□□□□□ -1.35
NEDD9-204ENST00000448183 NPIPB7O75200 414 aa6.65□□□□□ -1.35
NEDD9-204ENST00000448183 LGALS3P17931 250 aaKnown RBP6.65□□□□□ -1.35
NEDD9-204ENST00000448183 IGLV3-21P80748 117 aaPredicted RBP6.65□□□□□ -1.35
NEDD9-204ENST00000448183 TTC32Q5I0X7 151 aa6.65□□□□□ -1.35
NEDD9-204ENST00000448183 ARL6IP6Q8N6S5 226 aa6.65□□□□□ -1.35
NEDD9-204ENST00000448183 SMRP1Q8NCR6 262 aa6.65□□□□□ -1.35
NEDD9-204ENST00000448183 CHRNA10Q9GZZ6 450 aa6.65□□□□□ -1.35
NEDD9-204ENST00000448183 UBTD1Q9HAC8 227 aa6.65□□□□□ -1.35
NEDD9-204ENST00000448183 RAXQ9Y2V3 346 aa6.65□□□□□ -1.35
NEDD9-204ENST00000448183 LOC105371267A0A1B0GV96 52 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 C7orf71A4D174 169 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 RNF222A6NCQ9 220 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 AHRRA9YTQ3 701 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 TMEM229AB2RXF0 380 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 CX3CL1P78423 397 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 HERPUD1Q15011 391 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 JOSD1Q15040 202 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-204ENST00000448183 ZNF146Q15072 292 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 C10orf128Q5T292 105 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 C1orf185Q5T7R7 199 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 MBNL2Q5VZF2 373 aaKnown RBP6.64□□□□□ -1.35
NEDD9-204ENST00000448183 OR4D5Q8NGN0 318 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 OR4C13Q8NGP0 309 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 KCNS1Q96KK3 526 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 ZDHHC8Q9ULC8 765 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 AUP1Q9Y679 476 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 FOCADQ5VW36 1801 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 DOPEY2Q9Y3R5 2298 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 A0A087WWC5 75 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 RRHO14718 337 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 FAM106CPP0CH98 169 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 TAS2R60P59551 318 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 ATRAIDQ6UW56 229 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 SP7Q8TDD2 431 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-204ENST00000448183 NPIPB3Q92617 1050 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 WDYHV1Q96HA8 205 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 SGK494Q96LW2 274 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 OR11H12B2RN74 326 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 FGF5P12034 268 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 HOXA5P20719 270 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 UCP1P25874 307 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 SHISA5Q8N114 240 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 OR11H1Q8NG94 326 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 OR11H2Q8NH07 326 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 EAF1Q96JC9 268 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-204ENST00000448183 OPN3Q9H1Y3 402 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-204ENST00000448183 AKIRIN1Q9H9L7 192 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-204ENST00000448183 HS3ST3B1Q9Y662 390 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 ADRA2AP08913 450 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 GPX4P36969 197 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-204ENST00000448183 DNM1P46Q6ZS02 220 aa6.64□□□□□ -1.35
NEDD9-204ENST00000448183 GOLT1AQ6ZVE7 132 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms