RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 TNRC6BQ9UPQ9 1833 aaKnown RBP16.16■□□□□ 0.18
HMGA1-205ENST00000447654 ODAMA1E959 279 aa16.16■□□□□ 0.18
HMGA1-205ENST00000447654 C5orf63A6NC05 138 aa16.16■□□□□ 0.18
HMGA1-205ENST00000447654 MLF1P58340 268 aa16.16■□□□□ 0.18
HMGA1-205ENST00000447654 SPANXN5Q5MJ07 72 aa16.16■□□□□ 0.18
HMGA1-205ENST00000447654 MMD2Q8IY49 270 aa16.16■□□□□ 0.18
HMGA1-205ENST00000447654 OR8B3Q8NGG8 313 aa16.16■□□□□ 0.18
HMGA1-205ENST00000447654 RDH5Q92781 318 aa16.16■□□□□ 0.18
HMGA1-205ENST00000447654 BORCS8Q96FH0 119 aa16.16■□□□□ 0.18
HMGA1-205ENST00000447654 OR8B2Q96RD0 313 aa16.16■□□□□ 0.18
HMGA1-205ENST00000447654 HES4Q9HCC6 221 aa16.16■□□□□ 0.18
HMGA1-205ENST00000447654 MYO7BQ6PIF6 2116 aa16.16■□□□□ 0.18
HMGA1-205ENST00000447654 SCRG1O75711 98 aa16.16■□□□□ 0.18
HMGA1-205ENST00000447654 OR10J4P0C629 311 aa16.16■□□□□ 0.18
HMGA1-205ENST00000447654 CEACAM3P40198 252 aa16.16■□□□□ 0.18
HMGA1-205ENST00000447654 CX3CL1P78423 397 aa16.16■□□□□ 0.18
HMGA1-205ENST00000447654 Q6ZRM9 215 aa16.16■□□□□ 0.18
HMGA1-205ENST00000447654 GTF2H5Q6ZYL4 71 aa16.16■□□□□ 0.18
HMGA1-205ENST00000447654 ZNF439Q8NDP4 499 aa16.16■□□□□ 0.18
HMGA1-205ENST00000447654 OCC1Q8TAD7 63 aa16.16■□□□□ 0.18
HMGA1-205ENST00000447654 TRBV20OR9-2A0A075B6H5 130 aa16.15■□□□□ 0.18
HMGA1-205ENST00000447654 PATE3B3GLJ2 98 aa16.15■□□□□ 0.18
HMGA1-205ENST00000447654 SMIM17P0DL12 118 aa16.15■□□□□ 0.18
HMGA1-205ENST00000447654 VWC2Q2TAL6 325 aa16.15■□□□□ 0.18
HMGA1-205ENST00000447654 MRPL54Q6P161 138 aaKnown RBP16.15■□□□□ 0.18
HMGA1-205ENST00000447654 TMEM136Q6ZRR5 245 aa16.15■□□□□ 0.18
HMGA1-205ENST00000447654 RCHY1Q96PM5 261 aa16.15■□□□□ 0.18
HMGA1-205ENST00000447654 DERL1Q9BUN8 251 aa16.15■□□□□ 0.18
HMGA1-205ENST00000447654 WASHC3Q9Y3C0 194 aa16.15■□□□□ 0.18
HMGA1-205ENST00000447654 OR51B2Q9Y5P1 312 aa16.15■□□□□ 0.18
HMGA1-205ENST00000447654 IGKV1-27A0A075B6S5 117 aa16.14■□□□□ 0.17
HMGA1-205ENST00000447654 ATP5G3P48201 142 aa16.14■□□□□ 0.17
HMGA1-205ENST00000447654 MFAP5Q13361 173 aa16.14■□□□□ 0.17
HMGA1-205ENST00000447654 OCIAD1Q9NX40 245 aa16.14■□□□□ 0.17
HMGA1-205ENST00000447654 CGAP01215 116 aa16.14■□□□□ 0.17
HMGA1-205ENST00000447654 MYBPHQ13203 477 aa16.14■□□□□ 0.17
HMGA1-205ENST00000447654 PRAMEF20Q5VT98 475 aa16.14■□□□□ 0.17
HMGA1-205ENST00000447654 BRICD5Q6PL45 260 aa16.14■□□□□ 0.17
HMGA1-205ENST00000447654 NPCDR1Q9BY65 106 aa16.14■□□□□ 0.17
HMGA1-205ENST00000447654 BDP1A6H8Y1 2624 aa16.13■□□□□ 0.17
HMGA1-205ENST00000447654 CRYAAP02489 173 aa16.13■□□□□ 0.17
HMGA1-205ENST00000447654 UBE2G1P62253 170 aa16.13■□□□□ 0.17
HMGA1-205ENST00000447654 UFSP1Q6NVU6 142 aa16.13■□□□□ 0.17
HMGA1-205ENST00000447654 DUSP23Q9BVJ7 150 aa16.13■□□□□ 0.17
HMGA1-205ENST00000447654 SHISA8B8ZZ34 492 aa16.13■□□□□ 0.17
HMGA1-205ENST00000447654 F5H5K5 113 aa16.13■□□□□ 0.17
HMGA1-205ENST00000447654 NUDT3O95989 172 aa16.13■□□□□ 0.17
HMGA1-205ENST00000447654 IGFBP7Q16270 282 aa16.13■□□□□ 0.17
HMGA1-205ENST00000447654 TMEM42Q69YG0 159 aa16.13■□□□□ 0.17
HMGA1-205ENST00000447654 ST6GALNAC3Q8NDV1 305 aa16.13■□□□□ 0.17
HMGA1-205ENST00000447654 OR2Y1Q8NGV0 311 aa16.13■□□□□ 0.17
HMGA1-205ENST00000447654 SPTSSAQ969W0 71 aa16.13■□□□□ 0.17
HMGA1-205ENST00000447654 PSG11Q9UQ72 335 aa16.13■□□□□ 0.17
HMGA1-205ENST00000447654 IGKV1-12A0A0C4DH73 117 aa16.12■□□□□ 0.17
HMGA1-205ENST00000447654 FAM181BA6NEQ2 426 aa16.12■□□□□ 0.17
HMGA1-205ENST00000447654 C19orf67A6NJJ6 358 aa16.12■□□□□ 0.17
HMGA1-205ENST00000447654 SAP30O75446 220 aa16.12■□□□□ 0.17
HMGA1-205ENST00000447654 IGKV1D-12P01611 117 aa16.12■□□□□ 0.17
HMGA1-205ENST00000447654 PSG2P11465 335 aa16.12■□□□□ 0.17
HMGA1-205ENST00000447654 GUCA1AP43080 201 aaPredicted RBP16.12■□□□□ 0.17
HMGA1-205ENST00000447654 TGFBR3Q03167 851 aa16.12■□□□□ 0.17
HMGA1-205ENST00000447654 CFAP161Q6P656 301 aa16.12■□□□□ 0.17
HMGA1-205ENST00000447654 UBALD2Q8IYN6 164 aa16.12■□□□□ 0.17
HMGA1-205ENST00000447654 ATOH7Q8N100 152 aa16.12■□□□□ 0.17
HMGA1-205ENST00000447654 DOCK11Q5JSL3 2073 aa16.12■□□□□ 0.17
HMGA1-205ENST00000447654 PGPEP1LA6NFU8 196 aa16.11■□□□□ 0.17
HMGA1-205ENST00000447654 M0R135 149 aa16.11■□□□□ 0.17
HMGA1-205ENST00000447654 TLX3O43711 291 aaPredicted RBP16.11■□□□□ 0.17
HMGA1-205ENST00000447654 AMY1AP04745 511 aa16.11■□□□□ 0.17
HMGA1-205ENST00000447654 FUT6P51993 359 aa16.11■□□□□ 0.17
HMGA1-205ENST00000447654 PMP22Q01453 160 aa16.11■□□□□ 0.17
HMGA1-205ENST00000447654 SLC25A34Q6PIV7 304 aa16.11■□□□□ 0.17
HMGA1-205ENST00000447654 ZNF799Q96GE5 643 aa16.11■□□□□ 0.17
HMGA1-205ENST00000447654 RARRES3Q9UL19 164 aa16.11■□□□□ 0.17
HMGA1-205ENST00000447654 ATP23Q9Y6H3 246 aa16.11■□□□□ 0.17
HMGA1-205ENST00000447654 RALGAPA1Q6GYQ0 2036 aa16.11■□□□□ 0.17
HMGA1-205ENST00000447654 GAGE10A6NGK3 116 aa16.11■□□□□ 0.17
HMGA1-205ENST00000447654 CFIP05156 583 aa16.11■□□□□ 0.17
HMGA1-205ENST00000447654 EGR1P18146 543 aa16.11■□□□□ 0.17
HMGA1-205ENST00000447654 FOXL2NBQ6ZUU3 175 aa16.11■□□□□ 0.17
HMGA1-205ENST00000447654 OR1B1Q8NGR6 318 aa16.11■□□□□ 0.17
HMGA1-205ENST00000447654 C11orf52Q96A22 123 aa16.11■□□□□ 0.17
HMGA1-205ENST00000447654 SARAFQ96BY9 339 aa16.11■□□□□ 0.17
HMGA1-205ENST00000447654 ZNF391Q9UJN7 358 aa16.11■□□□□ 0.17
HMGA1-205ENST00000447654 V9GYV3 84 aa16.11■□□□□ 0.17
HMGA1-205ENST00000447654 BMPR1BO00238 502 aa16.1■□□□□ 0.17
HMGA1-205ENST00000447654 NPY1RP25929 384 aa16.1■□□□□ 0.17
HMGA1-205ENST00000447654 SRIP30626 198 aa16.1■□□□□ 0.17
HMGA1-205ENST00000447654 GPR6P46095 362 aaPredicted RBP16.1■□□□□ 0.17
HMGA1-205ENST00000447654 PHYHD1Q5SRE7 291 aa16.1■□□□□ 0.17
HMGA1-205ENST00000447654 NEGR1Q7Z3B1 354 aa16.1■□□□□ 0.17
HMGA1-205ENST00000447654 DTX1Q86Y01 620 aa16.1■□□□□ 0.17
HMGA1-205ENST00000447654 GPHA2Q96T91 129 aa16.1■□□□□ 0.17
HMGA1-205ENST00000447654 COMMD5Q9GZQ3 224 aa16.1■□□□□ 0.17
HMGA1-205ENST00000447654 OR2W1Q9Y3N9 320 aa16.1■□□□□ 0.17
HMGA1-205ENST00000447654 SCTP09683 121 aa16.1■□□□□ 0.17
HMGA1-205ENST00000447654 LCN12Q6JVE5 192 aa16.1■□□□□ 0.17
HMGA1-205ENST00000447654 RASL11AQ6T310 242 aa16.1■□□□□ 0.17
HMGA1-205ENST00000447654 NEUROG1Q92886 237 aa16.1■□□□□ 0.17
HMGA1-205ENST00000447654 ULBP2Q9BZM5 246 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms