RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 VSIG8P0DPA2 414 aa10.05□□□□□ -0.8
FN1-212ENST00000446046 VDAC2P45880 294 aaPredicted RBP10.05□□□□□ -0.8
FN1-212ENST00000446046 CKS2P33552 79 aa10.05□□□□□ -0.8
FN1-212ENST00000446046 TFPI2P48307 235 aa10.05□□□□□ -0.8
FN1-212ENST00000446046 EWSR1Q01844 656 aaKnown RBP eCLIP10.05□□□□□ -0.8
FN1-212ENST00000446046 ZNF345Q14585 488 aa10.05□□□□□ -0.8
FN1-212ENST00000446046 ZNF385CQ66K41 422 aaPredicted RBP10.05□□□□□ -0.8
FN1-212ENST00000446046 LDLRAD3Q86YD5 345 aa10.05□□□□□ -0.8
FN1-212ENST00000446046 VPS25Q9BRG1 176 aa10.05□□□□□ -0.8
FN1-212ENST00000446046 YAE1D1Q9NRH1 226 aa10.05□□□□□ -0.8
FN1-212ENST00000446046 HIST3H3Q16695 136 aa10.05□□□□□ -0.8
FN1-212ENST00000446046 GPR82Q96P67 336 aa10.05□□□□□ -0.8
FN1-212ENST00000446046 KIR2DL4Q99706 377 aa10.05□□□□□ -0.8
FN1-212ENST00000446046 TGFBR1P36897 503 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 WNT5AP41221 380 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 AANATQ16613 207 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 C10orf128Q5T292 105 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 FAM208BQ5VWN6 2430 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 PHOX2AO14813 284 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 FXYD3Q14802 87 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 DTX2Q86UW9 622 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 CLDND2Q8NHS1 167 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 HSPB7Q9UBY9 170 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 TRAV8-7A0A075B6U6 113 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 INSL4Q14641 139 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 LINC01560Q8TB33 94 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 SLC25A28Q96A46 364 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 ZFP30Q9Y2G7 519 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 COL4A1P02462 1669 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 A6NDN8 102 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 SNURFLB1AK76 121 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 NUDT3O95989 172 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 HSPE1P61604 102 aaKnown RBP10.04□□□□□ -0.8
FN1-212ENST00000446046 TOMM20LQ6UXN7 152 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 MEGF10Q96KG7 1140 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 C7orf69Q9H7B7 122 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 PRDM6Q9NQX0 595 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 PCNX3Q9H6A9 2034 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 MARCH11A6NNE9 402 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 NPFFO15130 113 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 LIMS1P48059 325 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 C2CD4CQ8TF44 421 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 PRSS22Q9GZN4 317 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 TNFSF18Q9UNG2 199 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 TRBV5-3A0A0A0MS03 114 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 SEC11BP0C7V7 166 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 DLL3Q9NYJ7 618 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 TGFAP01135 160 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 PRSS12P56730 875 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 SNAI3Q3KNW1 292 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 TCF24Q7RTU0 167 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 CTHRC1Q96CG8 243 aa10.04□□□□□ -0.8
FN1-212ENST00000446046 GEMIN7Q9H840 131 aaKnown RBP10.04□□□□□ -0.8
FN1-212ENST00000446046 PCDH15Q96QU1 1955 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.03□□□□□ -0.8
FN1-212ENST00000446046 A0A1B0GVG6 124 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 PRSS2P07478 247 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 FABP4P15090 132 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 GUCD1Q96NT3 240 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 TMEM140Q9NV12 185 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 SLC16A13Q7RTY0 426 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 LYZL2Q7Z4W2 148 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 FAM216AQ8WUB2 273 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 COL25A1Q9BXS0 654 aaPredicted RBP10.03□□□□□ -0.8
FN1-212ENST00000446046 TMEM222Q9H0R3 208 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 MAP1LC3AQ9H492 121 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 SMUG1Q53HV7 270 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 TMEM70Q9BUB7 260 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 GHRHP01286 108 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 CX3CL1P78423 397 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 SPACA3Q8IXA5 215 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 SRXN1Q9BYN0 137 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 IL17BQ9UHF5 180 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 IL18BPO95998 194 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 MT-ND6P03923 174 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 IGKV3-11P04433 115 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 PNKDQ8N490 385 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 LHFPL6Q9Y693 200 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 EML5Q05BV3 1969 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 BTF3P20290 206 aaKnown RBP10.03□□□□□ -0.8
FN1-212ENST00000446046 MGAT2Q10469 447 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 LHFPL5Q8TAF8 219 aa10.03□□□□□ -0.8
FN1-212ENST00000446046 ALKBH7Q9BT30 221 aaPredicted RBP10.03□□□□□ -0.8
FN1-212ENST00000446046 RCC2Q9P258 522 aaKnown RBP10.03□□□□□ -0.8
FN1-212ENST00000446046 ZNF253O75346 499 aa10.02□□□□□ -0.8
FN1-212ENST00000446046 CEBPEQ15744 281 aa10.02□□□□□ -0.8
FN1-212ENST00000446046 HCP5Q6MZN7 132 aa10.02□□□□□ -0.8
FN1-212ENST00000446046 ALX4Q9H161 411 aaPredicted RBP10.02□□□□□ -0.8
FN1-212ENST00000446046 FBLL1A6NHQ2 334 aaKnown RBP10.02□□□□□ -0.81
FN1-212ENST00000446046 COTL1Q14019 142 aa10.02□□□□□ -0.81
FN1-212ENST00000446046 SAPCD1Q5SSQ6 148 aa10.02□□□□□ -0.81
FN1-212ENST00000446046 RNF151Q2KHN1 245 aa10.02□□□□□ -0.81
FN1-212ENST00000446046 WISP3O95389 354 aaPredicted RBP10.02□□□□□ -0.81
FN1-212ENST00000446046 LEMD1Q68G75 181 aa10.02□□□□□ -0.81
FN1-212ENST00000446046 OSR1Q8TAX0 266 aaPredicted RBP10.02□□□□□ -0.81
FN1-212ENST00000446046 CEBPDP49716 269 aaPredicted RBP10.02□□□□□ -0.81
FN1-212ENST00000446046 TET2Q6N021 2002 aaPredicted RBP10.02□□□□□ -0.81
FN1-212ENST00000446046 RECKO95980 971 aa10.01□□□□□ -0.81
FN1-212ENST00000446046 SPRED2Q7Z698 418 aa10.01□□□□□ -0.81
FN1-212ENST00000446046 WDFY1Q8IWB7 410 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms