RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 SLC25A6P12236 298 aa7.73□□□□□ -1.17
SMPD4P1-203ENST00000443839 SLC25A16P16260 332 aa7.73□□□□□ -1.17
SMPD4P1-203ENST00000443839 NKX2-1P43699 371 aaPredicted RBP7.73□□□□□ -1.17
SMPD4P1-203ENST00000443839 ZNF137PP52743 207 aa7.73□□□□□ -1.17
SMPD4P1-203ENST00000443839 PAX2Q02962 417 aa7.73□□□□□ -1.17
SMPD4P1-203ENST00000443839 DIAPH2-AS1Q14236 149 aa7.73□□□□□ -1.17
SMPD4P1-203ENST00000443839 DEFB113Q30KQ7 82 aa7.73□□□□□ -1.17
SMPD4P1-203ENST00000443839 PRSS54Q6PEW0 395 aa7.73□□□□□ -1.17
SMPD4P1-203ENST00000443839 H2BFWTQ7Z2G1 175 aa7.73□□□□□ -1.17
SMPD4P1-203ENST00000443839 VMO1Q7Z5L0 202 aa7.73□□□□□ -1.17
SMPD4P1-203ENST00000443839 SLC51BQ86UW2 128 aa7.73□□□□□ -1.17
SMPD4P1-203ENST00000443839 INO80EQ8NBZ0 244 aaPredicted RBP7.73□□□□□ -1.17
SMPD4P1-203ENST00000443839 DMBX1Q8NFW5 382 aa7.73□□□□□ -1.17
SMPD4P1-203ENST00000443839 OR4D5Q8NGN0 318 aa7.73□□□□□ -1.17
SMPD4P1-203ENST00000443839 ST6GALNAC6Q969X2 333 aa7.73□□□□□ -1.17
SMPD4P1-203ENST00000443839 R3HDM4Q96D70 268 aa7.73□□□□□ -1.17
SMPD4P1-203ENST00000443839 LINC00052Q96N35 136 aa7.73□□□□□ -1.17
SMPD4P1-203ENST00000443839 PCGF1Q9BSM1 259 aa7.73□□□□□ -1.17
SMPD4P1-203ENST00000443839 OR5AC2Q9NZP5 309 aa7.73□□□□□ -1.17
SMPD4P1-203ENST00000443839 ZANQ9Y493 2812 aa7.73□□□□□ -1.17
SMPD4P1-203ENST00000443839 SVEP1Q4LDE5 3571 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 NBPF19A0A087WUL8 3843 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 H0YIZ8 118 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 BUB1B-PAK6H3BSN5 160 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 K7EPK0 472 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 NXPH3O95157 252 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 FGF2P09038 288 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 NQO2P16083 231 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 USF1P22415 310 aaPredicted RBP7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 KLRD1Q13241 179 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 SMUG1Q53HV7 270 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 CXorf66Q5JRM2 361 aaPredicted RBP7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 DHRS7BQ6IAN0 325 aaPredicted RBP7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 SSX9Q7RTT3 188 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 PDZD9Q8IXQ8 264 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 FAM71E2Q8N5Q1 922 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 RPEQ96AT9 228 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 RNF126Q9BV68 326 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 SLC35D1Q9NTN3 355 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 PFDN2Q9UHV9 154 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 A0A0D9SG52 128 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 KRBOX1C9JBD0 128 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 WRBO00258 174 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 KCNAB3O43448 404 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 RBMXL2O75526 392 aaKnown RBP7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 DEDDO75618 318 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 TOX4O94842 621 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 IGKV1-16P04430 117 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 NUP62P37198 522 aaPredicted RBP7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 DVL1P1P54792 670 aaPredicted RBP7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 ZNF345Q14585 488 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 Q6ZRM9 215 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 HSD17B13Q7Z5P4 300 aaPredicted RBP7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 VKORC1L1Q8N0U8 176 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 EIF4E3Q8N5X7 224 aaKnown RBP7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 OR11H6Q8NGC7 330 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 OR4P4Q8NGL7 312 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 SIRPDQ9H106 197 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 TNFSF18Q9UNG2 199 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 POMT1Q9Y6A1 747 aa7.72□□□□□ -1.17
SMPD4P1-203ENST00000443839 CSMD1Q96PZ7 3565 aa7.71□□□□□ -1.17
SMPD4P1-203ENST00000443839 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.71□□□□□ -1.171e-6■□□□□ 9.9
SMPD4P1-203ENST00000443839 H0YJW9 148 aa7.71□□□□□ -1.18
SMPD4P1-203ENST00000443839 SSSCA1O60232 199 aa7.71□□□□□ -1.18
SMPD4P1-203ENST00000443839 SPDEFO95238 335 aa7.71□□□□□ -1.18
SMPD4P1-203ENST00000443839 HRASP01112 189 aa7.71□□□□□ -1.18
SMPD4P1-203ENST00000443839 HTR1DP28221 377 aa7.71□□□□□ -1.18
SMPD4P1-203ENST00000443839 RAB13P51153 203 aa7.71□□□□□ -1.18
SMPD4P1-203ENST00000443839 POLR2GP62487 172 aaKnown RBP eCLIP7.71□□□□□ -1.18
SMPD4P1-203ENST00000443839 UBA52P62987 128 aaKnown RBP7.71□□□□□ -1.18
SMPD4P1-203ENST00000443839 ANKRD39Q53RE8 183 aa7.71□□□□□ -1.18
SMPD4P1-203ENST00000443839 KCNRGQ8N5I3 272 aa7.71□□□□□ -1.18
SMPD4P1-203ENST00000443839 OR5AN1Q8NGI8 311 aa7.71□□□□□ -1.18
SMPD4P1-203ENST00000443839 RHOVQ96L33 236 aa7.71□□□□□ -1.18
SMPD4P1-203ENST00000443839 NABP2Q9BQ15 211 aa7.71□□□□□ -1.18
SMPD4P1-203ENST00000443839 MAGT1Q9H0U3 335 aa7.71□□□□□ -1.18
SMPD4P1-203ENST00000443839 UNKLQ9H9P5 680 aaKnown RBP7.71□□□□□ -1.18
SMPD4P1-203ENST00000443839 COA4Q9NYJ1 87 aa7.71□□□□□ -1.18
SMPD4P1-203ENST00000443839 POLR3KQ9Y2Y1 108 aaPredicted RBP7.71□□□□□ -1.18
SMPD4P1-203ENST00000443839 A0A1W2PRD5 423 aa7.7□□□□□ -1.18
SMPD4P1-203ENST00000443839 A0A1W2PRF3 423 aa7.7□□□□□ -1.18
SMPD4P1-203ENST00000443839 A0A1W2PRM7 423 aa7.7□□□□□ -1.18
SMPD4P1-203ENST00000443839 E5RGE8 158 aa7.7□□□□□ -1.18
SMPD4P1-203ENST00000443839 TXNL1O43396 289 aa7.7□□□□□ -1.18
SMPD4P1-203ENST00000443839 PITX3O75364 302 aa7.7□□□□□ -1.18
SMPD4P1-203ENST00000443839 OR2F2O95006 317 aa7.7□□□□□ -1.18
SMPD4P1-203ENST00000443839 GAPDHP04406 335 aaKnown RBP7.7□□□□□ -1.18
SMPD4P1-203ENST00000443839 P0C879 139 aa7.7□□□□□ -1.18
SMPD4P1-203ENST00000443839 LYL1P12980 280 aa7.7□□□□□ -1.18
SMPD4P1-203ENST00000443839 PVALBP20472 110 aaPredicted RBP7.7□□□□□ -1.18
SMPD4P1-203ENST00000443839 CEACAM3P40198 252 aa7.7□□□□□ -1.18
SMPD4P1-203ENST00000443839 OR2F1Q13607 317 aa7.7□□□□□ -1.18
SMPD4P1-203ENST00000443839 Q5PR19 223 aa7.7□□□□□ -1.18
SMPD4P1-203ENST00000443839 ACOT7LQ6ZUV0 252 aa7.7□□□□□ -1.18
SMPD4P1-203ENST00000443839 PDPNQ86YL7 162 aa7.7□□□□□ -1.18
SMPD4P1-203ENST00000443839 LRRC75A-AS1Q8N1F1 130 aa7.7□□□□□ -1.18
SMPD4P1-203ENST00000443839 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.7□□□□□ -1.18
SMPD4P1-203ENST00000443839 ST8SIA2Q92186 375 aa7.7□□□□□ -1.18
SMPD4P1-203ENST00000443839 SLC25A32Q9H2D1 315 aa7.7□□□□□ -1.18
SMPD4P1-203ENST00000443839 ZC4H2Q9NQZ6 224 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms