RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 EFCAB10A6NFE3 127 aa10.66□□□□□ -0.7
HMGN1-208ENST00000443046 LINC00473A8K010 186 aa10.66□□□□□ -0.7
HMGN1-208ENST00000443046 CD3GP09693 182 aa10.66□□□□□ -0.7
HMGN1-208ENST00000443046 MAP2K4P45985 399 aa10.66□□□□□ -0.7
HMGN1-208ENST00000443046 KIR2DL5AQ8N109 375 aa10.66□□□□□ -0.7
HMGN1-208ENST00000443046 TMEM217Q8N7C4 229 aa10.66□□□□□ -0.7
HMGN1-208ENST00000443046 KIR2DL5BQ8NHK3 375 aa10.66□□□□□ -0.7
HMGN1-208ENST00000443046 OSR1Q8TAX0 266 aaPredicted RBP10.66□□□□□ -0.7
HMGN1-208ENST00000443046 ACOT12Q8WYK0 555 aa10.66□□□□□ -0.7
HMGN1-208ENST00000443046 FANCD2OSQ96PS1 177 aa10.66□□□□□ -0.7
HMGN1-208ENST00000443046 CABLES2Q9BTV7 478 aa10.66□□□□□ -0.7
HMGN1-208ENST00000443046 ZNF257Q9Y2Q1 563 aa10.66□□□□□ -0.7
HMGN1-208ENST00000443046 TRBV6-7A0A0A0MS04 114 aa10.65□□□□□ -0.7
HMGN1-208ENST00000443046 TEX22C9J3V5 150 aa10.65□□□□□ -0.7
HMGN1-208ENST00000443046 DIRAS3O95661 229 aa10.65□□□□□ -0.7
HMGN1-208ENST00000443046 CRYZL1O95825 349 aa10.65□□□□□ -0.7
HMGN1-208ENST00000443046 DUTP33316 252 aaKnown RBP10.65□□□□□ -0.7
HMGN1-208ENST00000443046 ARL3P36405 182 aa10.65□□□□□ -0.7
HMGN1-208ENST00000443046 ST3GAL4Q11206 333 aa10.65□□□□□ -0.7
HMGN1-208ENST00000443046 TPBGQ13641 420 aa10.65□□□□□ -0.7
HMGN1-208ENST00000443046 CDK10Q15131 360 aa10.65□□□□□ -0.7
HMGN1-208ENST00000443046 FAM106AQ4KMX7 169 aa10.65□□□□□ -0.7
HMGN1-208ENST00000443046 ACSM3Q53FZ2 586 aa10.65□□□□□ -0.7
HMGN1-208ENST00000443046 C10orf55Q5SWW7 151 aa10.65□□□□□ -0.7
HMGN1-208ENST00000443046 BTNL8Q6UX41 500 aa10.65□□□□□ -0.7
HMGN1-208ENST00000443046 C19orf35Q6ZS72 473 aa10.65□□□□□ -0.7
HMGN1-208ENST00000443046 CEACAM19Q7Z692 300 aa10.65□□□□□ -0.7
HMGN1-208ENST00000443046 SLC25A42Q86VD7 318 aa10.65□□□□□ -0.7
HMGN1-208ENST00000443046 SETD9Q8NE22 299 aa10.65□□□□□ -0.7
HMGN1-208ENST00000443046 ARHGAP5-AS1Q96IT6 56 aa10.65□□□□□ -0.7
HMGN1-208ENST00000443046 PECRQ9BY49 303 aa10.65□□□□□ -0.7
HMGN1-208ENST00000443046 FBXL7Q9UJT9 491 aa10.65□□□□□ -0.7
HMGN1-208ENST00000443046 NPIPB5A8MRT5 1133 aa10.64□□□□□ -0.71
HMGN1-208ENST00000443046 FABP7O15540 132 aa10.64□□□□□ -0.71
HMGN1-208ENST00000443046 CRYGCP07315 174 aa10.64□□□□□ -0.71
HMGN1-208ENST00000443046 SAA1P0DJI8 122 aaPredicted RBP10.64□□□□□ -0.71
HMGN1-208ENST00000443046 IGSF11Q5DX21 431 aa10.64□□□□□ -0.71
HMGN1-208ENST00000443046 PLAC9Q5JTB6 97 aa10.64□□□□□ -0.71
HMGN1-208ENST00000443046 OR4A47Q6IF82 309 aa10.64□□□□□ -0.71
HMGN1-208ENST00000443046 CLEC19AQ6UXS0 136 aa10.64□□□□□ -0.71
HMGN1-208ENST00000443046 MMD2Q8IY49 270 aa10.64□□□□□ -0.71
HMGN1-208ENST00000443046 OR2C3Q8N628 320 aa10.64□□□□□ -0.71
HMGN1-208ENST00000443046 OR6M1Q8NGM8 313 aa10.64□□□□□ -0.71
HMGN1-208ENST00000443046 OR1L6Q8NGR2 347 aa10.64□□□□□ -0.71
HMGN1-208ENST00000443046 ADTRPQ96IZ2 230 aa10.64□□□□□ -0.71
HMGN1-208ENST00000443046 CMSS1Q9BQ75 279 aaKnown RBP10.64□□□□□ -0.71
HMGN1-208ENST00000443046 URM1Q9BTM9 101 aaKnown RBP10.64□□□□□ -0.71
HMGN1-208ENST00000443046 A0A1B0GW64 132 aa10.63□□□□□ -0.71
HMGN1-208ENST00000443046 ZNF320A2RRD8 509 aa10.63□□□□□ -0.71
HMGN1-208ENST00000443046 HMX3A6NHT5 357 aa10.63□□□□□ -0.71
HMGN1-208ENST00000443046 E7EUB6 86 aa10.63□□□□□ -0.71
HMGN1-208ENST00000443046 BET1O15155 118 aa10.63□□□□□ -0.71
HMGN1-208ENST00000443046 CREBL2O60519 120 aaPredicted RBP10.63□□□□□ -0.71
HMGN1-208ENST00000443046 IGHV3-23P01764 117 aa10.63□□□□□ -0.71
HMGN1-208ENST00000443046 IL6RP08887 468 aaPredicted RBP10.63□□□□□ -0.71
HMGN1-208ENST00000443046 WNT4P56705 351 aa10.63□□□□□ -0.71
HMGN1-208ENST00000443046 UNQ9165/PRO28630Q6UXU0 137 aa10.63□□□□□ -0.71
HMGN1-208ENST00000443046 MS4A15Q8N5U1 240 aa10.63□□□□□ -0.71
HMGN1-208ENST00000443046 STPG3Q8N7X2 389 aa10.63□□□□□ -0.71
HMGN1-208ENST00000443046 ZNF555Q8NEP9 628 aa10.63□□□□□ -0.71
HMGN1-208ENST00000443046 OR10J5Q8NHC4 309 aa10.63□□□□□ -0.71
HMGN1-208ENST00000443046 MARC2Q969Z3 335 aa10.63□□□□□ -0.71
HMGN1-208ENST00000443046 GFI1Q99684 422 aa10.63□□□□□ -0.71
HMGN1-208ENST00000443046 SMPD3Q9NY59 655 aaPredicted RBP10.63□□□□□ -0.71
HMGN1-208ENST00000443046 MRPL27Q9P0M9 148 aaKnown RBP10.63□□□□□ -0.71
HMGN1-208ENST00000443046 KCNK7Q9Y2U2 307 aa10.63□□□□□ -0.71
HMGN1-208ENST00000443046 ACTL6BO94805 426 aa10.62□□□□□ -0.71
HMGN1-208ENST00000443046 GSTT2P0CG29 244 aa10.62□□□□□ -0.71
HMGN1-208ENST00000443046 GSTT2BP0CG30 244 aa10.62□□□□□ -0.71
HMGN1-208ENST00000443046 GALP22466 123 aa10.62□□□□□ -0.71
HMGN1-208ENST00000443046 PSMB6P28072 239 aa10.62□□□□□ -0.71
HMGN1-208ENST00000443046 ODF3L2Q3SX64 289 aa10.62□□□□□ -0.71
HMGN1-208ENST00000443046 RBM48Q5RL73 367 aaKnown RBP10.62□□□□□ -0.71
HMGN1-208ENST00000443046 RBPMS2Q6ZRY4 209 aaKnown RBP10.62□□□□□ -0.71
HMGN1-208ENST00000443046 NANOGP1Q8N7R0 232 aa10.62□□□□□ -0.71
HMGN1-208ENST00000443046 SPAG8Q99932 426 aaPredicted RBP10.62□□□□□ -0.71
HMGN1-208ENST00000443046 C5orf66Q9H5L9 145 aa10.62□□□□□ -0.71
HMGN1-208ENST00000443046 SLC2A9Q9NRM0 540 aa10.62□□□□□ -0.71
HMGN1-208ENST00000443046 S4R3C0 116 aa10.62□□□□□ -0.71
HMGN1-208ENST00000443046 A0A1B0GVY2 172 aa10.61□□□□□ -0.71
HMGN1-208ENST00000443046 TSPAN4O14817 238 aa10.61□□□□□ -0.71
HMGN1-208ENST00000443046 CDK1P06493 297 aa10.61□□□□□ -0.71
HMGN1-208ENST00000443046 UCHL1P09936 223 aa10.61□□□□□ -0.71
HMGN1-208ENST00000443046 ZNF735P0CB33 412 aa10.61□□□□□ -0.71
HMGN1-208ENST00000443046 ELLP55199 621 aaPredicted RBP10.61□□□□□ -0.71
HMGN1-208ENST00000443046 TCTAP57738 103 aa10.61□□□□□ -0.71
HMGN1-208ENST00000443046 P2RY14Q15391 338 aa10.61□□□□□ -0.71
HMGN1-208ENST00000443046 ZNF585BQ52M93 769 aa10.61□□□□□ -0.71
HMGN1-208ENST00000443046 LAIR2Q6ISS4 152 aa10.61□□□□□ -0.71
HMGN1-208ENST00000443046 SLC38A6Q8IZM9 456 aa10.61□□□□□ -0.71
HMGN1-208ENST00000443046 FBLIM1Q8WUP2 373 aa10.61□□□□□ -0.71
HMGN1-208ENST00000443046 FYTTD1Q96QD9 318 aaKnown RBP10.61□□□□□ -0.71
HMGN1-208ENST00000443046 MAP6D1Q9H9H5 199 aa10.61□□□□□ -0.71
HMGN1-208ENST00000443046 UBQLN2Q9UHD9 624 aa10.61□□□□□ -0.71
HMGN1-208ENST00000443046 SLC17A2O00624 439 aa10.6□□□□□ -0.71
HMGN1-208ENST00000443046 CLEC3BP05452 202 aa10.6□□□□□ -0.71
HMGN1-208ENST00000443046 FCGR3AP08637 254 aa10.6□□□□□ -0.71
HMGN1-208ENST00000443046 MED14OSP0DP75 135 aa10.6□□□□□ -0.71
HMGN1-208ENST00000443046 CTRB1P17538 263 aa10.6□□□□□ -0.71
HMGN1-208ENST00000443046 HSD17B12Q53GQ0 312 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms