RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 C19orf54Q5BKX5 351 aa11.79□□□□□ -0.52
CSNK1E-210ENST00000442216 LHFPL1Q86WI0 220 aa11.79□□□□□ -0.52
CSNK1E-210ENST00000442216 POC5Q8NA72 575 aa11.79□□□□□ -0.52
CSNK1E-210ENST00000442216 MINDY2Q8NBR6 621 aa11.79□□□□□ -0.52
CSNK1E-210ENST00000442216 TMEM68Q96MH6 324 aa11.79□□□□□ -0.52
CSNK1E-210ENST00000442216 CLCC1Q96S66 551 aa11.79□□□□□ -0.52
CSNK1E-210ENST00000442216 RSRP1Q9BUV0 290 aa11.79□□□□□ -0.52
CSNK1E-210ENST00000442216 TPSG1Q9NRR2 321 aa11.79□□□□□ -0.52
CSNK1E-210ENST00000442216 DPPA5A6NC42 116 aa11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 G3V318 75 aa11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 M0QYG6 137 aa11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 RAB3DO95716 219 aa11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 HPRT1P00492 218 aa11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 IGLV1-40P01703 118 aa11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 EGR2P11161 476 aaPredicted RBP11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 PSMB8P28062 276 aa11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 RPL23AP62750 156 aaKnown RBP11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 FXYD3Q14802 87 aa11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 MEF2DQ14814 521 aa11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 OR2B11Q5JQS5 317 aa11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 AADACL3Q5VUY0 350 aa11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 HIST2H2BDQ6DRA6 164 aa11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 STEAP1BQ6NZ63 245 aa11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 SLC38A6Q8IZM9 456 aa11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 SPAG16Q8N0X2 631 aa11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 ARPC1AQ92747 370 aa11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 ZNF486Q96H40 463 aaPredicted RBP11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 GPHA2Q96T91 129 aa11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 TINAGL1Q9GZM7 467 aaPredicted RBP11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 FAM212BQ9NTI7 297 aaPredicted RBP11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 FBXO7Q9Y3I1 522 aa11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 WSB1Q9Y6I7 421 aa11.78□□□□□ -0.52
CSNK1E-210ENST00000442216 ARPC1BO15143 372 aaKnown RBP11.77□□□□□ -0.53
CSNK1E-210ENST00000442216 PGLYRP1O75594 196 aaPredicted RBP11.77□□□□□ -0.53
CSNK1E-210ENST00000442216 CNIH1O95406 144 aa11.77□□□□□ -0.53
CSNK1E-210ENST00000442216 SAA1P0DJI8 122 aaPredicted RBP11.77□□□□□ -0.53
CSNK1E-210ENST00000442216 CDX1P47902 265 aaPredicted RBP11.77□□□□□ -0.53
CSNK1E-210ENST00000442216 TAS2R31P59538 309 aa11.77□□□□□ -0.53
CSNK1E-210ENST00000442216 SSBP2P81877 361 aaPredicted RBP11.77□□□□□ -0.53
CSNK1E-210ENST00000442216 POU2AF1Q16633 256 aa11.77□□□□□ -0.53
CSNK1E-210ENST00000442216 PRSS8Q16651 343 aa11.77□□□□□ -0.53
CSNK1E-210ENST00000442216 MRGPRG-AS1Q2M3A8 158 aa11.77□□□□□ -0.53
CSNK1E-210ENST00000442216 KHDC1LQ5JSQ8 128 aa11.77□□□□□ -0.53
CSNK1E-210ENST00000442216 MMD2Q8IY49 270 aa11.77□□□□□ -0.53
CSNK1E-210ENST00000442216 PUSL1Q8N0Z8 303 aaKnown RBP11.77□□□□□ -0.53
CSNK1E-210ENST00000442216 OR5M8Q8NGP6 311 aa11.77□□□□□ -0.53
CSNK1E-210ENST00000442216 TERB2Q8NHR7 220 aa11.77□□□□□ -0.53
CSNK1E-210ENST00000442216 ABHD5Q8WTS1 349 aa11.77□□□□□ -0.53
CSNK1E-210ENST00000442216 R3HDM4Q96D70 268 aa11.77□□□□□ -0.53
CSNK1E-210ENST00000442216 RHOVQ96L33 236 aa11.77□□□□□ -0.53
CSNK1E-210ENST00000442216 PLEKHA2Q9HB19 425 aa11.77□□□□□ -0.53
CSNK1E-210ENST00000442216 FOXA2Q9Y261 457 aaPredicted RBP11.77□□□□□ -0.53
CSNK1E-210ENST00000442216 ANKRD20A5PA0PJZ0 165 aa11.76□□□□□ -0.53
CSNK1E-210ENST00000442216 RAMP3O60896 148 aa11.76□□□□□ -0.53
CSNK1E-210ENST00000442216 OR2A4O95047 310 aa11.76□□□□□ -0.53
CSNK1E-210ENST00000442216 RLN1P04808 185 aa11.76□□□□□ -0.53
CSNK1E-210ENST00000442216 AKAIN1P0CW23 69 aa11.76□□□□□ -0.53
CSNK1E-210ENST00000442216 F2RP25116 425 aa11.76□□□□□ -0.53
CSNK1E-210ENST00000442216 MAS1LP35410 378 aa11.76□□□□□ -0.53
CSNK1E-210ENST00000442216 ETV6P41212 452 aa11.76□□□□□ -0.53
CSNK1E-210ENST00000442216 ECI1P42126 302 aa11.76□□□□□ -0.53
CSNK1E-210ENST00000442216 PJVKQ0ZLH3 352 aa11.76□□□□□ -0.53
CSNK1E-210ENST00000442216 ECSCRQ19T08 205 aa11.76□□□□□ -0.53
CSNK1E-210ENST00000442216 UNQ5815/PRO19632Q6UWF5 114 aa11.76□□□□□ -0.53
CSNK1E-210ENST00000442216 CCDC190Q86UF4 302 aa11.76□□□□□ -0.53
CSNK1E-210ENST00000442216 OR51H1Q8NH63 302 aa11.76□□□□□ -0.53
CSNK1E-210ENST00000442216 OR4A5Q8NH83 315 aa11.76□□□□□ -0.53
CSNK1E-210ENST00000442216 FAM110DQ8TAY7 271 aaPredicted RBP11.76□□□□□ -0.53
CSNK1E-210ENST00000442216 TMEM167AQ8TBQ9 72 aa11.76□□□□□ -0.53
CSNK1E-210ENST00000442216 MYOZ3Q8TDC0 251 aa11.76□□□□□ -0.53
CSNK1E-210ENST00000442216 OR2A7Q96R45 310 aa11.76□□□□□ -0.53
CSNK1E-210ENST00000442216 BET1LQ9NYM9 111 aa11.76□□□□□ -0.53
CSNK1E-210ENST00000442216 COMMD9Q9P000 198 aa11.76□□□□□ -0.53
CSNK1E-210ENST00000442216 V9GYH0 126 aa11.76□□□□□ -0.53
CSNK1E-210ENST00000442216 A0A1W2PN81 502 aa11.75□□□□□ -0.53
CSNK1E-210ENST00000442216 A0A1W2PRX2 142 aa11.75□□□□□ -0.53
CSNK1E-210ENST00000442216 DISC1C4P0D8 188 aa11.75□□□□□ -0.53
CSNK1E-210ENST00000442216 KBTBD11O94819 623 aa11.75□□□□□ -0.53
CSNK1E-210ENST00000442216 RPLP1P05386 114 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-210ENST00000442216 FGF2P09038 288 aa11.75□□□□□ -0.53
CSNK1E-210ENST00000442216 ZNF735P0CB33 412 aa11.75□□□□□ -0.53
CSNK1E-210ENST00000442216 PF4V1P10720 104 aa11.75□□□□□ -0.53
CSNK1E-210ENST00000442216 NQO2P16083 231 aa11.75□□□□□ -0.53
CSNK1E-210ENST00000442216 CHRNA7P36544 502 aa11.75□□□□□ -0.53
CSNK1E-210ENST00000442216 RND3P61587 244 aa11.75□□□□□ -0.53
CSNK1E-210ENST00000442216 SPANXN2Q5MJ10 180 aa11.75□□□□□ -0.53
CSNK1E-210ENST00000442216 TMEM65Q6PI78 240 aa11.75□□□□□ -0.53
CSNK1E-210ENST00000442216 IDO2Q6ZQW0 420 aa11.75□□□□□ -0.53
CSNK1E-210ENST00000442216 ZNF695Q8IW36 515 aa11.75□□□□□ -0.53
CSNK1E-210ENST00000442216 CADM3Q8N126 398 aa11.75□□□□□ -0.53
CSNK1E-210ENST00000442216 LFNGQ8NES3 379 aa11.75□□□□□ -0.53
CSNK1E-210ENST00000442216 OR4D10Q8NGI6 311 aa11.75□□□□□ -0.53
CSNK1E-210ENST00000442216 ZFAND1Q8TCF1 268 aa11.75□□□□□ -0.53
CSNK1E-210ENST00000442216 THAP7Q9BT49 309 aaPredicted RBP11.75□□□□□ -0.53
CSNK1E-210ENST00000442216 FAM103A1Q9BTL3 118 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-210ENST00000442216 ZNF430Q9H8G1 570 aaPredicted RBP11.75□□□□□ -0.53
CSNK1E-210ENST00000442216 H3BUA1 57 aa11.74□□□□□ -0.53
CSNK1E-210ENST00000442216 ACTL6BO94805 426 aa11.74□□□□□ -0.53
CSNK1E-210ENST00000442216 BRI3O95415 125 aa11.74□□□□□ -0.53
CSNK1E-210ENST00000442216 CD40LGP29965 261 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms