RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 OR5M8Q8NGP6 311 aa18.39■□□□□ 0.53
VARS-217ENST00000440048 OR5H2Q8NGV7 314 aa18.39■□□□□ 0.53
VARS-217ENST00000440048 SCPEP1Q9HB40 452 aa18.39■□□□□ 0.53
VARS-217ENST00000440048 TNFSF12O43508 249 aa18.38■□□□□ 0.53
VARS-217ENST00000440048 HERV-K104P61576 105 aa18.38■□□□□ 0.53
VARS-217ENST00000440048 PRSS8Q16651 343 aa18.38■□□□□ 0.53
VARS-217ENST00000440048 REC114Q7Z4M0 266 aa18.38■□□□□ 0.53
VARS-217ENST00000440048 ZBTB34Q8NCN2 500 aa18.38■□□□□ 0.53
VARS-217ENST00000440048 OR4S2Q8NH73 311 aa18.38■□□□□ 0.53
VARS-217ENST00000440048 RAB2BQ8WUD1 216 aa18.38■□□□□ 0.53
VARS-217ENST00000440048 I3L521 148 aa18.37■□□□□ 0.53
VARS-217ENST00000440048 DUS4LO95620 317 aaKnown RBP18.37■□□□□ 0.53
VARS-217ENST00000440048 PRB2P02812 416 aaPredicted RBP18.37■□□□□ 0.53
VARS-217ENST00000440048 SAA1P0DJI8 122 aaPredicted RBP18.37■□□□□ 0.53
VARS-217ENST00000440048 RPL5P46777 297 aaKnown RBP18.37■□□□□ 0.53
VARS-217ENST00000440048 RAB25P57735 213 aa18.37■□□□□ 0.53
VARS-217ENST00000440048 FOXB2Q5VYV0 432 aa18.37■□□□□ 0.53
VARS-217ENST00000440048 PYHIN1Q6K0P9 492 aa18.37■□□□□ 0.53
VARS-217ENST00000440048 TMEM17Q86X19 198 aa18.37■□□□□ 0.53
VARS-217ENST00000440048 OR5B12Q96R08 314 aa18.37■□□□□ 0.53
VARS-217ENST00000440048 ZNF2Q9BSG1 426 aaPredicted RBP18.37■□□□□ 0.53
VARS-217ENST00000440048 ADAM30Q9UKF2 790 aa18.37■□□□□ 0.53
VARS-217ENST00000440048 HLA-DMAP28067 261 aa18.36■□□□□ 0.53
VARS-217ENST00000440048 HRH1P35367 487 aa18.36■□□□□ 0.53
VARS-217ENST00000440048 TMBIM6P55061 237 aa18.36■□□□□ 0.53
VARS-217ENST00000440048 RUNX1Q01196 453 aa18.36■□□□□ 0.53
VARS-217ENST00000440048 ZNF818PQ6ZRF7 136 aa18.36■□□□□ 0.53
VARS-217ENST00000440048 MS4A10Q96PG2 267 aa18.36■□□□□ 0.53
VARS-217ENST00000440048 BCL7BQ9BQE9 202 aa18.36■□□□□ 0.53
VARS-217ENST00000440048 EXTL2Q9UBQ6 330 aa18.36■□□□□ 0.53
VARS-217ENST00000440048 SULT1C2O00338 296 aa18.35■□□□□ 0.53
VARS-217ENST00000440048 KIR2DS2P43631 304 aa18.35■□□□□ 0.53
VARS-217ENST00000440048 FHL3Q13643 280 aa18.35■□□□□ 0.53
VARS-217ENST00000440048 TNXAQ16473 311 aa18.35■□□□□ 0.53
VARS-217ENST00000440048 ASPHD1Q5U4P2 390 aa18.35■□□□□ 0.53
VARS-217ENST00000440048 VKORC1L1Q8N0U8 176 aa18.35■□□□□ 0.53
VARS-217ENST00000440048 OR5T1Q8NG75 326 aa18.35■□□□□ 0.53
VARS-217ENST00000440048 OR11H1Q8NG94 326 aa18.35■□□□□ 0.53
VARS-217ENST00000440048 MOB3AQ96BX8 217 aa18.35■□□□□ 0.53
VARS-217ENST00000440048 ZNF430Q9H8G1 570 aaPredicted RBP18.35■□□□□ 0.53
VARS-217ENST00000440048 CD40LGP29965 261 aa18.34■□□□□ 0.53
VARS-217ENST00000440048 GNRHRP30968 328 aa18.34■□□□□ 0.53
VARS-217ENST00000440048 RCVRNP35243 200 aa18.34■□□□□ 0.53
VARS-217ENST00000440048 MCRIP2Q9BUT9 160 aaKnown RBP18.34■□□□□ 0.53
VARS-217ENST00000440048 MIXL1Q9H2W2 232 aa18.34■□□□□ 0.53
VARS-217ENST00000440048 MSGN1A6NI15 193 aa18.33■□□□□ 0.52
VARS-217ENST00000440048 TPPP2P59282 170 aa18.33■□□□□ 0.52
VARS-217ENST00000440048 CATR1Q13166 79 aa18.33■□□□□ 0.52
VARS-217ENST00000440048 MMD2Q8IY49 270 aa18.33■□□□□ 0.52
VARS-217ENST00000440048 SPAG16Q8N0X2 631 aa18.33■□□□□ 0.52
VARS-217ENST00000440048 POC5Q8NA72 575 aa18.33■□□□□ 0.52
VARS-217ENST00000440048 OR1N2Q8NGR9 330 aa18.33■□□□□ 0.52
VARS-217ENST00000440048 OR6F1Q8NGZ6 308 aa18.33■□□□□ 0.52
VARS-217ENST00000440048 DYNC2LI1Q8TCX1 351 aa18.33■□□□□ 0.52
VARS-217ENST00000440048 TMEM68Q96MH6 324 aa18.33■□□□□ 0.52
VARS-217ENST00000440048 SLA2Q9H6Q3 261 aa18.33■□□□□ 0.52
VARS-217ENST00000440048 CTDSP2O14595 271 aa18.32■□□□□ 0.52
VARS-217ENST00000440048 CREBL2O60519 120 aaPredicted RBP18.32■□□□□ 0.52
VARS-217ENST00000440048 RAMP3O60896 148 aa18.32■□□□□ 0.52
VARS-217ENST00000440048 OR2A4O95047 310 aa18.32■□□□□ 0.52
VARS-217ENST00000440048 TRGV3P03979 118 aa18.32■□□□□ 0.52
VARS-217ENST00000440048 RNASE12Q5GAN4 147 aaKnown RBP18.32■□□□□ 0.52
VARS-217ENST00000440048 PUSL1Q8N0Z8 303 aaKnown RBP18.32■□□□□ 0.52
VARS-217ENST00000440048 SRSF12Q8WXF0 261 aaKnown RBP18.32■□□□□ 0.52
VARS-217ENST00000440048 BORCS5Q969J3 196 aa18.32■□□□□ 0.52
VARS-217ENST00000440048 OR2A7Q96R45 310 aa18.32■□□□□ 0.52
VARS-217ENST00000440048 PHB2Q99623 299 aa18.32■□□□□ 0.52
VARS-217ENST00000440048 GPR61Q9BZJ8 451 aa18.32■□□□□ 0.52
VARS-217ENST00000440048 FXYD6Q9H0Q3 95 aa18.32■□□□□ 0.52
VARS-217ENST00000440048 ALX4Q9H161 411 aaPredicted RBP18.32■□□□□ 0.52
VARS-217ENST00000440048 ZNF355PQ9NSJ1 428 aa18.32■□□□□ 0.52
VARS-217ENST00000440048 H3BUA1 57 aa18.31■□□□□ 0.52
VARS-217ENST00000440048 RGS5O15539 181 aa18.31■□□□□ 0.52
VARS-217ENST00000440048 RBFOX2O43251 390 aaKnown RBP eCLIP18.31■□□□□ 0.52
VARS-217ENST00000440048 ACTL6BO94805 426 aa18.31■□□□□ 0.52
VARS-217ENST00000440048 TPPPO94811 219 aa18.31■□□□□ 0.52
VARS-217ENST00000440048 HRASP01112 189 aa18.31■□□□□ 0.52
VARS-217ENST00000440048 LGALS1P09382 135 aaKnown RBP18.31■□□□□ 0.52
VARS-217ENST00000440048 APELAP0DMC3 54 aa18.31■□□□□ 0.52
VARS-217ENST00000440048 ZNF616Q08AN1 781 aa18.31■□□□□ 0.52
VARS-217ENST00000440048 LAX1Q8IWV1 398 aa18.31■□□□□ 0.52
VARS-217ENST00000440048 OR51H1Q8NH63 302 aa18.31■□□□□ 0.52
VARS-217ENST00000440048 OR52I2Q8NH67 350 aa18.31■□□□□ 0.52
VARS-217ENST00000440048 VSTM2AQ8TAG5 236 aa18.31■□□□□ 0.52
VARS-217ENST00000440048 RHOVQ96L33 236 aa18.31■□□□□ 0.52
VARS-217ENST00000440048 ABHD1Q96SE0 405 aa18.31■□□□□ 0.52
VARS-217ENST00000440048 AURKAIP1Q9NWT8 199 aaPredicted RBP18.31■□□□□ 0.52
VARS-217ENST00000440048 CCDC59Q9P031 241 aaKnown RBP18.31■□□□□ 0.52
VARS-217ENST00000440048 NOL3O60936 208 aaKnown RBP18.3■□□□□ 0.52
VARS-217ENST00000440048 KBTBD11O94819 623 aa18.3■□□□□ 0.52
VARS-217ENST00000440048 IGHV3-11P01762 117 aa18.3■□□□□ 0.52
VARS-217ENST00000440048 HOXD3P31249 432 aaPredicted RBP18.3■□□□□ 0.52
VARS-217ENST00000440048 TSPAN5P62079 268 aa18.3■□□□□ 0.52
VARS-217ENST00000440048 C10orf55Q5SWW7 151 aa18.3■□□□□ 0.52
VARS-217ENST00000440048 AADACL3Q5VUY0 350 aa18.3■□□□□ 0.52
VARS-217ENST00000440048 TMEM167AQ8TBQ9 72 aa18.3■□□□□ 0.52
VARS-217ENST00000440048 ISOC1Q96CN7 298 aa18.3■□□□□ 0.52
VARS-217ENST00000440048 KLK11Q9UBX7 282 aa18.3■□□□□ 0.52
VARS-217ENST00000440048 H3BMQ9 156 aa18.29■□□□□ 0.52
VARS-217ENST00000440048 OR8U8P0C7N1 319 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms