RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 ZNF66Q6ZN08 573 aa11.26□□□□□ -0.61
HERPUD1-204ENST00000439977 PRDM13Q9H4Q3 707 aa11.26□□□□□ -0.61
HERPUD1-204ENST00000439977 HEYLQ9NQ87 328 aaPredicted RBP11.26□□□□□ -0.61
HERPUD1-204ENST00000439977 IGKV1D-17A0A075B6S4 117 aa11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 IGHV1-18A0A0C4DH31 117 aa11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 GYPAP02724 150 aa11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 CD1BP29016 333 aa11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 ZNF83P51522 516 aa11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 UNQ6494/PRO21346Q6UXR6 183 aa11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 Q8TCH9 128 aa11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 MEGF10Q96KG7 1140 aa11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 OR5B12Q96R08 314 aa11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 GFOD1Q9NXC2 390 aa11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 TIMM9Q9Y5J7 89 aa11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 IGHV2OR16-5A0A0B4J2B6 119 aa11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 SPAARA0A1B0GVQ0 90 aa11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 PPP5D1E7EU14 171 aa11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 C15orf65H3BRN8 121 aa11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 C1orf229Q6ZS94 237 aaPredicted RBP11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 CENPVQ7Z7K6 275 aaPredicted RBP11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 SSMEM1Q8WWF3 244 aa11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 OR6C3Q9NZP0 311 aa11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 SLC31A2O15432 143 aa11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 NDUFB4O95168 129 aa11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 DUTP33316 252 aaKnown RBP11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 ATP6V1FQ16864 119 aa11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 TAAR6Q96RI8 345 aa11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 PARD6GQ9BYG4 376 aaPredicted RBP11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 WASF3Q9UPY6 502 aa11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 FUT9Q9Y231 359 aa11.25□□□□□ -0.61
HERPUD1-204ENST00000439977 SPTBN2O15020 2390 aa11.24□□□□□ -0.61
HERPUD1-204ENST00000439977 SPRY3O43610 288 aa11.24□□□□□ -0.61
HERPUD1-204ENST00000439977 MYOD1P15172 320 aa11.24□□□□□ -0.61
HERPUD1-204ENST00000439977 DUX4L9Q6RFH8 374 aaPredicted RBP11.24□□□□□ -0.61
HERPUD1-204ENST00000439977 OR4A16Q8NH70 328 aa11.24□□□□□ -0.61
HERPUD1-204ENST00000439977 CIB3Q96Q77 187 aaPredicted RBP11.24□□□□□ -0.61
HERPUD1-204ENST00000439977 HSD17B10Q99714 261 aaKnown RBP11.24□□□□□ -0.61
HERPUD1-204ENST00000439977 CTDSP1Q9GZU7 261 aa11.24□□□□□ -0.61
HERPUD1-204ENST00000439977 A0A0U1RQK1 487 aa11.24□□□□□ -0.61
HERPUD1-204ENST00000439977 IFNL4K9M1U5 179 aa11.24□□□□□ -0.61
HERPUD1-204ENST00000439977 ACSF3Q4G176 576 aaPredicted RBP11.24□□□□□ -0.61
HERPUD1-204ENST00000439977 MIC13Q5XKP0 118 aa11.24□□□□□ -0.61
HERPUD1-204ENST00000439977 MOGAT3Q86VF5 341 aa11.24□□□□□ -0.61
HERPUD1-204ENST00000439977 Q8N7P7 452 aa11.24□□□□□ -0.61
HERPUD1-204ENST00000439977 ZNF114Q8NC26 417 aa11.24□□□□□ -0.61
HERPUD1-204ENST00000439977 DEFB108BQ8NET1 73 aa11.24□□□□□ -0.61
HERPUD1-204ENST00000439977 HINT2Q9BX68 163 aa11.24□□□□□ -0.61
HERPUD1-204ENST00000439977 A0A1W2PPV4 95 aa11.23□□□□□ -0.61
HERPUD1-204ENST00000439977 XKRY2A2RUG3 117 aa11.23□□□□□ -0.61
HERPUD1-204ENST00000439977 TMEM250H0YL14 139 aa11.23□□□□□ -0.61
HERPUD1-204ENST00000439977 MBP02144 154 aa11.23□□□□□ -0.61
HERPUD1-204ENST00000439977 HIST1H1BP16401 226 aaKnown RBP11.23□□□□□ -0.61
HERPUD1-204ENST00000439977 MORN2Q502X0 79 aa11.23□□□□□ -0.61
HERPUD1-204ENST00000439977 RPRMLQ8N4K4 120 aa11.23□□□□□ -0.61
HERPUD1-204ENST00000439977 NEIL1Q96FI4 390 aaPredicted RBP11.23□□□□□ -0.61
HERPUD1-204ENST00000439977 LURAP1Q96LR2 239 aa11.23□□□□□ -0.61
HERPUD1-204ENST00000439977 SRD5A3Q9H8P0 318 aa11.23□□□□□ -0.61
HERPUD1-204ENST00000439977 ELOA3CA0A087WX78 387 aaPredicted RBP11.23□□□□□ -0.61
HERPUD1-204ENST00000439977 ZNF729A6NN14 1252 aaPredicted RBP11.23□□□□□ -0.61
HERPUD1-204ENST00000439977 C1QTNF9P0C862 333 aa11.23□□□□□ -0.61
HERPUD1-204ENST00000439977 CD82P27701 267 aa11.23□□□□□ -0.61
HERPUD1-204ENST00000439977 DEFB124Q8NES8 71 aa11.23□□□□□ -0.61
HERPUD1-204ENST00000439977 M0R1B8 84 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 IGHG3P01860 377 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 GNB1P62873 340 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 GUSBP1Q15486 140 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 DEFB109BQ30KR1 87 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 ACOT6Q3I5F7 207 aaPredicted RBP11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 FAM78BQ5VT40 261 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 PRR7Q8TB68 274 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 OR2V2Q96R30 315 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 MRPL37Q9BZE1 423 aaKnown RBP11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 PITPNC1Q9UKF7 332 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 C17orf112F2Z3M2 114 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 AQP7O14520 342 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 GNB2P62879 340 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 DEFA6Q01524 100 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 GCSAMQ8N6F7 178 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 MS4A5Q9H3V2 200 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 MANBALQ9NQG1 85 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 PLCE1Q9P212 2302 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 A0A1B0GUS0 222 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 AMBPP02760 352 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 KITLGP21583 273 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 PDLIM3Q53GG5 364 aaPredicted RBP11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 TREML4Q6UXN2 200 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 STARD4Q96DR4 205 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 ZNRD1Q9P1U0 126 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 DKK4Q9UBT3 224 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 WDR83OSQ9Y284 106 aa11.22□□□□□ -0.61
HERPUD1-204ENST00000439977 RIF1Q5UIP0 2472 aaKnown RBP11.21□□□□□ -0.61
HERPUD1-204ENST00000439977 TNFSF13O75888 250 aa11.21□□□□□ -0.61
HERPUD1-204ENST00000439977 ARL14EPLP0DKL9 152 aa11.21□□□□□ -0.61
HERPUD1-204ENST00000439977 GPX4P36969 197 aaPredicted RBP11.21□□□□□ -0.61
HERPUD1-204ENST00000439977 OR2T10Q8NGZ9 312 aa11.21□□□□□ -0.61
HERPUD1-204ENST00000439977 FAM122AQ96E09 287 aa11.21□□□□□ -0.61
HERPUD1-204ENST00000439977 ZNF71Q9NQZ8 489 aaPredicted RBP11.21□□□□□ -0.61
HERPUD1-204ENST00000439977 ZMAT5Q9UDW3 170 aaKnown RBP11.21□□□□□ -0.61
HERPUD1-204ENST00000439977 ZNF705GA8MUZ8 300 aaPredicted RBP11.21□□□□□ -0.62
HERPUD1-204ENST00000439977 HRASP01112 189 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms