RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 ETV3LQ6ZN32 361 aa8.16□□□□□ -1.1
MCF2L-216ENST00000439475 OVCH2Q7RTZ1 564 aa8.16□□□□□ -1.1
MCF2L-216ENST00000439475 SNX29P2Q8IUI4 249 aa8.16□□□□□ -1.1
MCF2L-216ENST00000439475 CLVS1Q8IUQ0 354 aaPredicted RBP8.16□□□□□ -1.1
MCF2L-216ENST00000439475 OR1N2Q8NGR9 330 aa8.16□□□□□ -1.1
MCF2L-216ENST00000439475 MYOZ3Q8TDC0 251 aa8.16□□□□□ -1.1
MCF2L-216ENST00000439475 GPX8Q8TED1 209 aa8.16□□□□□ -1.1
MCF2L-216ENST00000439475 RAB2BQ8WUD1 216 aa8.16□□□□□ -1.1
MCF2L-216ENST00000439475 SNAPC3Q92966 411 aa8.16□□□□□ -1.1
MCF2L-216ENST00000439475 C5orf30Q96GV9 206 aa8.16□□□□□ -1.1
MCF2L-216ENST00000439475 RAX2Q96IS3 184 aa8.16□□□□□ -1.1
MCF2L-216ENST00000439475 BCL7BQ9BQE9 202 aa8.16□□□□□ -1.1
MCF2L-216ENST00000439475 ZNF2Q9BSG1 426 aaPredicted RBP8.16□□□□□ -1.1
MCF2L-216ENST00000439475 NAA50Q9GZZ1 169 aaKnown RBP8.16□□□□□ -1.1
MCF2L-216ENST00000439475 TAS2R8Q9NYW2 309 aa8.16□□□□□ -1.1
MCF2L-216ENST00000439475 FBXO7Q9Y3I1 522 aa8.16□□□□□ -1.1
MCF2L-216ENST00000439475 ARPC1BO15143 372 aaKnown RBP8.15□□□□□ -1.1
MCF2L-216ENST00000439475 OR2A4O95047 310 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 IGLV2-14P01704 120 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 PMP2P02689 132 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 TRGV3P03979 118 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 ELK1P19419 428 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 RPL5P46777 297 aaKnown RBP8.15□□□□□ -1.1
MCF2L-216ENST00000439475 ZNF616Q08AN1 781 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 KIAA0141Q14154 515 aaPredicted RBP8.15□□□□□ -1.1
MCF2L-216ENST00000439475 PRSS8Q16651 343 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 C19orf54Q5BKX5 351 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 OR2B11Q5JQS5 317 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 C9orf66Q5T8R8 295 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 SLC25A42Q86VD7 318 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 TMEM17Q86X19 198 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 CMTM1Q8IZ96 169 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 SPAG16Q8N0X2 631 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 OR5T1Q8NG75 326 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 CD300LFQ8TDQ1 290 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 MS4A10Q96PG2 267 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 DUX3Q96PT4 197 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 OR5B12Q96R08 314 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 OR2A7Q96R45 310 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 SPIN2AQ99865 258 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 SPIN2BQ9BPZ2 258 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 TPSG1Q9NRR2 321 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 EXTL2Q9UBQ6 330 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 ANAPC10Q9UM13 185 aa8.15□□□□□ -1.1
MCF2L-216ENST00000439475 C13orf42A0A1B0GVH6 325 aa8.14□□□□□ -1.11
MCF2L-216ENST00000439475 MSGN1A6NI15 193 aa8.14□□□□□ -1.11
MCF2L-216ENST00000439475 I3L521 148 aa8.14□□□□□ -1.11
MCF2L-216ENST00000439475 RGS5O15539 181 aa8.14□□□□□ -1.11
MCF2L-216ENST00000439475 RBFOX2O43251 390 aaKnown RBP eCLIP8.14□□□□□ -1.11
MCF2L-216ENST00000439475 TNFSF12O43508 249 aa8.14□□□□□ -1.11
MCF2L-216ENST00000439475 SOX15O60248 233 aa8.14□□□□□ -1.11
MCF2L-216ENST00000439475 HPRT1P00492 218 aa8.14□□□□□ -1.11
MCF2L-216ENST00000439475 HSPB1P04792 205 aaKnown RBP8.14□□□□□ -1.11
MCF2L-216ENST00000439475 IFNA6P05013 189 aa8.14□□□□□ -1.11
MCF2L-216ENST00000439475 SAA1P0DJI8 122 aaPredicted RBP8.14□□□□□ -1.11
MCF2L-216ENST00000439475 HLA-DMAP28067 261 aa8.14□□□□□ -1.11
MCF2L-216ENST00000439475 RCVRNP35243 200 aa8.14□□□□□ -1.11
MCF2L-216ENST00000439475 MAS1LP35410 378 aa8.14□□□□□ -1.11
MCF2L-216ENST00000439475 RFX2P48378 723 aa8.14□□□□□ -1.11
MCF2L-216ENST00000439475 TMBIM6P55061 237 aa8.14□□□□□ -1.11
MCF2L-216ENST00000439475 PJVKQ0ZLH3 352 aa8.14□□□□□ -1.11
MCF2L-216ENST00000439475 DEFB136Q30KP8 78 aa8.14□□□□□ -1.11
MCF2L-216ENST00000439475 MRAPQ8TCY5 172 aa8.14□□□□□ -1.11
MCF2L-216ENST00000439475 SRSF12Q8WXF0 261 aaKnown RBP8.14□□□□□ -1.11
MCF2L-216ENST00000439475 MOB3AQ96BX8 217 aa8.14□□□□□ -1.11
MCF2L-216ENST00000439475 RHOVQ96L33 236 aa8.14□□□□□ -1.11
MCF2L-216ENST00000439475 GNB4Q9HAV0 340 aa8.14□□□□□ -1.11
MCF2L-216ENST00000439475 RABL2AQ9UBK7 228 aaPredicted RBP8.14□□□□□ -1.11
MCF2L-216ENST00000439475 RABL2BQ9UNT1 228 aa8.14□□□□□ -1.11
MCF2L-216ENST00000439475 DPPA5A6NC42 116 aa8.13□□□□□ -1.11
MCF2L-216ENST00000439475 LINC01619G3V211 115 aa8.13□□□□□ -1.11
MCF2L-216ENST00000439475 GPR31O00270 319 aa8.13□□□□□ -1.11
MCF2L-216ENST00000439475 RAMP3O60896 148 aa8.13□□□□□ -1.11
MCF2L-216ENST00000439475 BRI3O95415 125 aa8.13□□□□□ -1.11
MCF2L-216ENST00000439475 LGALS1P09382 135 aaKnown RBP8.13□□□□□ -1.11
MCF2L-216ENST00000439475 OR9G9P0C7N8 305 aa8.13□□□□□ -1.11
MCF2L-216ENST00000439475 GNRHRP30968 328 aa8.13□□□□□ -1.11
MCF2L-216ENST00000439475 HRH1P35367 487 aa8.13□□□□□ -1.11
MCF2L-216ENST00000439475 INSL3P51460 131 aa8.13□□□□□ -1.11
MCF2L-216ENST00000439475 TAS2R31P59538 309 aa8.13□□□□□ -1.11
MCF2L-216ENST00000439475 EIF4EBP1Q13541 118 aaPredicted RBP8.13□□□□□ -1.11
MCF2L-216ENST00000439475 AADACL3Q5VUY0 350 aa8.13□□□□□ -1.11
MCF2L-216ENST00000439475 IDO2Q6ZQW0 420 aa8.13□□□□□ -1.11
MCF2L-216ENST00000439475 ZNF818PQ6ZRF7 136 aa8.13□□□□□ -1.11
MCF2L-216ENST00000439475 LYSMD2Q8IV50 215 aa8.13□□□□□ -1.11
MCF2L-216ENST00000439475 OR4A5Q8NH83 315 aa8.13□□□□□ -1.11
MCF2L-216ENST00000439475 TMEM167AQ8TBQ9 72 aa8.13□□□□□ -1.11
MCF2L-216ENST00000439475 FCAMRQ8WWV6 532 aa8.13□□□□□ -1.11
MCF2L-216ENST00000439475 USMG5Q96IX5 58 aa8.13□□□□□ -1.11
MCF2L-216ENST00000439475 ZNF430Q9H8G1 570 aaPredicted RBP8.13□□□□□ -1.11
MCF2L-216ENST00000439475 RANGRFQ9HD47 186 aaPredicted RBP8.13□□□□□ -1.11
MCF2L-216ENST00000439475 AURKAIP1Q9NWT8 199 aaPredicted RBP8.13□□□□□ -1.11
MCF2L-216ENST00000439475 COA4Q9NYJ1 87 aa8.13□□□□□ -1.11
MCF2L-216ENST00000439475 SCOCQ9UIL1 159 aa8.13□□□□□ -1.11
MCF2L-216ENST00000439475 SEC14L6B5MCN3 397 aa8.12□□□□□ -1.11
MCF2L-216ENST00000439475 KBTBD11O94819 623 aa8.12□□□□□ -1.11
MCF2L-216ENST00000439475 NQO2P16083 231 aa8.12□□□□□ -1.11
MCF2L-216ENST00000439475 RPL27AP46776 148 aaKnown RBP8.12□□□□□ -1.11
MCF2L-216ENST00000439475 ERVK-16P61578 105 aa8.12□□□□□ -1.11
MCF2L-216ENST00000439475 MRPS10P82664 201 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms