RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 NDUFB4O95168 129 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 ESDP10768 282 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 LHX2P50458 406 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 TFF3Q07654 80 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 Q6ZS92 163 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 ZNF114Q8NC26 417 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 OR56B2PQ8NGI1 322 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 IL1F10Q8WWZ1 152 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 SPSB4Q96A44 273 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 SFRP2Q96HF1 295 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 ALKBH3Q96Q83 286 aaPredicted RBP7.19□□□□□ -1.26
HPS4-206ENST00000439453 DERL1Q9BUN8 251 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 TRBV6-6A0A0A6YYG2 114 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 PGPEP1LA6NFU8 196 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 PDE6DO43924 150 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 DEFA4P12838 97 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 MDS2Q8NDY4 140 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 OR5AU1Q8NGC0 362 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 MDFIC2A0A1B0GVS7 189 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 RBFOX2O43251 390 aaKnown RBP eCLIP7.18□□□□□ -1.26
HPS4-206ENST00000439453 ZIC3O60481 467 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 TRAPPC6AO75865 159 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 KRASP01116 189 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 CRISP2P16562 243 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 BMP5P22003 454 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 ATP5G3P48201 142 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 COMPP49747 757 aaPredicted RBP7.18□□□□□ -1.26
HPS4-206ENST00000439453 PRR30Q53SZ7 412 aaPredicted RBP7.18□□□□□ -1.26
HPS4-206ENST00000439453 MKXQ8IYA7 352 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 RDH5Q92781 318 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 SLC35E1Q96K37 410 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 FOXB1Q99853 325 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 LIN7CQ9NUP9 197 aaKnown RBP7.18□□□□□ -1.26
HPS4-206ENST00000439453 CRIM1Q9NZV1 1036 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 ZNF462Q96JM2 2506 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 F6UZH7 168 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 CBR3O75828 277 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 CBLN1P23435 193 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 UBE2G2P60604 165 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 BAGE3Q86Y29 109 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 BAGE2Q86Y30 109 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 OR5P3Q8WZ94 311 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 C1QTNF5Q9BXJ0 243 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 KCNS2Q9ULS6 477 aa7.18□□□□□ -1.26
HPS4-206ENST00000439453 NEURL1O76050 574 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 KITLGP21583 273 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 CDC34P49427 236 aaPredicted RBP7.17□□□□□ -1.26
HPS4-206ENST00000439453 PCBD1P61457 104 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 FGFRL1Q8N441 504 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 SGCZQ96LD1 299 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 SF3B5Q9BWJ5 86 aaKnown RBP7.17□□□□□ -1.26
HPS4-206ENST00000439453 NPCDR1Q9BY65 106 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 SH2D2AQ9NP31 389 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 WIPI2Q9Y4P8 454 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 FLNCQ14315 2725 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 DIDO1Q9BTC0 2240 aaKnown RBP7.17□□□□□ -1.26
HPS4-206ENST00000439453 DEGS1O15121 323 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 PTTG1IPP53801 180 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 MMDQ15546 238 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 CEACAM16Q2WEN9 425 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 LINC00696Q6ZRV3 163 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 CIB3Q96Q77 187 aaPredicted RBP7.17□□□□□ -1.26
HPS4-206ENST00000439453 MRPL18Q9H0U6 180 aaKnown RBP7.17□□□□□ -1.26
HPS4-206ENST00000439453 KCNIP2Q9NS61 270 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 PMS2P5A8MQ11 134 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 G3V3Y1 287 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.17□□□□□ -1.26
HPS4-206ENST00000439453 SYNGR1O43759 233 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 WISP2O76076 250 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 DSCR4P56555 118 aaPredicted RBP7.17□□□□□ -1.26
HPS4-206ENST00000439453 AAED1Q7RTV5 226 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 OR10P1Q8NGE3 313 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 OR4B1Q8NGF8 309 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 OR1L1Q8NH94 360 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 HES7Q9BYE0 225 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 PRDM14Q9GZV8 571 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 CLN8Q9UBY8 286 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 HSPB7Q9UBY9 170 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 PPIAL4AQ9Y536 164 aa7.17□□□□□ -1.26
HPS4-206ENST00000439453 TRAV24A0A0B4J272 114 aa7.16□□□□□ -1.26
HPS4-206ENST00000439453 C20orf202A1L168 122 aa7.16□□□□□ -1.26
HPS4-206ENST00000439453 AQP7O14520 342 aa7.16□□□□□ -1.26
HPS4-206ENST00000439453 RPS16P62249 146 aaKnown RBP7.16□□□□□ -1.26
HPS4-206ENST00000439453 RPP30P78346 268 aaKnown RBP7.16□□□□□ -1.26
HPS4-206ENST00000439453 CEACAM21Q3KPI0 293 aa7.16□□□□□ -1.26
HPS4-206ENST00000439453 OR10G8Q8NGN5 311 aa7.16□□□□□ -1.26
HPS4-206ENST00000439453 ZNF488Q96MN9 340 aa7.16□□□□□ -1.26
HPS4-206ENST00000439453 TRAV39A0A0B4J263 110 aa7.16□□□□□ -1.26
HPS4-206ENST00000439453 NPIPB11E5RHQ5 1161 aa7.16□□□□□ -1.26
HPS4-206ENST00000439453 F2Z2F3 143 aa7.16□□□□□ -1.26
HPS4-206ENST00000439453 WDR1O75083 606 aa7.16□□□□□ -1.26
HPS4-206ENST00000439453 RAC1P63000 192 aa7.16□□□□□ -1.26
HPS4-206ENST00000439453 ZNF90Q03938 601 aa7.16□□□□□ -1.26
HPS4-206ENST00000439453 KLRB1Q12918 225 aa7.16□□□□□ -1.26
HPS4-206ENST00000439453 STPG4Q8N801 248 aa7.16□□□□□ -1.26
HPS4-206ENST00000439453 CPEB3Q8NE35 698 aaKnown RBP7.16□□□□□ -1.26
HPS4-206ENST00000439453 OR5A2Q8NGI9 324 aa7.16□□□□□ -1.26
HPS4-206ENST00000439453 FBXL7Q9UJT9 491 aa7.16□□□□□ -1.26
HPS4-206ENST00000439453 C17orf112F2Z3M2 114 aa7.16□□□□□ -1.26
HPS4-206ENST00000439453 ZNHIT1O43257 154 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms