RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 ATRXP46100 2492 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 SCO2A0A1W2PP80 73 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 B4E171 279 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 CD82P27701 267 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 TSPAN7P41732 249 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 SRPXP78539 464 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 PNRC1Q12796 327 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 Q56UQ5 140 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 TMEM211Q6ICI0 200 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 DOLPP1Q86YN1 238 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 ZNF439Q8NDP4 499 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 NEIL1Q96FI4 390 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 FER1L6-AS2Q96M78 137 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 LPAR2Q9HBW0 351 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 HEYLQ9NQ87 328 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 DLL3Q9NYJ7 618 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 CISD1Q9NZ45 108 aaKnown RBP8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 A0A1W2PNU3 283 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 KBTBD11O94819 623 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 CLDN14O95500 239 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 OR10J4P0C629 311 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 ARR3P36575 388 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 CAMPP49913 170 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 HNRNPA3P51991 378 aaKnown RBP8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 FGF12P61328 243 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 OR10P1Q8NGE3 313 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 OR5R1Q8NH85 324 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 RNF138Q8WVD3 245 aa8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 REPIN1Q9BWE0 567 aaKnown RBP8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 KLF13Q9Y2Y9 288 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE1-202ENST00000439374 C20orf202A1L168 122 aa8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 DIRC3C9JPN6 131 aa8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 PFN1P07737 140 aaKnown RBP8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 CDC34P49427 236 aaPredicted RBP8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 ID3Q02535 119 aa8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 MIC13Q5XKP0 118 aa8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 OR52L2PQ8NGH6 319 aa8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 OR1L1Q8NH94 360 aa8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 NANOS1Q8WY41 292 aaKnown RBP8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 LEAP2Q969E1 77 aa8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 C10orf35Q96D05 121 aa8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 STARD4Q96DR4 205 aa8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 PMCHL2Q9BQD1 86 aa8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 NUDT16L1Q9BRJ7 211 aaKnown RBP8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 OR6C3Q9NZP0 311 aa8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 IGKV1-5P01602 117 aa8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 RAC2P15153 192 aa8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 OR10J1P30954 320 aa8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 SUMO1P63165 101 aaKnown RBP8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 RIPPLY2Q5TAB7 128 aa8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 ABLIM2Q6H8Q1 611 aa8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 Q6ZWC4 215 aa8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 FGFRL1Q8N441 504 aa8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 SSC4DQ8WTU2 575 aa8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 GNG12Q9UBI6 72 aa8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 TLN1Q9Y490 2541 aaKnown RBP8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 ZGRF1Q86YA3 2104 aa8.36□□□□□ -1.07
CDC42SE1-202ENST00000439374 DUXBA0A1W2PPF3 345 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 M0QZ24 198 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 GCGP01275 180 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 GATA2P23769 480 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 CD24P25063 80 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 RELBQ01201 579 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 OR8B8Q15620 311 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 PMCHL1Q16048 86 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 SPATA45Q537H7 98 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 NMSQ5H8A3 153 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 NAA38Q9BRA0 125 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 C1QTNF5Q9BXJ0 243 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 ACTR3CQ9C0K3 210 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 WDR61Q9GZS3 305 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 IGHV3OR15-7A0A075B7D8 119 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 M0R296 226 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 RBFOX2O43251 390 aaKnown RBP eCLIP8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 S1PR2O95136 353 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 OR2H2O95918 312 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 OR5G3P0C626 314 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 HLA-DRB5Q30154 266 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 STPG3Q8N7X2 389 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 OR5AU1Q8NGC0 362 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 SNIP1Q8TAD8 396 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 RNASE8Q8TDE3 154 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 RTL8AQ9BWD3 113 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 TRBV24-1A0A075B6N3 115 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 FOXI3A8MTJ6 420 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 B4DEV8 164 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 RRP8O43159 456 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 ZNF253O75346 499 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 MSMO1Q15800 293 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 FBXW9Q5XUX1 488 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 CYP2G1PQ6ZSU1 146 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 GBGT1Q8N5D6 347 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 SCCPDHQ8NBX0 429 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 MRPL18Q9H0U6 180 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 OR2W1Q9Y3N9 320 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 RNF114Q9Y508 228 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 YLPM1P49750 1951 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 NOTCH3Q9UM47 2321 aa8.35□□□□□ -1.07
CDC42SE1-202ENST00000439374 TRAV24A0A0B4J272 114 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 IGKV1-39P01597 117 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms