RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 HTD2P86397 168 aa11.2□□□□□ -0.62
ACTN1-204ENST00000438964 PCOLCEQ15113 449 aa11.2□□□□□ -0.62
ACTN1-204ENST00000438964 Q8N976 141 aa11.2□□□□□ -0.62
ACTN1-204ENST00000438964 C1QTNF5Q9BXJ0 243 aa11.2□□□□□ -0.62
ACTN1-204ENST00000438964 CHRNA10Q9GZZ6 450 aa11.2□□□□□ -0.62
ACTN1-204ENST00000438964 LAMTOR2Q9Y2Q5 125 aa11.2□□□□□ -0.62
ACTN1-204ENST00000438964 DMXL2Q8TDJ6 3036 aa11.2□□□□□ -0.62
ACTN1-204ENST00000438964 GRPP07492 148 aa11.2□□□□□ -0.62
ACTN1-204ENST00000438964 BRWD1-AS2P59051 145 aa11.2□□□□□ -0.62
ACTN1-204ENST00000438964 RAC3P60763 192 aa11.2□□□□□ -0.62
ACTN1-204ENST00000438964 UBE2NP61088 152 aaKnown RBP11.2□□□□□ -0.62
ACTN1-204ENST00000438964 RELBQ01201 579 aa11.2□□□□□ -0.62
ACTN1-204ENST00000438964 GGNQ86UU5 652 aa11.2□□□□□ -0.62
ACTN1-204ENST00000438964 CDIPTO14735 213 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 ZNF253O75346 499 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 SRIP30626 198 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 FOXL1Q12952 345 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 OR2M7Q8NG81 312 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 DCTN5Q9BTE1 182 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 SEPSECSQ9HD40 501 aaKnown RBP11.19□□□□□ -0.62
ACTN1-204ENST00000438964 SERTAD4Q9NUC0 356 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 SYNGR4O95473 234 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 TDGF1P13385 188 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 SSR4P51571 173 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 GFRA1P56159 465 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 AESQ08117 197 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 RABEPKQ7Z6M1 372 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 MMD2Q8IY49 270 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 ABHD12Q8N2K0 398 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 C22orf15Q8WYQ4 148 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 ZNF586Q9NXT0 402 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 KALRNO60229 2985 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 WNT9BO14905 357 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 MRPL33O75394 65 aaKnown RBP11.19□□□□□ -0.62
ACTN1-204ENST00000438964 GPX1P07203 203 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 CELA3AP09093 270 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 ALKBH6Q3KRA9 238 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 Q6ZS49 121 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 H2BFWTQ7Z2G1 175 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 RPS19BP1Q86WX3 136 aaKnown RBP11.19□□□□□ -0.62
ACTN1-204ENST00000438964 TUSC5Q8IXB3 177 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 TECTBQ96PL2 329 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 SSBP3Q9BWW4 388 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-204ENST00000438964 HSPB7Q9UBY9 170 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 CSMD1Q96PZ7 3565 aa11.19□□□□□ -0.62
ACTN1-204ENST00000438964 LINC00473A8K010 186 aa11.18□□□□□ -0.62
ACTN1-204ENST00000438964 C3orf79P0CE67 100 aa11.18□□□□□ -0.62
ACTN1-204ENST00000438964 CD1BP29016 333 aa11.18□□□□□ -0.62
ACTN1-204ENST00000438964 ZNF83P51522 516 aa11.18□□□□□ -0.62
ACTN1-204ENST00000438964 Q56UQ5 140 aa11.18□□□□□ -0.62
ACTN1-204ENST00000438964 LEMD1Q68G75 181 aa11.18□□□□□ -0.62
ACTN1-204ENST00000438964 ZNF826PQ6ZT77 177 aa11.18□□□□□ -0.62
ACTN1-204ENST00000438964 Q8N7P7 452 aa11.18□□□□□ -0.62
ACTN1-204ENST00000438964 MRGPRDQ8TDS7 321 aa11.18□□□□□ -0.62
ACTN1-204ENST00000438964 C12orf49Q9H741 205 aa11.18□□□□□ -0.62
ACTN1-204ENST00000438964 TIMM8BQ9Y5J9 83 aaPredicted RBP11.18□□□□□ -0.62
ACTN1-204ENST00000438964 PINLYPA6NC86 204 aa11.18□□□□□ -0.62
ACTN1-204ENST00000438964 C10orf142B7Z368 130 aa11.18□□□□□ -0.62
ACTN1-204ENST00000438964 NCOR1O75376 2440 aa11.18□□□□□ -0.62
ACTN1-204ENST00000438964 DYSFO75923 2080 aa11.18□□□□□ -0.62
ACTN1-204ENST00000438964 GDF1P27539 372 aa11.18□□□□□ -0.62
ACTN1-204ENST00000438964 PAFAH1B2P68402 229 aa11.18□□□□□ -0.62
ACTN1-204ENST00000438964 PDLIM3Q53GG5 364 aaPredicted RBP11.18□□□□□ -0.62
ACTN1-204ENST00000438964 KMT2EQ8IZD2 1858 aa11.18□□□□□ -0.62
ACTN1-204ENST00000438964 MCRIP2Q9BUT9 160 aaKnown RBP11.18□□□□□ -0.62
ACTN1-204ENST00000438964 TET2Q6N021 2002 aaPredicted RBP11.18□□□□□ -0.62
ACTN1-204ENST00000438964 PDE6DO43924 150 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 IGLC2P0DOY2 106 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 IGLC3P0DOY3 106 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 MGST1P10620 155 aaKnown RBP11.17□□□□□ -0.62
ACTN1-204ENST00000438964 SSTR5P35346 364 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 YPEL3P61236 119 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-204ENST00000438964 PCBD1P61457 104 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 RANP62826 216 aaKnown RBP11.17□□□□□ -0.62
ACTN1-204ENST00000438964 ANKRD39Q53RE8 183 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 C1orf174Q8IYL3 243 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 GCM1Q9NP62 436 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-204ENST00000438964 IGHV5-10-1A0A0J9YXX1 117 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 A0A1W2PS18 150 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 AHRRA9YTQ3 701 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 PSPNO60542 156 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 CCL4P13236 92 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 GATA2P23769 480 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-204ENST00000438964 CD24P25063 80 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 B3GALT5-AS1P59052 145 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 COTL1Q14019 142 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 PMCHL1Q16048 86 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 HES3Q5TGS1 186 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 HINT2Q9BX68 163 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 TIMM9Q9Y5J7 89 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 CEP250Q9BV73 2442 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 LRP5LA4QPB2 252 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 ANKRD30BLA7E2S9 258 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 C15orf62A8K5M9 175 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 NXPH2O95156 264 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 CGAP01215 116 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 OR9G9P0C7N8 305 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 LTBRP36941 435 aa11.17□□□□□ -0.62
ACTN1-204ENST00000438964 VHLLQ6RSH7 139 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms