RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 DHODHQ02127 395 aa8.43□□□□□ -1.06
HLA-DMB-259ENST00000438510 PLGLAQ15195 96 aa8.43□□□□□ -1.06
HLA-DMB-259ENST00000438510 VMA21Q3ZAQ7 101 aa8.43□□□□□ -1.06
HLA-DMB-259ENST00000438510 PLET1Q6UQ28 207 aa8.43□□□□□ -1.06
HLA-DMB-259ENST00000438510 NRARPQ7Z6K4 114 aa8.43□□□□□ -1.06
HLA-DMB-259ENST00000438510 SLC25A42Q86VD7 318 aa8.43□□□□□ -1.06
HLA-DMB-259ENST00000438510 DUSP18Q8NEJ0 188 aa8.43□□□□□ -1.06
HLA-DMB-259ENST00000438510 NPBQ8NG41 125 aa8.43□□□□□ -1.06
HLA-DMB-259ENST00000438510 VSTM2AQ8TAG5 236 aa8.43□□□□□ -1.06
HLA-DMB-259ENST00000438510 TMEM230Q96A57 120 aa8.43□□□□□ -1.06
HLA-DMB-259ENST00000438510 GALNT14Q96FL9 552 aa8.43□□□□□ -1.06
HLA-DMB-259ENST00000438510 NPFFR1Q9GZQ6 430 aa8.43□□□□□ -1.06
HLA-DMB-259ENST00000438510 RANBP3Q9H6Z4 567 aaPredicted RBP8.43□□□□□ -1.06
HLA-DMB-259ENST00000438510 TRAV6A0A075B6T7 132 aa8.42□□□□□ -1.06
HLA-DMB-259ENST00000438510 FAM181BA6NEQ2 426 aa8.42□□□□□ -1.06
HLA-DMB-259ENST00000438510 RRHO14718 337 aa8.42□□□□□ -1.06
HLA-DMB-259ENST00000438510 CREBL2O60519 120 aaPredicted RBP8.42□□□□□ -1.06
HLA-DMB-259ENST00000438510 S1PR2O95136 353 aa8.42□□□□□ -1.06
HLA-DMB-259ENST00000438510 NDUFA3O95167 84 aa8.42□□□□□ -1.06
HLA-DMB-259ENST00000438510 H2AFB2P0C5Z0 115 aa8.42□□□□□ -1.06
HLA-DMB-259ENST00000438510 OR5AC1P0C628 307 aa8.42□□□□□ -1.06
HLA-DMB-259ENST00000438510 VAMP1P23763 118 aa8.42□□□□□ -1.06
HLA-DMB-259ENST00000438510 UCP1P25874 307 aa8.42□□□□□ -1.06
HLA-DMB-259ENST00000438510 LPAR6P43657 344 aa8.42□□□□□ -1.06
HLA-DMB-259ENST00000438510 BRWD1-AS2P59051 145 aa8.42□□□□□ -1.06
HLA-DMB-259ENST00000438510 UBE2KP61086 200 aa8.42□□□□□ -1.06
HLA-DMB-259ENST00000438510 ERVK-16P61578 105 aa8.42□□□□□ -1.06
HLA-DMB-259ENST00000438510 SRPXP78539 464 aa8.42□□□□□ -1.06
HLA-DMB-259ENST00000438510 FBLN7Q53RD9 439 aa8.42□□□□□ -1.06
HLA-DMB-259ENST00000438510 C5orf56Q8N8D9 126 aa8.42□□□□□ -1.06
HLA-DMB-259ENST00000438510 R3HDM4Q96D70 268 aa8.42□□□□□ -1.06
HLA-DMB-259ENST00000438510 TP53RKQ96S44 253 aa8.42□□□□□ -1.06
HLA-DMB-259ENST00000438510 RASL11BQ9BPW5 248 aa8.42□□□□□ -1.06
HLA-DMB-259ENST00000438510 TMEM222Q9H0R3 208 aa8.42□□□□□ -1.06
HLA-DMB-259ENST00000438510 METTL1Q9UBP6 276 aaKnown RBP8.42□□□□□ -1.06
HLA-DMB-259ENST00000438510 FLVCR2Q9UPI3 526 aa8.42□□□□□ -1.06
HLA-DMB-259ENST00000438510 MARCH11A6NNE9 402 aa8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 SLC25A17O43808 307 aa8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 HLA-AP01891 365 aaKnown RBP8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 HNRNPCP07910 306 aaKnown RBP eCLIP8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 OR4E1P0C645 316 aa8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 VSIG10L2P0DP72 767 aa8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 ANXA7P20073 488 aaKnown RBP8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 CNTFRP26992 372 aa8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 MECP2P51608 486 aaKnown RBP8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 F2RL1P55085 397 aa8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 RAG2P55895 527 aa8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 SUPT4H1P63272 117 aaKnown RBP8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 PPP1R1AQ13522 171 aa8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 PSG5Q15238 335 aa8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 POU2AF1Q16633 256 aa8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 C5orf64Q2M2E5 130 aa8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 SP6Q3SY56 376 aa8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 C4orf46Q504U0 113 aa8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 ZNF585BQ52M93 769 aa8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 ZNF695Q8IW36 515 aa8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 FAM71E2Q8N5Q1 922 aa8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 Q8N9W7 124 aa8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 TEX45Q8NA69 505 aa8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 DMBX1Q8NFW5 382 aa8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 RITA1Q96K30 269 aa8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 RHOVQ96L33 236 aa8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 ALX4Q9H161 411 aaPredicted RBP8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 PLSCR3Q9NRY6 295 aa8.41□□□□□ -1.06
HLA-DMB-259ENST00000438510 KCNAB3O43448 404 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 PRAF2O60831 178 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 OR2A4O95047 310 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 SFT2D2O95562 160 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 CDS2O95674 445 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 DHFRP00374 187 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 KRASP01116 189 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 IGLV2-23P01705 113 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 HLA-DRB1P01911 266 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 SAA1P0DJI8 122 aaPredicted RBP8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 AKR1C2P52895 323 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 RAB25P57735 213 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 TMEM187Q14656 261 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 ARSJQ5FYB0 599 aaPredicted RBP8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 OR4A47Q6IF82 309 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 LYG2Q86SG7 212 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 PPP1R27Q86WC6 154 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 CADM3Q8N126 398 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 LGI3Q8N145 548 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 OR4A5Q8NH83 315 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 RNASE11Q8TAA1 199 aaKnown RBP8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 GLYATL2Q8WU03 294 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 RBPMSQ93062 196 aaKnown RBP8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 IL22RA2Q969J5 263 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 RBMXL1Q96E39 390 aaKnown RBP8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 RRNAD1Q96FB5 475 aaKnown RBP8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 TMEM56Q96MV1 263 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 OR2A7Q96R45 310 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 MARVELD1Q9BSK0 173 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 PRSS22Q9GZN4 317 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 FBXL15Q9H469 300 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 BET1LQ9NYM9 111 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 SIGLEC9Q9Y336 463 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 TMEM56-RWDD3S4R434 201 aa8.4□□□□□ -1.06
HLA-DMB-259ENST00000438510 DUXBA0A1W2PPF3 345 aa8.39□□□□□ -1.07
HLA-DMB-259ENST00000438510 C9orf170A2RU37 121 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms