RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 PLPPR2Q96GM1 343 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 A0A1B0GUT8 65 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 HTN1P15515 57 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 TMEM249Q2WGJ8 235 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 PIGYQ3MUY2 71 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 MBNL2Q5VZF2 373 aaKnown RBP9.99□□□□□ -0.81
PTCH1-209ENST00000437951 ZNF562Q6V9R5 426 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 NR2C2APQ86WQ0 139 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 NKX2-8O15522 239 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 CBLN1P23435 193 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 SAMD5Q5TGI4 173 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 SELENOHQ8IZQ5 122 aaKnown RBP9.99□□□□□ -0.81
PTCH1-209ENST00000437951 KIR3DL3Q8N743 410 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 PLXNA1Q9UIW2 1896 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 A0A1W2PPC1 479 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 FAM181AQ8N9Y4 354 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 SCGB3A1Q96QR1 104 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 SMPXQ9UHP9 88 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 CNOT1A5YKK6 2376 aaKnown RBP9.98□□□□□ -0.81
PTCH1-209ENST00000437951 LMO7DNF2Z398 122 aa9.98□□□□□ -0.81
PTCH1-209ENST00000437951 ORMDL3Q8N138 153 aa9.98□□□□□ -0.81
PTCH1-209ENST00000437951 SSPNQ14714 243 aa9.98□□□□□ -0.81
PTCH1-209ENST00000437951 ACSF3Q4G176 576 aaPredicted RBP9.98□□□□□ -0.81
PTCH1-209ENST00000437951 INO80CQ6PI98 192 aaPredicted RBP9.98□□□□□ -0.81
PTCH1-209ENST00000437951 C1QL4Q86Z23 238 aa9.98□□□□□ -0.81
PTCH1-209ENST00000437951 LURAP1LQ8IV03 231 aa9.98□□□□□ -0.81
PTCH1-209ENST00000437951 C3orf80F5H4A9 247 aa9.98□□□□□ -0.81
PTCH1-209ENST00000437951 RPL27AP46776 148 aaKnown RBP9.98□□□□□ -0.81
PTCH1-209ENST00000437951 OR10W1Q8NGF6 305 aa9.98□□□□□ -0.81
PTCH1-209ENST00000437951 CEACAM5P06731 702 aa9.98□□□□□ -0.81
PTCH1-209ENST00000437951 NUTF2P61970 127 aaKnown RBP9.98□□□□□ -0.81
PTCH1-209ENST00000437951 FNDC4Q9H6D8 234 aaPredicted RBP9.98□□□□□ -0.81
PTCH1-209ENST00000437951 PLNP26678 52 aa9.98□□□□□ -0.81
PTCH1-209ENST00000437951 P2RY4P51582 365 aa9.98□□□□□ -0.81
PTCH1-209ENST00000437951 GATAD1Q8WUU5 269 aa9.98□□□□□ -0.81
PTCH1-209ENST00000437951 TRBV5-5A0A0J9YX44 114 aa9.97□□□□□ -0.81
PTCH1-209ENST00000437951 APOHP02749 345 aaPredicted RBP9.97□□□□□ -0.81
PTCH1-209ENST00000437951 MFAP4P55083 255 aa9.97□□□□□ -0.81
PTCH1-209ENST00000437951 PSG6Q00889 435 aa9.97□□□□□ -0.81
PTCH1-209ENST00000437951 LAMTOR1Q6IAA8 161 aa9.97□□□□□ -0.81
PTCH1-209ENST00000437951 WFDC5Q8TCV5 224 aa9.97□□□□□ -0.81
PTCH1-209ENST00000437951 J3KRW8 73 aa9.97□□□□□ -0.81
PTCH1-209ENST00000437951 ZNF658BQ4V348 819 aaPredicted RBP9.97□□□□□ -0.81
PTCH1-209ENST00000437951 ZNF793Q6ZN11 406 aa9.97□□□□□ -0.81
PTCH1-209ENST00000437951 RAX2Q96IS3 184 aa9.97□□□□□ -0.81
PTCH1-209ENST00000437951 Q6ZNB5 142 aa9.97□□□□□ -0.81
PTCH1-209ENST00000437951 SLC25A15Q9Y619 301 aa9.97□□□□□ -0.81
PTCH1-209ENST00000437951 MYLKQ15746 1914 aa9.97□□□□□ -0.81
PTCH1-209ENST00000437951 ZNF56Q15929 161 aa9.97□□□□□ -0.81
PTCH1-209ENST00000437951 CEACAM21Q3KPI0 293 aa9.97□□□□□ -0.81
PTCH1-209ENST00000437951 TMEM106BQ9NUM4 274 aa9.97□□□□□ -0.81
PTCH1-209ENST00000437951 FXYD3Q14802 87 aa9.97□□□□□ -0.81
PTCH1-209ENST00000437951 NRAPQ86VF7 1730 aa9.97□□□□□ -0.81
PTCH1-209ENST00000437951 SYNGR3O43761 229 aa9.97□□□□□ -0.81
PTCH1-209ENST00000437951 ZP4Q12836 540 aa9.97□□□□□ -0.81
PTCH1-209ENST00000437951 RNF182Q8N6D2 247 aa9.97□□□□□ -0.81
PTCH1-209ENST00000437951 TMEM242Q9NWH2 141 aa9.97□□□□□ -0.81
PTCH1-209ENST00000437951 HYAL3O43820 417 aaPredicted RBP9.96□□□□□ -0.81
PTCH1-209ENST00000437951 HMGA1P17096 107 aaKnown RBP9.96□□□□□ -0.81
PTCH1-209ENST00000437951 DMRTC1Q5HYR2 192 aa9.96□□□□□ -0.81
PTCH1-209ENST00000437951 GNB1LQ9BYB4 327 aa9.96□□□□□ -0.81
PTCH1-209ENST00000437951 CRYBB3P26998 211 aa9.96□□□□□ -0.81
PTCH1-209ENST00000437951 IFITM3Q01628 133 aa9.96□□□□□ -0.81
PTCH1-209ENST00000437951 DPM2O94777 84 aa9.96□□□□□ -0.81
PTCH1-209ENST00000437951 FAM106CPP0CH98 169 aa9.96□□□□□ -0.81
PTCH1-209ENST00000437951 GCHFRP30047 84 aa9.96□□□□□ -0.81
PTCH1-209ENST00000437951 COL10A1Q03692 680 aa9.96□□□□□ -0.81
PTCH1-209ENST00000437951 KRTCAP3Q53RY4 240 aa9.96□□□□□ -0.81
PTCH1-209ENST00000437951 PLPPR1Q8TBJ4 325 aa9.96□□□□□ -0.81
PTCH1-209ENST00000437951 PCNX1Q96RV3 2341 aa9.96□□□□□ -0.81
PTCH1-209ENST00000437951 A0A1B0GTL3 188 aa9.96□□□□□ -0.81
PTCH1-209ENST00000437951 A0A1W2PP11 408 aa9.96□□□□□ -0.81
PTCH1-209ENST00000437951 ZNF585BQ52M93 769 aa9.96□□□□□ -0.81
PTCH1-209ENST00000437951 YBX2Q9Y2T7 364 aaKnown RBP9.96□□□□□ -0.81
PTCH1-209ENST00000437951 LOXL3P58215 753 aa9.96□□□□□ -0.82
PTCH1-209ENST00000437951 PLAURQ03405 335 aa9.96□□□□□ -0.82
PTCH1-209ENST00000437951 VSTM2LQ96N03 204 aa9.96□□□□□ -0.82
PTCH1-209ENST00000437951 GGTLC3B5MD39 225 aa9.96□□□□□ -0.82
PTCH1-209ENST00000437951 CD200R1LQ6Q8B3 271 aa9.96□□□□□ -0.82
PTCH1-209ENST00000437951 CIARTQ8N365 385 aaPredicted RBP9.96□□□□□ -0.82
PTCH1-209ENST00000437951 MRPS18BQ9Y676 258 aaKnown RBP9.96□□□□□ -0.82
PTCH1-209ENST00000437951 USP54Q70EL1 1684 aa9.96□□□□□ -0.82
PTCH1-209ENST00000437951 WIPI1Q5MNZ9 446 aaPredicted RBP9.96□□□□□ -0.82
PTCH1-209ENST00000437951 FOXC2Q99958 501 aa9.96□□□□□ -0.82
PTCH1-209ENST00000437951 SLC25A10Q9UBX3 287 aaPredicted RBP9.96□□□□□ -0.82
PTCH1-209ENST00000437951 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-209ENST00000437951 CD3EP07766 207 aa9.95□□□□□ -0.82
PTCH1-209ENST00000437951 MMDQ15546 238 aa9.95□□□□□ -0.82
PTCH1-209ENST00000437951 RTN4RQ9BZR6 473 aa9.95□□□□□ -0.82
PTCH1-209ENST00000437951 RPP21Q9H633 154 aaKnown RBP9.95□□□□□ -0.82
PTCH1-209ENST00000437951 TRAV21A0A0B4J279 112 aa9.95□□□□□ -0.82
PTCH1-209ENST00000437951 DLEU1O43261 78 aa9.95□□□□□ -0.82
PTCH1-209ENST00000437951 TNFSF13O75888 250 aa9.95□□□□□ -0.82
PTCH1-209ENST00000437951 C1orf100Q5SVJ3 147 aa9.95□□□□□ -0.82
PTCH1-209ENST00000437951 MIC13Q5XKP0 118 aa9.95□□□□□ -0.82
PTCH1-209ENST00000437951 PLSCR4Q9NRQ2 329 aa9.95□□□□□ -0.82
PTCH1-209ENST00000437951 CDIPTO14735 213 aa9.95□□□□□ -0.82
PTCH1-209ENST00000437951 TNFSF14O43557 240 aa9.95□□□□□ -0.82
PTCH1-209ENST00000437951 GPX1P07203 203 aa9.95□□□□□ -0.82
PTCH1-209ENST00000437951 PAX1P15863 534 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms