RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 MS4A7Q9GZW8 240 aaPredicted RBP18.51■□□□□ 0.55
CPSF4-204ENST00000436336 RANGRFQ9HD47 186 aaPredicted RBP18.51■□□□□ 0.55
CPSF4-204ENST00000436336 A0A0U1RQK1 487 aa18.5■□□□□ 0.55
CPSF4-204ENST00000436336 VENTXO95231 258 aa18.5■□□□□ 0.55
CPSF4-204ENST00000436336 P0C879 139 aa18.5■□□□□ 0.55
CPSF4-204ENST00000436336 BRS3P32247 399 aa18.5■□□□□ 0.55
CPSF4-204ENST00000436336 IAH1Q2TAA2 248 aaPredicted RBP18.5■□□□□ 0.55
CPSF4-204ENST00000436336 GPR146Q96CH1 333 aa18.5■□□□□ 0.55
CPSF4-204ENST00000436336 RBMXL1Q96E39 390 aaKnown RBP18.5■□□□□ 0.55
CPSF4-204ENST00000436336 RHOVQ96L33 236 aa18.5■□□□□ 0.55
CPSF4-204ENST00000436336 MEGF9Q9H1U4 602 aa18.5■□□□□ 0.55
CPSF4-204ENST00000436336 FAM96BQ9Y3D0 163 aa18.5■□□□□ 0.55
CPSF4-204ENST00000436336 SLC25A6P12236 298 aa18.49■□□□□ 0.55
CPSF4-204ENST00000436336 RPS16P62249 146 aaKnown RBP18.49■□□□□ 0.55
CPSF4-204ENST00000436336 CYCSP99999 105 aaKnown RBP18.49■□□□□ 0.55
CPSF4-204ENST00000436336 H2BFWTQ7Z2G1 175 aa18.49■□□□□ 0.55
CPSF4-204ENST00000436336 RNF5Q99942 180 aa18.49■□□□□ 0.55
CPSF4-204ENST00000436336 NMES1Q9C002 83 aa18.49■□□□□ 0.55
CPSF4-204ENST00000436336 RANBP3Q9H6Z4 567 aaPredicted RBP18.49■□□□□ 0.55
CPSF4-204ENST00000436336 FLNBO75369 2602 aaKnown RBP18.49■□□□□ 0.55
CPSF4-204ENST00000436336 FAM90A9PA6NNJ1 464 aa18.49■□□□□ 0.55
CPSF4-204ENST00000436336 LGALS7P47929 136 aa18.49■□□□□ 0.55
CPSF4-204ENST00000436336 THOC7Q6I9Y2 204 aaKnown RBP18.49■□□□□ 0.55
CPSF4-204ENST00000436336 SSX9Q7RTT3 188 aa18.49■□□□□ 0.55
CPSF4-204ENST00000436336 SVEP1Q4LDE5 3571 aa18.48■□□□□ 0.55
CPSF4-204ENST00000436336 A0A1B0GU03 582 aa18.48■□□□□ 0.55
CPSF4-204ENST00000436336 SRRM4A7MD48 611 aaKnown RBP18.48■□□□□ 0.55
CPSF4-204ENST00000436336 IGKV1D-33P01593 117 aa18.48■□□□□ 0.55
CPSF4-204ENST00000436336 IGKV1-33P01594 117 aa18.48■□□□□ 0.55
CPSF4-204ENST00000436336 FBP1P09467 338 aa18.48■□□□□ 0.55
CPSF4-204ENST00000436336 RAP2BP61225 183 aa18.48■□□□□ 0.55
CPSF4-204ENST00000436336 VKORC1L1Q8N0U8 176 aa18.48■□□□□ 0.55
CPSF4-204ENST00000436336 ZBTB8BQ8NAP8 495 aaPredicted RBP18.48■□□□□ 0.55
CPSF4-204ENST00000436336 FYTTD1Q96QD9 318 aaKnown RBP18.48■□□□□ 0.55
CPSF4-204ENST00000436336 TMEM140Q9NV12 185 aa18.48■□□□□ 0.55
CPSF4-204ENST00000436336 SNRNP70P08621 437 aaKnown RBP18.47■□□□□ 0.55
CPSF4-204ENST00000436336 EBI3Q14213 229 aa18.47■□□□□ 0.55
CPSF4-204ENST00000436336 CSPG4Q6UVK1 2322 aa18.47■□□□□ 0.55
CPSF4-204ENST00000436336 C9orf139Q6ZV77 190 aa18.47■□□□□ 0.55
CPSF4-204ENST00000436336 THNSL2Q86YJ6 484 aa18.47■□□□□ 0.55
CPSF4-204ENST00000436336 OR2T10Q8NGZ9 312 aa18.47■□□□□ 0.55
CPSF4-204ENST00000436336 WDR89Q96FK6 387 aaPredicted RBP18.47■□□□□ 0.55
CPSF4-204ENST00000436336 MOSP00540 346 aa18.46■□□□□ 0.55
CPSF4-204ENST00000436336 DYNLT3P51808 116 aa18.46■□□□□ 0.55
CPSF4-204ENST00000436336 SMCO1Q147U7 214 aa18.46■□□□□ 0.55
CPSF4-204ENST00000436336 IZUMO4Q1ZYL8 232 aa18.46■□□□□ 0.55
CPSF4-204ENST00000436336 OR4A47Q6IF82 309 aa18.46■□□□□ 0.55
CPSF4-204ENST00000436336 Q6ZRM9 215 aa18.46■□□□□ 0.55
CPSF4-204ENST00000436336 TCTE3Q8IZS6 198 aa18.46■□□□□ 0.55
CPSF4-204ENST00000436336 RITA1Q96K30 269 aa18.46■□□□□ 0.55
CPSF4-204ENST00000436336 YAE1D1Q9NRH1 226 aa18.46■□□□□ 0.55
CPSF4-204ENST00000436336 COA4Q9NYJ1 87 aa18.46■□□□□ 0.55
CPSF4-204ENST00000436336 GSKIPQ9P0R6 139 aa18.46■□□□□ 0.55
CPSF4-204ENST00000436336 CACNG5Q9UF02 275 aa18.46■□□□□ 0.55
CPSF4-204ENST00000436336 CELSR1Q9NYQ6 3014 aa18.46■□□□□ 0.55
CPSF4-204ENST00000436336 IGLV2-23P01705 113 aa18.46■□□□□ 0.55
CPSF4-204ENST00000436336 CD300CQ08708 224 aa18.46■□□□□ 0.55
CPSF4-204ENST00000436336 IL15RAQ13261 267 aa18.46■□□□□ 0.55
CPSF4-204ENST00000436336 VSTM2AQ8TAG5 236 aa18.46■□□□□ 0.55
CPSF4-204ENST00000436336 EAF1Q96JC9 268 aaPredicted RBP18.46■□□□□ 0.55
CPSF4-204ENST00000436336 TSNAXQ99598 290 aaKnown RBP18.46■□□□□ 0.55
CPSF4-204ENST00000436336 BET1LQ9NYM9 111 aa18.46■□□□□ 0.55
CPSF4-204ENST00000436336 SOX21Q9Y651 276 aaPredicted RBP18.46■□□□□ 0.55
CPSF4-204ENST00000436336 FAM106CPP0CH98 169 aa18.45■□□□□ 0.54
CPSF4-204ENST00000436336 SAA1P0DJI8 122 aaPredicted RBP18.45■□□□□ 0.54
CPSF4-204ENST00000436336 CD24P25063 80 aa18.45■□□□□ 0.54
CPSF4-204ENST00000436336 HES1Q14469 280 aa18.45■□□□□ 0.54
CPSF4-204ENST00000436336 VMA21Q3ZAQ7 101 aa18.45■□□□□ 0.54
CPSF4-204ENST00000436336 PUSL1Q8N0Z8 303 aaKnown RBP18.45■□□□□ 0.54
CPSF4-204ENST00000436336 OR4D5Q8NGN0 318 aa18.45■□□□□ 0.54
CPSF4-204ENST00000436336 OTOGQ6ZRI0 2925 aa18.45■□□□□ 0.54
CPSF4-204ENST00000436336 PITX3O75364 302 aa18.44■□□□□ 0.54
CPSF4-204ENST00000436336 IL6RP08887 468 aaPredicted RBP18.44■□□□□ 0.54
CPSF4-204ENST00000436336 OR9G9P0C7N8 305 aa18.44■□□□□ 0.54
CPSF4-204ENST00000436336 UBE2KP61086 200 aa18.44■□□□□ 0.54
CPSF4-204ENST00000436336 FAM120AOSQ5T036 256 aa18.44■□□□□ 0.54
CPSF4-204ENST00000436336 OR1S1Q8NH92 325 aa18.44■□□□□ 0.54
CPSF4-204ENST00000436336 OR2T35Q8NGX2 323 aa18.43■□□□□ 0.54
CPSF4-204ENST00000436336 TMUB1Q9BVT8 246 aa18.43■□□□□ 0.54
CPSF4-204ENST00000436336 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.43■□□□□ 0.54
CPSF4-204ENST00000436336 TET2Q6N021 2002 aaPredicted RBP18.43■□□□□ 0.54
CPSF4-204ENST00000436336 SPDEFO95238 335 aa18.43■□□□□ 0.54
CPSF4-204ENST00000436336 FOSL1P15407 271 aa18.43■□□□□ 0.54
CPSF4-204ENST00000436336 AANATQ16613 207 aa18.43■□□□□ 0.54
CPSF4-204ENST00000436336 LRRC75BQ2VPJ9 315 aa18.43■□□□□ 0.54
CPSF4-204ENST00000436336 BCL6BQ8N143 479 aaPredicted RBP18.43■□□□□ 0.54
CPSF4-204ENST00000436336 Q8N6K4 173 aa18.43■□□□□ 0.54
CPSF4-204ENST00000436336 OR4A5Q8NH83 315 aa18.43■□□□□ 0.54
CPSF4-204ENST00000436336 PPP1R1CQ8WVI7 109 aa18.43■□□□□ 0.54
CPSF4-204ENST00000436336 SLC25A17O43808 307 aa18.42■□□□□ 0.54
CPSF4-204ENST00000436336 KBTBD11O94819 623 aa18.42■□□□□ 0.54
CPSF4-204ENST00000436336 CD99P14209 185 aa18.42■□□□□ 0.54
CPSF4-204ENST00000436336 TMEM11P17152 192 aa18.42■□□□□ 0.54
CPSF4-204ENST00000436336 CNTFRP26992 372 aa18.42■□□□□ 0.54
CPSF4-204ENST00000436336 RELBQ01201 579 aa18.42■□□□□ 0.54
CPSF4-204ENST00000436336 HNF4GQ14541 408 aa18.42■□□□□ 0.54
CPSF4-204ENST00000436336 PSG5Q15238 335 aa18.42■□□□□ 0.54
CPSF4-204ENST00000436336 TEX45Q8NA69 505 aa18.42■□□□□ 0.54
CPSF4-204ENST00000436336 OR4A16Q8NH70 328 aa18.42■□□□□ 0.54
CPSF4-204ENST00000436336 SSX3Q99909 188 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms