RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 IGLL1P15814 213 aa12.67□□□□□ -0.38
SMPD4-207ENST00000435455 RCVRNP35243 200 aa12.67□□□□□ -0.38
SMPD4-207ENST00000435455 RFX2P48378 723 aa12.67□□□□□ -0.38
SMPD4-207ENST00000435455 PRSS8Q16651 343 aa12.67□□□□□ -0.38
SMPD4-207ENST00000435455 OR2B11Q5JQS5 317 aa12.67□□□□□ -0.38
SMPD4-207ENST00000435455 TMEM17Q86X19 198 aa12.67□□□□□ -0.38
SMPD4-207ENST00000435455 GPR61Q9BZJ8 451 aa12.67□□□□□ -0.38
SMPD4-207ENST00000435455 WIPF1O43516 503 aa12.66□□□□□ -0.38
SMPD4-207ENST00000435455 SOX15O60248 233 aa12.66□□□□□ -0.38
SMPD4-207ENST00000435455 HRH1P35367 487 aa12.66□□□□□ -0.38
SMPD4-207ENST00000435455 SSBP2P81877 361 aaPredicted RBP12.66□□□□□ -0.38
SMPD4-207ENST00000435455 RUNX1Q01196 453 aa12.66□□□□□ -0.38
SMPD4-207ENST00000435455 CATR1Q13166 79 aa12.66□□□□□ -0.38
SMPD4-207ENST00000435455 KIAA0141Q14154 515 aaPredicted RBP12.66□□□□□ -0.38
SMPD4-207ENST00000435455 PDLIM3Q53GG5 364 aaPredicted RBP12.66□□□□□ -0.38
SMPD4-207ENST00000435455 LYSMD2Q8IV50 215 aa12.66□□□□□ -0.38
SMPD4-207ENST00000435455 OR6F1Q8NGZ6 308 aa12.66□□□□□ -0.38
SMPD4-207ENST00000435455 C15orf40Q8WUR7 153 aa12.66□□□□□ -0.38
SMPD4-207ENST00000435455 MOB3AQ96BX8 217 aa12.66□□□□□ -0.38
SMPD4-207ENST00000435455 TMEM68Q96MH6 324 aa12.66□□□□□ -0.38
SMPD4-207ENST00000435455 AIFM2Q9BRQ8 373 aa12.66□□□□□ -0.38
SMPD4-207ENST00000435455 ZNF2Q9BSG1 426 aaPredicted RBP12.66□□□□□ -0.38
SMPD4-207ENST00000435455 MCRIP2Q9BUT9 160 aaKnown RBP12.66□□□□□ -0.38
SMPD4-207ENST00000435455 EXTL2Q9UBQ6 330 aa12.66□□□□□ -0.38
SMPD4-207ENST00000435455 I3L521 148 aa12.65□□□□□ -0.38
SMPD4-207ENST00000435455 RBFOX2O43251 390 aaKnown RBP eCLIP12.65□□□□□ -0.387e-8■■■■■ 165.4
SMPD4-207ENST00000435455 ACTL6BO94805 426 aa12.65□□□□□ -0.38
SMPD4-207ENST00000435455 HRASP01112 189 aa12.65□□□□□ -0.38
SMPD4-207ENST00000435455 SAA1P0DJI8 122 aaPredicted RBP12.65□□□□□ -0.38
SMPD4-207ENST00000435455 HLA-DMAP28067 261 aa12.65□□□□□ -0.38
SMPD4-207ENST00000435455 TNXAQ16473 311 aa12.65□□□□□ -0.38
SMPD4-207ENST00000435455 DEFB136Q30KP8 78 aa12.65□□□□□ -0.38
SMPD4-207ENST00000435455 IDO2Q6ZQW0 420 aa12.65□□□□□ -0.38
SMPD4-207ENST00000435455 ZNF818PQ6ZRF7 136 aa12.65□□□□□ -0.38
SMPD4-207ENST00000435455 MMD2Q8IY49 270 aa12.65□□□□□ -0.38
SMPD4-207ENST00000435455 VSTM2AQ8TAG5 236 aa12.65□□□□□ -0.38
SMPD4-207ENST00000435455 DUX3Q96PT4 197 aa12.65□□□□□ -0.38
SMPD4-207ENST00000435455 SLA2Q9H6Q3 261 aa12.65□□□□□ -0.38
SMPD4-207ENST00000435455 CCDC59Q9P031 241 aaKnown RBP12.65□□□□□ -0.38
SMPD4-207ENST00000435455 SCOCQ9UIL1 159 aa12.65□□□□□ -0.38
SMPD4-207ENST00000435455 TGP01266 2768 aa12.64□□□□□ -0.39
SMPD4-207ENST00000435455 H3BUA1 57 aa12.64□□□□□ -0.39
SMPD4-207ENST00000435455 RGS5O15539 181 aa12.64□□□□□ -0.39
SMPD4-207ENST00000435455 TNFSF12O43508 249 aa12.64□□□□□ -0.39
SMPD4-207ENST00000435455 RAB25P57735 213 aa12.64□□□□□ -0.39
SMPD4-207ENST00000435455 BRWD1-AS2P59051 145 aa12.64□□□□□ -0.39
SMPD4-207ENST00000435455 TSPAN5P62079 268 aa12.64□□□□□ -0.39
SMPD4-207ENST00000435455 MRGPRG-AS1Q2M3A8 158 aa12.64□□□□□ -0.39
SMPD4-207ENST00000435455 REC114Q7Z4M0 266 aa12.64□□□□□ -0.39
SMPD4-207ENST00000435455 SPAG16Q8N0X2 631 aa12.64□□□□□ -0.39
SMPD4-207ENST00000435455 POC5Q8NA72 575 aa12.64□□□□□ -0.39
SMPD4-207ENST00000435455 DYNC2LI1Q8TCX1 351 aa12.64□□□□□ -0.39
SMPD4-207ENST00000435455 RHOVQ96L33 236 aa12.64□□□□□ -0.39
SMPD4-207ENST00000435455 GPHA2Q96T91 129 aa12.64□□□□□ -0.39
SMPD4-207ENST00000435455 ZNF430Q9H8G1 570 aaPredicted RBP12.64□□□□□ -0.39
SMPD4-207ENST00000435455 GNB4Q9HAV0 340 aa12.64□□□□□ -0.39
SMPD4-207ENST00000435455 OR2A4O95047 310 aa12.63□□□□□ -0.39
SMPD4-207ENST00000435455 GNRHRP30968 328 aa12.63□□□□□ -0.39
SMPD4-207ENST00000435455 FHL3Q13643 280 aa12.63□□□□□ -0.39
SMPD4-207ENST00000435455 OR11H1Q8NG94 326 aa12.63□□□□□ -0.39
SMPD4-207ENST00000435455 CD300LFQ8TDQ1 290 aa12.63□□□□□ -0.39
SMPD4-207ENST00000435455 SRSF12Q8WXF0 261 aaKnown RBP12.63□□□□□ -0.39
SMPD4-207ENST00000435455 ISOC1Q96CN7 298 aa12.63□□□□□ -0.39
SMPD4-207ENST00000435455 OR2A7Q96R45 310 aa12.63□□□□□ -0.39
SMPD4-207ENST00000435455 PHB2Q99623 299 aa12.63□□□□□ -0.39
SMPD4-207ENST00000435455 SPIN2AQ99865 258 aa12.63□□□□□ -0.39
SMPD4-207ENST00000435455 SPIN2BQ9BPZ2 258 aa12.63□□□□□ -0.39
SMPD4-207ENST00000435455 MIXL1Q9H2W2 232 aa12.63□□□□□ -0.39
SMPD4-207ENST00000435455 ZNF355PQ9NSJ1 428 aa12.63□□□□□ -0.39
SMPD4-207ENST00000435455 MSGN1A6NI15 193 aa12.62□□□□□ -0.39
SMPD4-207ENST00000435455 H3BMQ9 156 aa12.62□□□□□ -0.39
SMPD4-207ENST00000435455 KBTBD11O94819 623 aa12.62□□□□□ -0.39
SMPD4-207ENST00000435455 TRGV3P03979 118 aa12.62□□□□□ -0.39
SMPD4-207ENST00000435455 OR8U8P0C7N1 319 aa12.62□□□□□ -0.39
SMPD4-207ENST00000435455 TPPP2P59282 170 aa12.62□□□□□ -0.39
SMPD4-207ENST00000435455 ZNF616Q08AN1 781 aa12.62□□□□□ -0.39
SMPD4-207ENST00000435455 AADACL3Q5VUY0 350 aa12.62□□□□□ -0.39
SMPD4-207ENST00000435455 FOXB2Q5VYV0 432 aa12.62□□□□□ -0.39
SMPD4-207ENST00000435455 LPCAT3Q6P1A2 487 aa12.62□□□□□ -0.39
SMPD4-207ENST00000435455 LAX1Q8IWV1 398 aa12.62□□□□□ -0.39
SMPD4-207ENST00000435455 CMTM1Q8IZ96 169 aa12.62□□□□□ -0.39
SMPD4-207ENST00000435455 VKORC1L1Q8N0U8 176 aa12.62□□□□□ -0.39
SMPD4-207ENST00000435455 PUSL1Q8N0Z8 303 aaKnown RBP12.62□□□□□ -0.39
SMPD4-207ENST00000435455 OR5T1Q8NG75 326 aa12.62□□□□□ -0.39
SMPD4-207ENST00000435455 OR1N2Q8NGR9 330 aa12.62□□□□□ -0.39
SMPD4-207ENST00000435455 OR51H1Q8NH63 302 aa12.62□□□□□ -0.39
SMPD4-207ENST00000435455 OR52I2Q8NH67 350 aa12.62□□□□□ -0.39
SMPD4-207ENST00000435455 TMEM167AQ8TBQ9 72 aa12.62□□□□□ -0.39
SMPD4-207ENST00000435455 CASTOR1Q8WTX7 329 aa12.62□□□□□ -0.39
SMPD4-207ENST00000435455 DPF1Q92782 380 aa12.62□□□□□ -0.39
SMPD4-207ENST00000435455 MS4A10Q96PG2 267 aa12.62□□□□□ -0.39
SMPD4-207ENST00000435455 OR5B12Q96R08 314 aa12.62□□□□□ -0.39
SMPD4-207ENST00000435455 FXYD6Q9H0Q3 95 aa12.62□□□□□ -0.39
SMPD4-207ENST00000435455 GPR31O00270 319 aa12.61□□□□□ -0.39
SMPD4-207ENST00000435455 CTDSP2O14595 271 aa12.61□□□□□ -0.39
SMPD4-207ENST00000435455 MPPED1O15442 326 aa12.61□□□□□ -0.39
SMPD4-207ENST00000435455 RAMP3O60896 148 aa12.61□□□□□ -0.39
SMPD4-207ENST00000435455 BRI3O95415 125 aa12.61□□□□□ -0.39
SMPD4-207ENST00000435455 LGALS1P09382 135 aaKnown RBP12.61□□□□□ -0.39
SMPD4-207ENST00000435455 TBPP20226 339 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms