RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 C17orf58Q2M2W7 97 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 RPL39P5Q59GN2 51 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 SPINK9Q5DT21 86 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 ALKBH2Q6NS38 261 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 SLC16A13Q7RTY0 426 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 ZNRF1Q8ND25 227 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 Q8TCH9 128 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 DDB2Q92466 427 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 ENY2Q9NPA8 101 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 TMEM140Q9NV12 185 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 IDI2-AS1Q9NZ38 188 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 DOK5Q9P104 306 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 FAM186AA6NE01 2351 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 KIAA2026Q5HYC2 2103 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 F6UZH7 168 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 PDE6DO43924 150 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 HRASP01112 189 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 IRF2P14316 349 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 B2MP61769 119 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 RPL23P62829 140 aaKnown RBP8.62□□□□□ -1.03
CD44-210ENST00000434472 CTAG1AP78358 180 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 NCMAPQ5T1S8 102 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 STUMQ69YW2 141 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 VHLLQ6RSH7 139 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 SSX9Q7RTT3 188 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 SSX8Q7RTT4 187 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 TGIF2LYQ8IUE0 185 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 NUP37Q8NFH4 326 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 CORO2AQ92828 525 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 RPUSD4Q96CM3 377 aaKnown RBP8.62□□□□□ -1.03
CD44-210ENST00000434472 PARLQ9H300 379 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 OR51M1Q9H341 326 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 NIT2Q9NQR4 276 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 TCF19Q9Y242 345 aa8.62□□□□□ -1.03
CD44-210ENST00000434472 FOXA2Q9Y261 457 aaPredicted RBP8.62□□□□□ -1.03
CD44-210ENST00000434472 MYO15AQ9UKN7 3530 aa8.61□□□□□ -1.03
CD44-210ENST00000434472 C15orf61A6NNL5 157 aa8.61□□□□□ -1.03
CD44-210ENST00000434472 H7BYZ3 331 aa8.61□□□□□ -1.03
CD44-210ENST00000434472 ATXN7O15265 892 aaPredicted RBP8.61□□□□□ -1.03
CD44-210ENST00000434472 GFRA3O60609 400 aa8.61□□□□□ -1.03
CD44-210ENST00000434472 PAGE4O60829 102 aa8.61□□□□□ -1.03
CD44-210ENST00000434472 IGHV1-46P01743 117 aa8.61□□□□□ -1.03
CD44-210ENST00000434472 TRGC2P03986 189 aa8.61□□□□□ -1.03
CD44-210ENST00000434472 ZNF134P52741 427 aa8.61□□□□□ -1.03
CD44-210ENST00000434472 ATP5IP56385 69 aaPredicted RBP8.61□□□□□ -1.03
CD44-210ENST00000434472 LINC00205P59089 165 aa8.61□□□□□ -1.03
CD44-210ENST00000434472 HSPE1P61604 102 aaKnown RBP8.61□□□□□ -1.03
CD44-210ENST00000434472 RPS16P62249 146 aaKnown RBP8.61□□□□□ -1.03
CD44-210ENST00000434472 MRPS11P82912 194 aaKnown RBP8.61□□□□□ -1.03
CD44-210ENST00000434472 POU2AF1Q16633 256 aa8.61□□□□□ -1.03
CD44-210ENST00000434472 CT45A1Q5HYN5 189 aa8.61□□□□□ -1.03
CD44-210ENST00000434472 C16orf82Q7Z2V1 217 aa8.61□□□□□ -1.03
CD44-210ENST00000434472 OR10A7Q8NGE5 316 aa8.61□□□□□ -1.03
CD44-210ENST00000434472 CT45A3Q8NHU0 189 aa8.61□□□□□ -1.03
CD44-210ENST00000434472 BTF3L4Q96K17 158 aa8.61□□□□□ -1.03
CD44-210ENST00000434472 GAFA1Q96PS6 74 aa8.61□□□□□ -1.03
CD44-210ENST00000434472 PYGO2Q9BRQ0 406 aa8.61□□□□□ -1.03
CD44-210ENST00000434472 SRD5A3Q9H8P0 318 aa8.61□□□□□ -1.03
CD44-210ENST00000434472 LINC00574Q9H8X3 128 aa8.61□□□□□ -1.03
CD44-210ENST00000434472 NPVFQ9HCQ7 196 aa8.61□□□□□ -1.03
CD44-210ENST00000434472 GAR1Q9NY12 217 aaKnown RBP8.61□□□□□ -1.03
CD44-210ENST00000434472 CHD3Q12873 2000 aaKnown RBP8.6□□□□□ -1.03
CD44-210ENST00000434472 NKX6-3A6NJ46 265 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 A8MXE2 369 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 C11orf94C9JXX5 98 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 PRSS46E5RG02 174 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 FNDC10F2Z333 226 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 PPP1R2P9O14990 202 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 HMGB3O15347 200 aaKnown RBP8.6□□□□□ -1.03
CD44-210ENST00000434472 HIST1H2BKO60814 126 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 GYPAP02724 150 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 HIST1H2BJP06899 126 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 FABP1P07148 127 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 PFN1P07737 140 aaKnown RBP8.6□□□□□ -1.03
CD44-210ENST00000434472 HIST1H2BOP23527 126 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 CD40P25942 277 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 HIST1H2BBP33778 126 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 SRP14P37108 136 aaKnown RBP8.6□□□□□ -1.03
CD44-210ENST00000434472 HIST1H2BDP58876 126 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 HIST1H2BCP62807 126 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 RAB31Q13636 194 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 HNF4GQ14541 408 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 HIST2H2BEQ16778 126 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 SPRNQ5BIV9 151 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.6□□□□□ -1.03
CD44-210ENST00000434472 TEX36Q5VZQ5 186 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 TREML4Q6UXN2 200 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 ZNF788Q6ZQV5 615 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 Q8N7P7 452 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 RBMXL3Q8N7X1 1067 aaKnown RBP8.6□□□□□ -1.03
CD44-210ENST00000434472 ZNF439Q8NDP4 499 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 HIST1H2BHQ93079 126 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 PLPPR2Q96GM1 343 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 HIST1H2BNQ99877 126 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 HIST1H2BMQ99879 126 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 GCM1Q9NP62 436 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 ELOVL5Q9NYP7 299 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 PRNDQ9UKY0 176 aa8.6□□□□□ -1.03
CD44-210ENST00000434472 CFAP54Q96N23 3096 aa8.59□□□□□ -1.03
CD44-210ENST00000434472 hADV38S2A0JD32 116 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms