RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 SYT1P21579 422 aa0.52□□□□□ -2.33
LINC01239-201ENST00000433645 CCR2P41597 374 aa0.52□□□□□ -2.33
LINC01239-201ENST00000433645 GNA13Q14344 377 aa0.52□□□□□ -2.33
LINC01239-201ENST00000433645 CDK5R1Q15078 307 aa0.52□□□□□ -2.33
LINC01239-201ENST00000433645 MOGQ16653 247 aa0.52□□□□□ -2.33
LINC01239-201ENST00000433645 LRRC75BQ2VPJ9 315 aa0.52□□□□□ -2.33
LINC01239-201ENST00000433645 ARHGAP11BQ3KRB8 267 aa0.52□□□□□ -2.33
LINC01239-201ENST00000433645 ACSM3Q53FZ2 586 aa0.52□□□□□ -2.33
LINC01239-201ENST00000433645 ZNF705AQ6ZN79 300 aaPredicted RBP0.52□□□□□ -2.33
LINC01239-201ENST00000433645 TMEM86AQ8N2M4 240 aa0.52□□□□□ -2.33
LINC01239-201ENST00000433645 PPCDCQ96CD2 204 aa0.52□□□□□ -2.33
LINC01239-201ENST00000433645 LRRC45Q96CN5 670 aa0.52□□□□□ -2.33
LINC01239-201ENST00000433645 ODF3Q96PU9 254 aa0.52□□□□□ -2.33
LINC01239-201ENST00000433645 MROQ9BYG7 248 aa0.52□□□□□ -2.33
LINC01239-201ENST00000433645 CHST6Q9GZX3 395 aa0.52□□□□□ -2.33
LINC01239-201ENST00000433645 CHMP5Q9NZZ3 219 aa0.52□□□□□ -2.33
LINC01239-201ENST00000433645 A0A0D9SEW6 157 aa0.51□□□□□ -2.33
LINC01239-201ENST00000433645 TMEM213A2RRL7 107 aa0.51□□□□□ -2.33
LINC01239-201ENST00000433645 OR51F1A6NGY5 319 aa0.51□□□□□ -2.33
LINC01239-201ENST00000433645 F8VZ95 297 aa0.51□□□□□ -2.33
LINC01239-201ENST00000433645 CCRL2O00421 344 aa0.51□□□□□ -2.33
LINC01239-201ENST00000433645 YKT6O15498 198 aa0.51□□□□□ -2.33
LINC01239-201ENST00000433645 ATP8B1O43520 1251 aa0.51□□□□□ -2.33
LINC01239-201ENST00000433645 SCN2BO60939 215 aa0.51□□□□□ -2.33
LINC01239-201ENST00000433645 TPM1P09493 284 aa0.51□□□□□ -2.33
LINC01239-201ENST00000433645 AQP4P55087 323 aa0.51□□□□□ -2.33
LINC01239-201ENST00000433645 RPS24P62847 133 aaKnown RBP0.51□□□□□ -2.33
LINC01239-201ENST00000433645 HPCAP84074 193 aa0.51□□□□□ -2.33
LINC01239-201ENST00000433645 ZNHIT3Q15649 155 aaPredicted RBP0.51□□□□□ -2.33
LINC01239-201ENST00000433645 GPHB5Q86YW7 130 aa0.51□□□□□ -2.33
LINC01239-201ENST00000433645 CRLF3Q8IUI8 442 aa0.51□□□□□ -2.33
LINC01239-201ENST00000433645 C12orf43Q96C57 262 aaKnown RBP0.51□□□□□ -2.33
LINC01239-201ENST00000433645 NMNAT3Q96T66 252 aa0.51□□□□□ -2.33
LINC01239-201ENST00000433645 MED10Q9BTT4 135 aa0.51□□□□□ -2.33
LINC01239-201ENST00000433645 TTTY13Q9BZ97 58 aa0.51□□□□□ -2.33
LINC01239-201ENST00000433645 TP53TG1Q9Y2A0 90 aa0.51□□□□□ -2.33
LINC01239-201ENST00000433645 HDGFL3Q9Y3E1 203 aa0.51□□□□□ -2.33
LINC01239-201ENST00000433645 RBM7Q9Y580 266 aaKnown RBP0.51□□□□□ -2.33
LINC01239-201ENST00000433645 MED12LQ86YW9 2145 aa0.5□□□□□ -2.33
LINC01239-201ENST00000433645 LAMB4A4D0S4 1761 aa0.5□□□□□ -2.33
LINC01239-201ENST00000433645 C5orf49A4QMS7 147 aa0.5□□□□□ -2.33
LINC01239-201ENST00000433645 MEIS3P1A6NDR6 274 aa0.5□□□□□ -2.33
LINC01239-201ENST00000433645 TOX3O15405 576 aaPredicted RBP0.5□□□□□ -2.33
LINC01239-201ENST00000433645 HCRTO43612 131 aa0.5□□□□□ -2.33
LINC01239-201ENST00000433645 ETV1P50549 477 aa0.5□□□□□ -2.33
LINC01239-201ENST00000433645 RAB14P61106 215 aa0.5□□□□□ -2.33
LINC01239-201ENST00000433645 SMAGPQ0VAQ4 97 aa0.5□□□□□ -2.33
LINC01239-201ENST00000433645 C4orf26Q17RF5 130 aa0.5□□□□□ -2.33
LINC01239-201ENST00000433645 HLA-DRB5Q30154 266 aa0.5□□□□□ -2.33
LINC01239-201ENST00000433645 SPATA24Q86W54 205 aa0.5□□□□□ -2.33
LINC01239-201ENST00000433645 RPP25LQ8N5L8 163 aaKnown RBP0.5□□□□□ -2.33
LINC01239-201ENST00000433645 SPERTQ8NA61 448 aa0.5□□□□□ -2.33
LINC01239-201ENST00000433645 IMMP2LQ96T52 175 aa0.5□□□□□ -2.33
LINC01239-201ENST00000433645 HES4Q9HCC6 221 aa0.5□□□□□ -2.33
LINC01239-201ENST00000433645 ALPK2Q86TB3 2170 aa0.49□□□□□ -2.33
LINC01239-201ENST00000433645 FLT4P35916 1363 aa0.49□□□□□ -2.33
LINC01239-201ENST00000433645 TRAV38-1A0A0B4J264 116 aa0.49□□□□□ -2.33
LINC01239-201ENST00000433645 FTCDNL1E5RQL4 147 aa0.49□□□□□ -2.33
LINC01239-201ENST00000433645 K7ERQ8 282 aa0.49□□□□□ -2.33
LINC01239-201ENST00000433645 APOMO95445 188 aa0.49□□□□□ -2.33
LINC01239-201ENST00000433645 NPPAP01160 153 aa0.49□□□□□ -2.33
LINC01239-201ENST00000433645 ORM1P02763 201 aa0.49□□□□□ -2.33
LINC01239-201ENST00000433645 RPL28P46779 137 aaKnown RBP0.49□□□□□ -2.33
LINC01239-201ENST00000433645 C9orf64Q5T6V5 341 aa0.49□□□□□ -2.33
LINC01239-201ENST00000433645 C9orf163Q8N9P6 203 aa0.49□□□□□ -2.33
LINC01239-201ENST00000433645 ZNF514Q96K75 400 aaPredicted RBP0.49□□□□□ -2.33
LINC01239-201ENST00000433645 SLC22A4Q9H015 551 aa0.49□□□□□ -2.33
LINC01239-201ENST00000433645 ZNHIT6Q9NWK9 470 aaKnown RBP0.49□□□□□ -2.33
LINC01239-201ENST00000433645 STRCQ7RTU9 1775 aa0.48□□□□□ -2.33
LINC01239-201ENST00000433645 IGKV1-9A0A0C4DH69 117 aa0.48□□□□□ -2.33
LINC01239-201ENST00000433645 AZIN1O14977 448 aa0.48□□□□□ -2.33
LINC01239-201ENST00000433645 MSMBP08118 114 aa0.48□□□□□ -2.33
LINC01239-201ENST00000433645 DDTP30046 118 aa0.48□□□□□ -2.33
LINC01239-201ENST00000433645 HLA-DRB3P79483 266 aa0.48□□□□□ -2.33
LINC01239-201ENST00000433645 EMX1Q04741 257 aaPredicted RBP0.48□□□□□ -2.33
LINC01239-201ENST00000433645 SURF2Q15527 256 aaPredicted RBP0.48□□□□□ -2.33
LINC01239-201ENST00000433645 DNAL1Q4LDG9 190 aa0.48□□□□□ -2.33
LINC01239-201ENST00000433645 CCL13Q99616 98 aa0.48□□□□□ -2.33
LINC01239-201ENST00000433645 SPANXB1Q9NS25 103 aaPredicted RBP0.48□□□□□ -2.33
LINC01239-201ENST00000433645 C22orf24Q9Y442 160 aa0.48□□□□□ -2.33
LINC01239-201ENST00000433645 GLI3P10071 1580 aa0.48□□□□□ -2.33
LINC01239-201ENST00000433645 EIF4G1Q04637 1599 aaKnown RBP0.48□□□□□ -2.33
LINC01239-201ENST00000433645 H3BT86 120 aa0.47□□□□□ -2.33
LINC01239-201ENST00000433645 ORC5O43913 435 aa0.47□□□□□ -2.33
LINC01239-201ENST00000433645 IL6P05231 212 aa0.47□□□□□ -2.33
LINC01239-201ENST00000433645 CCL5P13501 91 aa0.47□□□□□ -2.33
LINC01239-201ENST00000433645 CXCL2P19875 107 aa0.47□□□□□ -2.33
LINC01239-201ENST00000433645 CD40LGP29965 261 aa0.47□□□□□ -2.33
LINC01239-201ENST00000433645 SLCO1A2P46721 670 aa0.47□□□□□ -2.33
LINC01239-201ENST00000433645 CDK9P50750 372 aaKnown RBP0.47□□□□□ -2.33
LINC01239-201ENST00000433645 HADHBP55084 474 aaKnown RBP0.47□□□□□ -2.33
LINC01239-201ENST00000433645 FAM173BQ6P4H8 233 aa0.47□□□□□ -2.33
LINC01239-201ENST00000433645 DNM1P34Q6PK57 102 aa0.47□□□□□ -2.33
LINC01239-201ENST00000433645 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.47□□□□□ -2.33
LINC01239-201ENST00000433645 GID4Q8IVV7 300 aa0.47□□□□□ -2.33
LINC01239-201ENST00000433645 UMODL1-AS1Q8N2C9 162 aa0.47□□□□□ -2.33
LINC01239-201ENST00000433645 C15orf53Q8NAA6 179 aa0.47□□□□□ -2.33
LINC01239-201ENST00000433645 SLC37A2Q8TED4 501 aa0.47□□□□□ -2.33
LINC01239-201ENST00000433645 ASB13Q8WXK3 278 aa0.47□□□□□ -2.33
LINC01239-201ENST00000433645 ANKRD36BP1Q96IX9 119 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms