RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 RELBQ01201 579 aa12.05□□□□□ -0.48
RFTN1-203ENST00000432519 ZNF439Q8NDP4 499 aa12.05□□□□□ -0.48
RFTN1-203ENST00000432519 TMEM170AQ8WVE7 144 aa12.05□□□□□ -0.48
RFTN1-203ENST00000432519 TRGV10A0A0A0MS01 117 aa12.05□□□□□ -0.48
RFTN1-203ENST00000432519 RRHO14718 337 aa12.05□□□□□ -0.48
RFTN1-203ENST00000432519 NDUFB7P17568 137 aa12.05□□□□□ -0.48
RFTN1-203ENST00000432519 Q8N7P7 452 aa12.05□□□□□ -0.48
RFTN1-203ENST00000432519 OR10P1Q8NGE3 313 aa12.05□□□□□ -0.48
RFTN1-203ENST00000432519 S1PR3Q99500 378 aa12.05□□□□□ -0.48
RFTN1-203ENST00000432519 TMEM140Q9NV12 185 aa12.05□□□□□ -0.48
RFTN1-203ENST00000432519 TRAV1-1A0A0B4J248 108 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 LOC102723971A0A1B0GUV8 181 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 OR8U8P0C7N1 319 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 CCL3L1P16619 93 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 FGF7P21781 194 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 TNFSF4P23510 183 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 TEX36Q5VZQ5 186 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 DPPA3Q6W0C5 159 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 ABHD12Q8N2K0 398 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 FAM24BQ8N5W8 94 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 MBD3L1Q8WWY6 194 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 CCL17Q92583 94 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 SLC25A22Q9H936 323 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 LAMP3Q9UQV4 416 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 hCG_1809904A0A1W2PP81 198 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 A0A1W2PR64 198 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 A0A1W2PRV1 198 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 SERF2P84101 59 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 TMEM41BQ5BJD5 291 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 GCSAMLQ5JQS6 135 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 LYPD2Q6UXB3 125 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 DMRTC2Q8IXT2 367 aaPredicted RBP12.04□□□□□ -0.48
RFTN1-203ENST00000432519 GATAD1Q8WUU5 269 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 ZCCHC14Q8WYQ9 949 aaKnown RBP12.04□□□□□ -0.48
RFTN1-203ENST00000432519 RAB39BQ96DA2 213 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 IGKV1-16P04430 117 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 GRNP28799 593 aaKnown RBP12.04□□□□□ -0.48
RFTN1-203ENST00000432519 TMEM147Q9BVK8 224 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 NPCDR1Q9BY65 106 aa12.04□□□□□ -0.48
RFTN1-203ENST00000432519 MAP1LC3B2A6NCE7 125 aa12.03□□□□□ -0.48
RFTN1-203ENST00000432519 SHISA9B4DS77 424 aa12.03□□□□□ -0.48
RFTN1-203ENST00000432519 HBE1P02100 147 aa12.03□□□□□ -0.48
RFTN1-203ENST00000432519 HSPB1P04792 205 aaKnown RBP12.03□□□□□ -0.48
RFTN1-203ENST00000432519 MRPS11P82912 194 aaKnown RBP12.03□□□□□ -0.48
RFTN1-203ENST00000432519 FLI1Q01543 452 aaPredicted RBP12.03□□□□□ -0.48
RFTN1-203ENST00000432519 AVPI1Q5T686 147 aa12.03□□□□□ -0.48
RFTN1-203ENST00000432519 ZNF429Q86V71 674 aa12.03□□□□□ -0.48
RFTN1-203ENST00000432519 PARD6GQ9BYG4 376 aaPredicted RBP12.03□□□□□ -0.48
RFTN1-203ENST00000432519 MAP1LC3BQ9GZQ8 125 aa12.03□□□□□ -0.48
RFTN1-203ENST00000432519 SAP30LQ9HAJ7 183 aa12.03□□□□□ -0.48
RFTN1-203ENST00000432519 E7EQL1 145 aa12.03□□□□□ -0.48
RFTN1-203ENST00000432519 PLAUP00749 431 aa12.03□□□□□ -0.48
RFTN1-203ENST00000432519 IRF2P14316 349 aa12.03□□□□□ -0.48
RFTN1-203ENST00000432519 NQO2P16083 231 aa12.03□□□□□ -0.48
RFTN1-203ENST00000432519 MDKP21741 143 aaPredicted RBP12.03□□□□□ -0.48
RFTN1-203ENST00000432519 RAB11AP62491 216 aa12.03□□□□□ -0.48
RFTN1-203ENST00000432519 HABP2Q14520 560 aaPredicted RBP12.03□□□□□ -0.48
RFTN1-203ENST00000432519 AARDQ4LEZ3 155 aa12.03□□□□□ -0.48
RFTN1-203ENST00000432519 FAM90A2PQ658T7 463 aa12.03□□□□□ -0.48
RFTN1-203ENST00000432519 OR4A16Q8NH70 328 aa12.03□□□□□ -0.48
RFTN1-203ENST00000432519 RHOVQ96L33 236 aa12.03□□□□□ -0.48
RFTN1-203ENST00000432519 IDI2-AS1Q9NZ38 188 aa12.03□□□□□ -0.48
RFTN1-203ENST00000432519 RAXQ9Y2V3 346 aa12.03□□□□□ -0.48
RFTN1-203ENST00000432519 BCL2P10415 239 aa12.02□□□□□ -0.49
RFTN1-203ENST00000432519 VDAC2P45880 294 aaPredicted RBP12.02□□□□□ -0.49
RFTN1-203ENST00000432519 CENPVQ7Z7K6 275 aaPredicted RBP12.02□□□□□ -0.49
RFTN1-203ENST00000432519 CA5BP1Q8WTZ4 195 aa12.02□□□□□ -0.49
RFTN1-203ENST00000432519 RND1Q92730 232 aa12.02□□□□□ -0.49
RFTN1-203ENST00000432519 EGLN1Q9GZT9 426 aa12.02□□□□□ -0.49
RFTN1-203ENST00000432519 SMDT1Q9H4I9 107 aa12.02□□□□□ -0.49
RFTN1-203ENST00000432519 PRELID3BQ9Y3B1 194 aa12.02□□□□□ -0.49
RFTN1-203ENST00000432519 PLXNB1O43157 2135 aa12.02□□□□□ -0.49
RFTN1-203ENST00000432519 TRGV8A0A0C4DH27 118 aa12.02□□□□□ -0.49
RFTN1-203ENST00000432519 SRRM4A7MD48 611 aaKnown RBP12.02□□□□□ -0.49
RFTN1-203ENST00000432519 GFRA3O60609 400 aa12.02□□□□□ -0.49
RFTN1-203ENST00000432519 CDSNQ15517 529 aa12.02□□□□□ -0.49
RFTN1-203ENST00000432519 KHDC3LQ587J8 217 aa12.02□□□□□ -0.49
RFTN1-203ENST00000432519 OR4A47Q6IF82 309 aa12.02□□□□□ -0.49
RFTN1-203ENST00000432519 C15orf54Q8N8G6 183 aa12.02□□□□□ -0.49
RFTN1-203ENST00000432519 SLC25A10Q9UBX3 287 aaPredicted RBP12.02□□□□□ -0.49
RFTN1-203ENST00000432519 RPUSD1Q9UJJ7 312 aaKnown RBP12.02□□□□□ -0.49
RFTN1-203ENST00000432519 ITPR1Q14643 2758 aa12.01□□□□□ -0.49
RFTN1-203ENST00000432519 RBFOX2O43251 390 aaKnown RBP eCLIP12.01□□□□□ -0.49
RFTN1-203ENST00000432519 IFNA10P01566 189 aa12.01□□□□□ -0.49
RFTN1-203ENST00000432519 OPN1MWP04001 364 aa12.01□□□□□ -0.49
RFTN1-203ENST00000432519 CT45A6P0DMU7 189 aa12.01□□□□□ -0.49
RFTN1-203ENST00000432519 CT45A5P0DMU8 189 aa12.01□□□□□ -0.49
RFTN1-203ENST00000432519 CT45A7P0DMV0 189 aa12.01□□□□□ -0.49
RFTN1-203ENST00000432519 OPN1MW2P0DN77 364 aa12.01□□□□□ -0.49
RFTN1-203ENST00000432519 OPN1MW3P0DN78 364 aa12.01□□□□□ -0.49
RFTN1-203ENST00000432519 TNFRSF1AP19438 455 aa12.01□□□□□ -0.49
RFTN1-203ENST00000432519 RAB13P51153 203 aa12.01□□□□□ -0.49
RFTN1-203ENST00000432519 GNB2P62879 340 aa12.01□□□□□ -0.49
RFTN1-203ENST00000432519 DLK1P80370 383 aa12.01□□□□□ -0.49
RFTN1-203ENST00000432519 VWC2Q2TAL6 325 aa12.01□□□□□ -0.49
RFTN1-203ENST00000432519 FFAR4Q5NUL3 377 aa12.01□□□□□ -0.49
RFTN1-203ENST00000432519 ZNF343Q6P1L6 599 aa12.01□□□□□ -0.49
RFTN1-203ENST00000432519 LHX4Q969G2 390 aa12.01□□□□□ -0.49
RFTN1-203ENST00000432519 PINX1Q96BK5 328 aaKnown RBP12.01□□□□□ -0.49
RFTN1-203ENST00000432519 CIB3Q96Q77 187 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms