RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 IGHV1OR15-1A0A075B7D0 117 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 A0A096LPI6 279 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 IGHV3-35A0A0C4DH35 117 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 KANTRA0A1W2PQU2 76 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 GGT3PA6NGU5 568 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 SUPT3HB4E1H0 165 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 TRAPPC2LH3BP13 241 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 SAP18O00422 153 aaKnown RBP3.09□□□□□ -1.91
HMGB3-203ENST00000430118 FAAHO00519 579 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 HSD17B6O14756 317 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 PHOX2AO14813 284 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 CCL25O15444 150 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 SOX15O60248 233 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 CREBL2O60519 120 aaPredicted RBP3.09□□□□□ -1.91
HMGB3-203ENST00000430118 ZNF253O75346 499 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 MMP23AO75900 390 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 YIF1AO95070 293 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 VENTXO95231 258 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 ACTL6AO96019 429 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 CST4P01036 141 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 PDYNP01213 254 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 APOC2P02655 101 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 SERPIND1P05546 499 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 CD5P06127 495 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 OR10J4P0C629 311 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 SLC25A4P12235 298 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 IGLL1P15814 213 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 SHC1P29353 583 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 CMPK1P30085 196 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 NTSP30990 170 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 IDH2P48735 452 aaKnown RBP3.09□□□□□ -1.91
HMGB3-203ENST00000430118 RAB7AP51149 207 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 SSR4P51571 173 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 CAV2P51636 162 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 MXD1Q05195 221 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 C1DQ13901 141 aaKnown RBP3.09□□□□□ -1.91
HMGB3-203ENST00000430118 FAM53BQ14153 422 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 PAFAH1B3Q15102 231 aaKnown RBP3.09□□□□□ -1.91
HMGB3-203ENST00000430118 TSNQ15631 228 aaKnown RBP3.09□□□□□ -1.91
HMGB3-203ENST00000430118 REEP3Q6NUK4 255 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 ZNF343Q6P1L6 599 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 DNM1P34Q6PK57 102 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 TMEM91Q6ZNR0 172 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 OR2W3Q7Z3T1 314 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 TMEM144Q7Z5S9 345 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 VTCN1Q7Z7D3 282 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 TMED4Q7Z7H5 227 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 TMEM183AQ8IXX5 376 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 GABRG1Q8N1C3 465 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 LYG1Q8N1E2 194 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 POM121L12Q8N7R1 296 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 OR4K2Q8NGD2 314 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 OR4A4PQ8NGN8 299 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 OR5AR1Q8NGP9 310 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 CASTOR1Q8WTX7 329 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 CPNE2Q96FN4 548 aaPredicted RBP3.09□□□□□ -1.91
HMGB3-203ENST00000430118 IMP4Q96G21 291 aaKnown RBP3.09□□□□□ -1.91
HMGB3-203ENST00000430118 SLC35E1Q96K37 410 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 ZFP3Q96NJ6 502 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 OR4K3Q96R72 315 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 TRIB3Q96RU7 358 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 TP53RKQ96S44 253 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 PEBP4Q96S96 227 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 HIST1H2BLQ99880 126 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 KLHDC3Q9BQ90 382 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 MRPL57Q9BQC6 102 aaKnown RBP3.09□□□□□ -1.91
HMGB3-203ENST00000430118 C20orf24Q9BUV8 137 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 PBDC1Q9BVG4 233 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 MS4A8Q9BY19 250 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 DEFB126Q9BYW3 111 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 TTTY12Q9BZ98 90 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 CHIAQ9BZP6 476 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 DEFB127Q9H1M4 99 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 SMDT1Q9H4I9 107 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 RNF167Q9H6Y7 350 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 ZDHHC11Q9H8X9 412 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 PLEKHA1Q9HB21 404 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 RHOFQ9HBH0 211 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 TAS2R5Q9NYW4 299 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 CCDC167Q9P0B6 97 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 MRPL27Q9P0M9 148 aaKnown RBP3.09□□□□□ -1.91
HMGB3-203ENST00000430118 DHRS4-AS1Q9P1J3 65 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 CACFD1Q9UGQ2 172 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 VAX2Q9UIW0 290 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 BOKQ9UMX3 212 aaPredicted RBP3.09□□□□□ -1.91
HMGB3-203ENST00000430118 ST3GAL6Q9Y274 331 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 FAM215AQ9Y5M1 114 aa3.09□□□□□ -1.91
HMGB3-203ENST00000430118 INTS1Q8N201 2190 aaKnown RBP3.09□□□□□ -1.91
HMGB3-203ENST00000430118 DOCK10Q96BY6 2186 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 CNTRLQ7Z7A1 2325 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 TRGV5A0A0B4J1U4 118 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 A0A1W2PPV4 95 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 IRGMA1A4Y4 181 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 OR5H14A6NHG9 310 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 FAM166BA8MTA8 275 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 OR11H12B2RN74 326 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 F5H5P2 479 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 TNFRSF11BO00300 401 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 DCTN6O00399 190 aa3.08□□□□□ -1.92
HMGB3-203ENST00000430118 CXCR6O00574 342 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms