RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 LHX2P50458 406 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 ZFP36L1Q07352 338 aaKnown RBP6.81□□□□□ -1.32
HPS4-205ENST00000429411 ELOBQ15370 118 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 TMEM241Q24JQ0 296 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 BSXQ3C1V8 233 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 NMSQ5H8A3 153 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 HEPN1Q6WQI6 88 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 C16orf82Q7Z2V1 217 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 OR2Z1Q8NG97 314 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 OR4A16Q8NH70 328 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 SSMEM1Q8WWF3 244 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 MALSU1Q96EH3 234 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 GAL3ST2Q9H3Q3 398 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 FUT9Q9Y231 359 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 COL4A2P08572 1712 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 TRAV38-1A0A0B4J264 116 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 M0R1X1 148 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 ACTL6BO94805 426 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 CYB5R3P00387 301 aaPredicted RBP6.81□□□□□ -1.32
HPS4-205ENST00000429411 HSPB1P04792 205 aaKnown RBP6.81□□□□□ -1.32
HPS4-205ENST00000429411 ZNF883P0CG24 379 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 GPR12P47775 334 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 CLDN18P56856 261 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 SOX8P57073 446 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 GAMTQ14353 236 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 BATFQ16520 125 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 ZNF766Q5HY98 468 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 FBXW9Q5XUX1 488 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 FOXL2NBQ6ZUU3 175 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 DAZAP1Q96EP5 407 aaKnown RBP6.81□□□□□ -1.32
HPS4-205ENST00000429411 POM121L2Q96KW2 1035 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 OR51I2Q9H344 312 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 VAX2Q9UIW0 290 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 MTORP42345 2549 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 TMEM30CPA0ZSE6 113 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 C10orf142B7Z368 130 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 DVL1O14640 695 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 HIST1H2BKO60814 126 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 NAPSAO96009 420 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 HIST1H2BJP06899 126 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 FOLR2P14207 255 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 HIST1H2BOP23527 126 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 ACP1P24666 158 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 HIST1H2BBP33778 126 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 GLIPR1P48060 266 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 GFRA1P56159 465 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 HIST1H2BDP58876 126 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 ERVK-16P61578 105 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 HIST1H2BCP62807 126 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 HIST2H2BEQ16778 126 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.8□□□□□ -1.32
HPS4-205ENST00000429411 RNF138Q8WVD3 245 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 TAF15Q92804 592 aaKnown RBP eCLIP6.8□□□□□ -1.32
HPS4-205ENST00000429411 HIST1H2BHQ93079 126 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 NUDT11Q96G61 164 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 HIST1H2BNQ99877 126 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 HIST1H2BMQ99879 126 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 C2orf88Q9BSF0 95 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 PCGF1Q9BSM1 259 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 ENY2Q9NPA8 101 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 IL36GQ9NZH8 169 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 BAHCC1Q9P281 2608 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 LOC102723971A0A1B0GUV8 181 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 C9orf172C9J069 976 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 SP1P08047 785 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 COX5AP20674 150 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 CEACAM3P40198 252 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 TFF3Q07654 80 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 PYY3Q5JQD4 70 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 FAM78BQ5VT40 261 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 PEAR1Q5VY43 1037 aaPredicted RBP6.8□□□□□ -1.32
HPS4-205ENST00000429411 REC114Q7Z4M0 266 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 H1FOOQ8IZA3 346 aaPredicted RBP6.8□□□□□ -1.32
HPS4-205ENST00000429411 ACTR3CQ9C0K3 210 aaPredicted RBP6.8□□□□□ -1.32
HPS4-205ENST00000429411 WNK2Q9Y3S1 2297 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 MYO9AB2RTY4 2548 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 INTS1Q8N201 2190 aaKnown RBP6.8□□□□□ -1.32
HPS4-205ENST00000429411 SEC14L6B5MCN3 397 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 FAM157AC9JC47 383 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 NTN3O00634 580 aaPredicted RBP6.8□□□□□ -1.32
HPS4-205ENST00000429411 AQP7O14520 342 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 IGKV1-5P01602 117 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 HBZP02008 142 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 PF4P02776 101 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 CDX1P47902 265 aaPredicted RBP6.8□□□□□ -1.32
HPS4-205ENST00000429411 RNPS1Q15287 305 aaKnown RBP6.8□□□□□ -1.32
HPS4-205ENST00000429411 TMEM41BQ5BJD5 291 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 ZNF506Q5JVG8 444 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 C14orf144Q96I85 54 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 ELOVL1Q9BW60 279 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.8□□□□□ -1.32
HPS4-205ENST00000429411 TP53TG5Q9Y2B4 290 aa6.8□□□□□ -1.32
HPS4-205ENST00000429411 HELTA6NFD8 242 aa6.79□□□□□ -1.32
HPS4-205ENST00000429411 C17orf98A8MV24 154 aa6.79□□□□□ -1.32
HPS4-205ENST00000429411 SPINT2O43291 252 aa6.79□□□□□ -1.32
HPS4-205ENST00000429411 SPRY3O43610 288 aa6.79□□□□□ -1.32
HPS4-205ENST00000429411 SOD3P08294 240 aa6.79□□□□□ -1.32
HPS4-205ENST00000429411 PAX9P55771 341 aa6.79□□□□□ -1.32
HPS4-205ENST00000429411 MEF2BQ02080 365 aaPredicted RBP6.79□□□□□ -1.32
HPS4-205ENST00000429411 GCSAMLQ5JQS6 135 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms