RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 ZNF808Q8N4W9 903 aaPredicted RBP12.3□□□□□ -0.44
SYNGAP1-203ENST00000428982 RER1O15258 196 aa12.29□□□□□ -0.44
SYNGAP1-203ENST00000428982 CA1P00915 261 aaPredicted RBP12.29□□□□□ -0.44
SYNGAP1-203ENST00000428982 SLC25A47Q6Q0C1 308 aa12.29□□□□□ -0.44
SYNGAP1-203ENST00000428982 GNB4Q9HAV0 340 aa12.29□□□□□ -0.44
SYNGAP1-203ENST00000428982 A0A1W2PP11 408 aa12.29□□□□□ -0.44
SYNGAP1-203ENST00000428982 C21orf140B9A014 251 aa12.29□□□□□ -0.44
SYNGAP1-203ENST00000428982 TAX1BP3O14907 124 aa12.29□□□□□ -0.44
SYNGAP1-203ENST00000428982 ZNF17P17021 662 aa12.29□□□□□ -0.44
SYNGAP1-203ENST00000428982 FOXL1Q12952 345 aa12.29□□□□□ -0.44
SYNGAP1-203ENST00000428982 PRSS57Q6UWY2 283 aa12.29□□□□□ -0.44
SYNGAP1-203ENST00000428982 LHFPL1Q86WI0 220 aa12.29□□□□□ -0.44
SYNGAP1-203ENST00000428982 QTRT1Q9BXR0 403 aaKnown RBP12.29□□□□□ -0.44
SYNGAP1-203ENST00000428982 RIF1Q5UIP0 2472 aaKnown RBP12.29□□□□□ -0.44
SYNGAP1-203ENST00000428982 CA2P00918 260 aa12.29□□□□□ -0.44
SYNGAP1-203ENST00000428982 CDAP32320 146 aa12.29□□□□□ -0.44
SYNGAP1-203ENST00000428982 CFHR1Q03591 330 aa12.29□□□□□ -0.44
SYNGAP1-203ENST00000428982 OR2T6Q8NHC8 308 aa12.29□□□□□ -0.44
SYNGAP1-203ENST00000428982 MRPL27Q9P0M9 148 aaKnown RBP12.29□□□□□ -0.44
SYNGAP1-203ENST00000428982 TRBV9A0A0B4J1U6 114 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 FAM231BA6NCW3 169 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 GAGE12HA6NDE8 117 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 EGR1P18146 543 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 CA7P43166 264 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 OR8B3Q8NGG8 313 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 KIR2DS1A0A191URI9 304 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 KIR2DS4P43632 304 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 CCL11P51671 97 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 KIR2DS1Q14954 304 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 CEACAM21Q3KPI0 293 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 MRPL54Q6P161 138 aaKnown RBP12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 TMEM178AQ8NBL3 297 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 PERPQ96FX8 193 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 NAA38Q9BRA0 125 aaKnown RBP12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 ANAPC13Q9BS18 74 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 OR2D2Q9H210 308 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 KLRC4-KLRK1H3BQV0 150 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 CLPSP04118 112 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 GPR183P32249 361 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 SRYQ05066 204 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 CD300EQ496F6 205 aaPredicted RBP12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 BRICD5Q6PL45 260 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 C16orf47Q6ZP98 133 aaPredicted RBP12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 DEFB125Q8N687 156 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 TMEM171Q8WVE6 324 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 MBD3L1Q8WWY6 194 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 TCL1AP56279 114 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 HERV-K104P63124 156 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 RNF166Q96A37 237 aaPredicted RBP12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 RTN4RQ9BZR6 473 aa12.28□□□□□ -0.44
SYNGAP1-203ENST00000428982 HS3ST1O14792 307 aa12.27□□□□□ -0.44
SYNGAP1-203ENST00000428982 APCSP02743 223 aa12.27□□□□□ -0.44
SYNGAP1-203ENST00000428982 OR8B8Q15620 311 aa12.27□□□□□ -0.44
SYNGAP1-203ENST00000428982 MKXQ8IYA7 352 aa12.27□□□□□ -0.44
SYNGAP1-203ENST00000428982 OSR2Q8N2R0 312 aa12.27□□□□□ -0.44
SYNGAP1-203ENST00000428982 TECTAO75443 2155 aa12.27□□□□□ -0.45
SYNGAP1-203ENST00000428982 PROB1E7EW31 1015 aa12.27□□□□□ -0.45
SYNGAP1-203ENST00000428982 SMIM17P0DL12 118 aa12.27□□□□□ -0.45
SYNGAP1-203ENST00000428982 GPR6P46095 362 aaPredicted RBP12.27□□□□□ -0.45
SYNGAP1-203ENST00000428982 SLC35B1P78383 322 aa12.27□□□□□ -0.45
SYNGAP1-203ENST00000428982 HIST1H1AQ02539 215 aaPredicted RBP12.27□□□□□ -0.45
SYNGAP1-203ENST00000428982 PLP2Q04941 152 aa12.27□□□□□ -0.45
SYNGAP1-203ENST00000428982 BOD1L2Q8IYS8 172 aa12.27□□□□□ -0.45
SYNGAP1-203ENST00000428982 OR2M3Q8NG83 312 aa12.27□□□□□ -0.45
SYNGAP1-203ENST00000428982 TMEM70Q9BUB7 260 aa12.27□□□□□ -0.45
SYNGAP1-203ENST00000428982 GCM1Q9NP62 436 aa12.27□□□□□ -0.45
SYNGAP1-203ENST00000428982 RANBP2P49792 3224 aaKnown RBP12.27□□□□□ -0.45
SYNGAP1-203ENST00000428982 CEACAM18A8MTB9 384 aa12.27□□□□□ -0.45
SYNGAP1-203ENST00000428982 MPPED1O15442 326 aa12.27□□□□□ -0.45
SYNGAP1-203ENST00000428982 VDAC1P21796 283 aa12.27□□□□□ -0.45
SYNGAP1-203ENST00000428982 AAED1Q7RTV5 226 aa12.27□□□□□ -0.45
SYNGAP1-203ENST00000428982 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.27□□□□□ -0.45
SYNGAP1-203ENST00000428982 SLC25A40Q8TBP6 338 aa12.27□□□□□ -0.45
SYNGAP1-203ENST00000428982 ERRFI1Q9UJM3 462 aaPredicted RBP12.27□□□□□ -0.45
SYNGAP1-203ENST00000428982 HSPB8Q9UJY1 196 aa12.27□□□□□ -0.45
SYNGAP1-203ENST00000428982 MUC22E2RYF6 1773 aaPredicted RBP12.26□□□□□ -0.45
SYNGAP1-203ENST00000428982 OR7C1O76099 320 aaPredicted RBP12.26□□□□□ -0.45
SYNGAP1-203ENST00000428982 C1QTNF9P0C862 333 aa12.26□□□□□ -0.45
SYNGAP1-203ENST00000428982 NPY1RP25929 384 aa12.26□□□□□ -0.45
SYNGAP1-203ENST00000428982 TMEM50BP56557 158 aa12.26□□□□□ -0.45
SYNGAP1-203ENST00000428982 SEC11AP67812 179 aa12.26□□□□□ -0.45
SYNGAP1-203ENST00000428982 OR10G3Q8NGC4 313 aa12.26□□□□□ -0.45
SYNGAP1-203ENST00000428982 PIGCQ92535 297 aa12.26□□□□□ -0.45
SYNGAP1-203ENST00000428982 LHFPL6Q9Y693 200 aa12.26□□□□□ -0.45
SYNGAP1-203ENST00000428982 IGLC1P0CG04 106 aa12.26□□□□□ -0.45
SYNGAP1-203ENST00000428982 BVES-AS1Q5T3Y7 98 aa12.26□□□□□ -0.45
SYNGAP1-203ENST00000428982 OR5AS1Q8N127 324 aa12.26□□□□□ -0.45
SYNGAP1-203ENST00000428982 OR5D13Q8NGL4 314 aa12.26□□□□□ -0.45
SYNGAP1-203ENST00000428982 RPL15P61313 204 aaKnown RBP12.26□□□□□ -0.45
SYNGAP1-203ENST00000428982 SLC38A11Q08AI6 406 aa12.26□□□□□ -0.45
SYNGAP1-203ENST00000428982 BATF2Q8N1L9 274 aa12.26□□□□□ -0.45
SYNGAP1-203ENST00000428982 BLNKQ8WV28 456 aa12.26□□□□□ -0.45
SYNGAP1-203ENST00000428982 CHD7Q9P2D1 2997 aa12.26□□□□□ -0.45
SYNGAP1-203ENST00000428982 TRAV8-6A0A0B4J262 113 aa12.25□□□□□ -0.45
SYNGAP1-203ENST00000428982 DEGS1O15121 323 aa12.25□□□□□ -0.45
SYNGAP1-203ENST00000428982 SRSF10O75494 262 aaKnown RBP12.25□□□□□ -0.45
SYNGAP1-203ENST00000428982 FOXC1Q12948 553 aa12.25□□□□□ -0.45
SYNGAP1-203ENST00000428982 IL11P20809 199 aa12.25□□□□□ -0.45
SYNGAP1-203ENST00000428982 Q0VG73 95 aa12.25□□□□□ -0.45
SYNGAP1-203ENST00000428982 APOBEC3DQ96AK3 386 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms