RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 BEND2Q8NDZ0 799 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 OR4A16Q8NH70 328 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 RHOVQ96L33 236 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 MRPL20Q9BYC9 149 aaKnown RBP11.75□□□□□ -0.53
CDK3-201ENST00000425876 TMEM140Q9NV12 185 aa11.75□□□□□ -0.53
CDK3-201ENST00000425876 LOC105371242A0A075B767 164 aa11.74□□□□□ -0.53
CDK3-201ENST00000425876 IGHV2-26A0A0B4J1V2 119 aa11.74□□□□□ -0.53
CDK3-201ENST00000425876 A1L4Q6 167 aa11.74□□□□□ -0.53
CDK3-201ENST00000425876 C22orf46C9J442 243 aa11.74□□□□□ -0.53
CDK3-201ENST00000425876 M0R1W7 72 aa11.74□□□□□ -0.53
CDK3-201ENST00000425876 NDUFS7O75251 213 aa11.74□□□□□ -0.53
CDK3-201ENST00000425876 IGLV1-47P01700 117 aa11.74□□□□□ -0.53
CDK3-201ENST00000425876 IL6RP08887 468 aaPredicted RBP11.74□□□□□ -0.53
CDK3-201ENST00000425876 SEC11BP0C7V7 166 aa11.74□□□□□ -0.53
CDK3-201ENST00000425876 IAPPP10997 89 aa11.74□□□□□ -0.53
CDK3-201ENST00000425876 SPCS3P61009 180 aa11.74□□□□□ -0.53
CDK3-201ENST00000425876 RELBQ01201 579 aa11.74□□□□□ -0.53
CDK3-201ENST00000425876 COMMD7Q86VX2 200 aa11.74□□□□□ -0.53
CDK3-201ENST00000425876 OR1S2Q8NGQ3 325 aa11.74□□□□□ -0.53
CDK3-201ENST00000425876 OR5C1Q8NGR4 320 aa11.74□□□□□ -0.53
CDK3-201ENST00000425876 OSR1Q8TAX0 266 aaPredicted RBP11.74□□□□□ -0.53
CDK3-201ENST00000425876 NABP2Q9BQ15 211 aa11.74□□□□□ -0.53
CDK3-201ENST00000425876 CLEC7AQ9BXN2 247 aa11.74□□□□□ -0.53
CDK3-201ENST00000425876 H0YJW9 148 aa11.73□□□□□ -0.53
CDK3-201ENST00000425876 RBMXL2O75526 392 aaKnown RBP11.73□□□□□ -0.53
CDK3-201ENST00000425876 DFFBO76075 338 aa11.73□□□□□ -0.53
CDK3-201ENST00000425876 CST7O76096 145 aa11.73□□□□□ -0.53
CDK3-201ENST00000425876 FAM157CP0CG43 387 aa11.73□□□□□ -0.53
CDK3-201ENST00000425876 DYNLT3P51808 116 aa11.73□□□□□ -0.53
CDK3-201ENST00000425876 TMEM177Q53S58 311 aa11.73□□□□□ -0.53
CDK3-201ENST00000425876 TMEM14EPQ6UXP3 125 aa11.73□□□□□ -0.53
CDK3-201ENST00000425876 C1orf122Q6ZSJ8 110 aa11.73□□□□□ -0.53
CDK3-201ENST00000425876 OR13D1Q8NGV5 346 aa11.73□□□□□ -0.53
CDK3-201ENST00000425876 DTD1Q8TEA8 209 aa11.73□□□□□ -0.53
CDK3-201ENST00000425876 MARVELD3Q96A59 401 aa11.73□□□□□ -0.53
CDK3-201ENST00000425876 SAT2Q96F10 170 aaPredicted RBP11.73□□□□□ -0.53
CDK3-201ENST00000425876 FAM210AQ96ND0 272 aa11.73□□□□□ -0.53
CDK3-201ENST00000425876 PSMG3-AS1Q96PY0 264 aa11.73□□□□□ -0.53
CDK3-201ENST00000425876 PFDN2Q9UHV9 154 aa11.73□□□□□ -0.53
CDK3-201ENST00000425876 H3BP45 60 aa11.72□□□□□ -0.53
CDK3-201ENST00000425876 SCAF4O95104 1147 aaKnown RBP11.72□□□□□ -0.53
CDK3-201ENST00000425876 SPP1P10451 314 aa11.72□□□□□ -0.53
CDK3-201ENST00000425876 SULT1A2P50226 295 aa11.72□□□□□ -0.53
CDK3-201ENST00000425876 HBG1P69891 147 aa11.72□□□□□ -0.53
CDK3-201ENST00000425876 HBG2P69892 147 aa11.72□□□□□ -0.53
CDK3-201ENST00000425876 HLA-DRB5Q30154 266 aa11.72□□□□□ -0.53
CDK3-201ENST00000425876 OR4A47Q6IF82 309 aa11.72□□□□□ -0.53
CDK3-201ENST00000425876 SSX9Q7RTT3 188 aa11.72□□□□□ -0.53
CDK3-201ENST00000425876 PDPNQ86YL7 162 aa11.72□□□□□ -0.53
CDK3-201ENST00000425876 TGIF2LXQ8IUE1 241 aa11.72□□□□□ -0.53
CDK3-201ENST00000425876 KIR3DL3Q8N743 410 aa11.72□□□□□ -0.53
CDK3-201ENST00000425876 CXorf58Q96LI9 332 aa11.72□□□□□ -0.53
CDK3-201ENST00000425876 ATP5SQ99766 215 aa11.72□□□□□ -0.53
CDK3-201ENST00000425876 QTRT1Q9BXR0 403 aaKnown RBP11.72□□□□□ -0.53
CDK3-201ENST00000425876 BARX1Q9HBU1 254 aaPredicted RBP11.72□□□□□ -0.53
CDK3-201ENST00000425876 FOXA2Q9Y261 457 aaPredicted RBP11.72□□□□□ -0.53
CDK3-201ENST00000425876 MAST4O15021 2626 aa11.72□□□□□ -0.53
CDK3-201ENST00000425876 DOPEY2Q9Y3R5 2298 aa11.71□□□□□ -0.53
CDK3-201ENST00000425876 C15orf61A6NNL5 157 aa11.71□□□□□ -0.53
CDK3-201ENST00000425876 IGHV2-5P01817 119 aa11.71□□□□□ -0.53
CDK3-201ENST00000425876 MC5RP33032 325 aa11.71□□□□□ -0.53
CDK3-201ENST00000425876 RAB13P51153 203 aa11.71□□□□□ -0.53
CDK3-201ENST00000425876 CLINT1Q14677 625 aa11.71□□□□□ -0.53
CDK3-201ENST00000425876 SPANXN5Q5MJ07 72 aa11.71□□□□□ -0.53
CDK3-201ENST00000425876 VKORC1L1Q8N0U8 176 aa11.71□□□□□ -0.53
CDK3-201ENST00000425876 CITED4Q96RK1 184 aa11.71□□□□□ -0.53
CDK3-201ENST00000425876 TMEM14BQ9NUH8 114 aa11.71□□□□□ -0.53
CDK3-201ENST00000425876 BET1LQ9NYM9 111 aa11.71□□□□□ -0.53
CDK3-201ENST00000425876 STRAPQ9Y3F4 350 aaKnown RBP11.71□□□□□ -0.53
CDK3-201ENST00000425876 AMMECR1Q9Y4X0 333 aaPredicted RBP11.71□□□□□ -0.53
CDK3-201ENST00000425876 ANKRD34BA5PLL1 514 aa11.71□□□□□ -0.54
CDK3-201ENST00000425876 CEBPZOSA8MTT3 80 aa11.71□□□□□ -0.54
CDK3-201ENST00000425876 A8MXK9 166 aa11.71□□□□□ -0.54
CDK3-201ENST00000425876 IFNA17P01571 189 aa11.71□□□□□ -0.54
CDK3-201ENST00000425876 IGKV1-16P04430 117 aa11.71□□□□□ -0.54
CDK3-201ENST00000425876 PDLIM4P50479 330 aa11.71□□□□□ -0.54
CDK3-201ENST00000425876 TMEM267Q0VDI3 215 aaPredicted RBP11.71□□□□□ -0.54
CDK3-201ENST00000425876 EIF4E3Q8N5X7 224 aaKnown RBP11.71□□□□□ -0.54
CDK3-201ENST00000425876 TMEM217Q8N7C4 229 aa11.71□□□□□ -0.54
CDK3-201ENST00000425876 Q8N7P7 452 aa11.71□□□□□ -0.54
CDK3-201ENST00000425876 OR4C13Q8NGP0 309 aa11.71□□□□□ -0.54
CDK3-201ENST00000425876 LHX4Q969G2 390 aa11.71□□□□□ -0.54
CDK3-201ENST00000425876 TSNAXQ99598 290 aaKnown RBP11.71□□□□□ -0.54
CDK3-201ENST00000425876 CCL19Q99731 98 aa11.71□□□□□ -0.54
CDK3-201ENST00000425876 UNKLQ9H9P5 680 aaKnown RBP11.71□□□□□ -0.54
CDK3-201ENST00000425876 ONECUT1Q9UBC0 465 aa11.71□□□□□ -0.54
CDK3-201ENST00000425876 PRNDQ9UKY0 176 aa11.71□□□□□ -0.54
CDK3-201ENST00000425876 WASHC3Q9Y3C0 194 aa11.71□□□□□ -0.54
CDK3-201ENST00000425876 USP9YO00507 2555 aaPredicted RBP11.7□□□□□ -0.54
CDK3-201ENST00000425876 TRAV3A0A0B4J244 114 aa11.7□□□□□ -0.54
CDK3-201ENST00000425876 MFSD2BA6NFX1 497 aa11.7□□□□□ -0.54
CDK3-201ENST00000425876 BUB1B-PAK6H3BSN5 160 aa11.7□□□□□ -0.54
CDK3-201ENST00000425876 SHOXO15266 292 aa11.7□□□□□ -0.54
CDK3-201ENST00000425876 FBXO24O75426 580 aa11.7□□□□□ -0.54
CDK3-201ENST00000425876 IGHV4-39P01824 125 aa11.7□□□□□ -0.54
CDK3-201ENST00000425876 ARG1P05089 322 aa11.7□□□□□ -0.54
CDK3-201ENST00000425876 METTL15P1P0C7V9 234 aa11.7□□□□□ -0.54
CDK3-201ENST00000425876 PRTN3P24158 256 aa11.7□□□□□ -0.54
CDK3-201ENST00000425876 RAB5CP51148 216 aa11.7□□□□□ -0.54
CDK3-201ENST00000425876 OR2B8PP59922 312 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms