RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 DNAJC12Q9UKB3 198 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 MED31Q9Y3C7 131 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 GREB1LQ9C091 1923 aaPredicted RBP2.72□□□□□ -1.97
SF3B1-205ENST00000424674 LRRK1Q38SD2 2015 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 PDS5BQ9NTI5 1447 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 CHD2O14647 1828 aaKnown RBP2.71□□□□□ -1.98
SF3B1-205ENST00000424674 TRAV9-1A0A075B6T8 112 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 IGHV1-45A0A0A0MS14 117 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 KRTAP4-16G5E9R7 235 aaPredicted RBP2.71□□□□□ -1.98
SF3B1-205ENST00000424674 FAM72CH0Y354 149 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 M0R381 172 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 OVOL1O14753 267 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 CD5LO43866 347 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 LMX1BO60663 402 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 NRASP01111 189 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 IGLV2-11P01706 119 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 IGLV3-27P01718 113 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 IGHV3-23P01764 117 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 UCHL1P09936 223 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 SMIM17P0DL12 118 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 KDELR1P24390 212 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 OPRK1P41145 380 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 LPAR6P43657 344 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 GABRA2P47869 451 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 AKR1D1P51857 326 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 PPP3R1P63098 170 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 KRTAP24-1Q3LI83 254 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 FAM72AQ5TYM5 149 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 LYRM7Q5U5X0 104 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 FAM72DQ6L9T8 149 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 EBLN2Q6P2I7 272 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 GUSBP11Q6P575 273 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 RASL11AQ6T310 242 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 ZNF497Q6ZNH5 498 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 FAM72BQ86X60 149 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 MKXQ8IYA7 352 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 ZNF433Q8N7K0 673 aaPredicted RBP2.71□□□□□ -1.98
SF3B1-205ENST00000424674 YIPF7Q8N8F6 280 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 LINC01555Q8NAE3 123 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 NPBQ8NG41 125 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 OR2M3Q8NG83 312 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 OR4E2Q8NGC2 313 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 OR8A1Q8NGG7 326 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 IP6K3Q96PC2 410 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 CAMK2N2Q96S95 79 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 OR2J1Q9GZK6 312 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 PLEKHF2Q9H8W4 249 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 CXorf21Q9HAI6 301 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 TAF9BQ9HBM6 251 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 FAIMQ9NVQ4 179 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 MRPL16Q9NX20 251 aaKnown RBP2.71□□□□□ -1.98
SF3B1-205ENST00000424674 FBXL12Q9NXK8 326 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 ZNF230Q9UIE0 474 aaPredicted RBP2.71□□□□□ -1.98
SF3B1-205ENST00000424674 RPUSD1Q9UJJ7 312 aaKnown RBP2.71□□□□□ -1.98
SF3B1-205ENST00000424674 MYH3P11055 1940 aa2.71□□□□□ -1.98
SF3B1-205ENST00000424674 IBTKQ9P2D0 1353 aaPredicted RBP2.71□□□□□ -1.98
SF3B1-205ENST00000424674 ATRNO75882 1429 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 TNS3Q68CZ2 1445 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 FMN1Q68DA7 1419 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 IGLV7-46A0A075B6I9 117 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 A0A0J9YXY3 114 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 DHRS12A0PJE2 317 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 FABP5P3A8MUU1 101 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 C4orf51C9J302 202 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 CLDN25C9JDP6 229 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 CORTO00230 105 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 OR7C2O60412 319 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 DPM2O94777 84 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 SLC25A14O95258 325 aaPredicted RBP2.7□□□□□ -1.98
SF3B1-205ENST00000424674 FSTL3O95633 263 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 CXorf1O96002 111 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 LTAP01374 205 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 IFNA17P01571 189 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 OPN1SWP03999 348 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 IL1RNP18510 177 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 OPRM1P35372 400 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 RPL35P42766 123 aaKnown RBP2.7□□□□□ -1.98
SF3B1-205ENST00000424674 RPS25P62851 125 aaKnown RBP2.7□□□□□ -1.98
SF3B1-205ENST00000424674 RELAQ04206 551 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 OR8G1Q15617 311 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 MRPL2Q5T653 305 aaKnown RBP2.7□□□□□ -1.98
SF3B1-205ENST00000424674 ZNF429Q86V71 674 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 ZNF695Q8IW36 515 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 C8orf59Q8N0T1 100 aaPredicted RBP2.7□□□□□ -1.98
SF3B1-205ENST00000424674 ACBD7Q8N6N7 88 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 TCTEX1D1Q8N7M0 179 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 SLC25A29Q8N8R3 303 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 OR52R1Q8NGF1 315 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 OR10D4PQ8NGN7 298 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 OR5W2Q8NH69 310 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 TERB2Q8NHR7 220 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 MRPL30Q8TCC3 161 aaKnown RBP2.7□□□□□ -1.98
SF3B1-205ENST00000424674 TMEM106AQ96A25 262 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 TOMM6Q96B49 74 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 TRIB3Q96RU7 358 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 PRADC1Q9BSG0 188 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 WDR61Q9GZS3 305 aaKnown RBP2.7□□□□□ -1.98
SF3B1-205ENST00000424674 LPAR5Q9H1C0 372 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 FGF22Q9HCT0 170 aa2.7□□□□□ -1.98
SF3B1-205ENST00000424674 MCTS1Q9ULC4 181 aaKnown RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms