RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 ZNF525Q8N782 197 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 ASB13Q8WXK3 278 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 SPSB4Q96A44 273 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 OR2A7Q96R45 310 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 J3KRW8 73 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 BCL2L11O43521 198 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 REG1AP05451 166 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 DYNLT3P51808 116 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 UBE2L3P68036 154 aaKnown RBP8.16□□□□□ -1.1
CMSS1-201ENST00000421999 ATP6V1FQ16864 119 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 DHRS7BQ6IAN0 325 aaPredicted RBP8.16□□□□□ -1.1
CMSS1-201ENST00000421999 MYPOPQ86VE0 399 aaPredicted RBP8.16□□□□□ -1.1
CMSS1-201ENST00000421999 DUX5Q96PT3 197 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 OR4C12Q96R67 309 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 GAR1Q9NY12 217 aaKnown RBP8.16□□□□□ -1.1
CMSS1-201ENST00000421999 SLC45A2Q9UMX9 530 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 UMAD1C9J7I0 102 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 IGHV3-48P01763 117 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 MT-ND4LP03901 98 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 CDC34P49427 236 aaPredicted RBP8.16□□□□□ -1.1
CMSS1-201ENST00000421999 DSCR9P59020 149 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 FAM90A1Q86YD7 464 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 ZFP82Q8N141 532 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 SVBPQ8N300 66 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 GTF3AQ92664 365 aaKnown RBP8.16□□□□□ -1.1
CMSS1-201ENST00000421999 LINC00052Q96N35 136 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 SMIM7Q9BQ49 75 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 TM2D1Q9BX74 207 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 URGCP-MRPS24S4R325 110 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 LRRK2Q5S007 2527 aa8.16□□□□□ -1.1
CMSS1-201ENST00000421999 F8VVB4 439 aa8.15□□□□□ -1.1
CMSS1-201ENST00000421999 F8VWA3 439 aa8.15□□□□□ -1.1
CMSS1-201ENST00000421999 S1PR2O95136 353 aa8.15□□□□□ -1.1
CMSS1-201ENST00000421999 RPS10P46783 165 aaKnown RBP8.15□□□□□ -1.1
CMSS1-201ENST00000421999 SSX7Q7RTT5 188 aa8.15□□□□□ -1.1
CMSS1-201ENST00000421999 OR4A5Q8NH83 315 aa8.15□□□□□ -1.1
CMSS1-201ENST00000421999 GPR132Q9UNW8 380 aa8.15□□□□□ -1.1
CMSS1-201ENST00000421999 SRRM5B3KS81 715 aa8.15□□□□□ -1.1
CMSS1-201ENST00000421999 H0Y980 276 aa8.15□□□□□ -1.1
CMSS1-201ENST00000421999 TAGLN2P37802 199 aaKnown RBP8.15□□□□□ -1.1
CMSS1-201ENST00000421999 TCTEX1D1Q8N7M0 179 aa8.15□□□□□ -1.1
CMSS1-201ENST00000421999 C11orf44Q8N8P7 122 aa8.15□□□□□ -1.1
CMSS1-201ENST00000421999 OR10G4Q8NGN3 311 aa8.15□□□□□ -1.1
CMSS1-201ENST00000421999 OR10G9Q8NGN4 311 aa8.15□□□□□ -1.1
CMSS1-201ENST00000421999 OR10G7Q8NGN6 311 aa8.15□□□□□ -1.1
CMSS1-201ENST00000421999 PLPPR1Q8TBJ4 325 aa8.15□□□□□ -1.1
CMSS1-201ENST00000421999 NAGKQ9UJ70 344 aa8.15□□□□□ -1.1
CMSS1-201ENST00000421999 B4DSR2 109 aa8.15□□□□□ -1.11
CMSS1-201ENST00000421999 C1QL1O75973 258 aa8.15□□□□□ -1.11
CMSS1-201ENST00000421999 KBTBD11O94819 623 aa8.15□□□□□ -1.11
CMSS1-201ENST00000421999 VSIG10L2P0DP72 767 aa8.15□□□□□ -1.11
CMSS1-201ENST00000421999 RAB5CP51148 216 aa8.15□□□□□ -1.11
CMSS1-201ENST00000421999 RAB5BP61020 215 aa8.15□□□□□ -1.11
CMSS1-201ENST00000421999 B2MP61769 119 aa8.15□□□□□ -1.11
CMSS1-201ENST00000421999 RPL7L1Q6DKI1 246 aaKnown RBP8.15□□□□□ -1.11
CMSS1-201ENST00000421999 SLC35E3Q7Z769 313 aa8.15□□□□□ -1.11
CMSS1-201ENST00000421999 RBM14Q96PK6 669 aaKnown RBP8.15□□□□□ -1.11
CMSS1-201ENST00000421999 TMEM222Q9H0R3 208 aa8.15□□□□□ -1.11
CMSS1-201ENST00000421999 PLSCR2Q9NRY7 297 aa8.15□□□□□ -1.11
CMSS1-201ENST00000421999 MMP24Q9Y5R2 645 aa8.15□□□□□ -1.11
CMSS1-201ENST00000421999 REV3LO60673 3130 aa8.15□□□□□ -1.11
CMSS1-201ENST00000421999 COL6A3P12111 3177 aa8.15□□□□□ -1.11
CMSS1-201ENST00000421999 USP9YO00507 2555 aaPredicted RBP8.15□□□□□ -1.11
CMSS1-201ENST00000421999 MAP1LC3B2A6NCE7 125 aa8.15□□□□□ -1.11
CMSS1-201ENST00000421999 H7BYZ3 331 aa8.15□□□□□ -1.11
CMSS1-201ENST00000421999 MBNL2Q5VZF2 373 aaKnown RBP8.15□□□□□ -1.11
CMSS1-201ENST00000421999 Q8NA96 180 aa8.15□□□□□ -1.11
CMSS1-201ENST00000421999 MAP1LC3BQ9GZQ8 125 aa8.15□□□□□ -1.11
CMSS1-201ENST00000421999 PLSCR3Q9NRY6 295 aa8.15□□□□□ -1.11
CMSS1-201ENST00000421999 A6NNC1 897 aa8.14□□□□□ -1.11
CMSS1-201ENST00000421999 RNF223E7ERA6 249 aa8.14□□□□□ -1.11
CMSS1-201ENST00000421999 HSPE1P61604 102 aaKnown RBP8.14□□□□□ -1.11
CMSS1-201ENST00000421999 KIAA0141Q14154 515 aaPredicted RBP8.14□□□□□ -1.11
CMSS1-201ENST00000421999 ZNF818PQ6ZRF7 136 aa8.14□□□□□ -1.11
CMSS1-201ENST00000421999 RBPMS2Q6ZRY4 209 aaKnown RBP8.14□□□□□ -1.11
CMSS1-201ENST00000421999 COLCA1Q6ZS62 124 aa8.14□□□□□ -1.11
CMSS1-201ENST00000421999 QTRT1Q9BXR0 403 aaKnown RBP8.14□□□□□ -1.11
CMSS1-201ENST00000421999 SPCS3P61009 180 aa8.14□□□□□ -1.11
CMSS1-201ENST00000421999 CXorf66Q5JRM2 361 aaPredicted RBP8.14□□□□□ -1.11
CMSS1-201ENST00000421999 PATZ1Q9HBE1 687 aaKnown RBP8.14□□□□□ -1.11
CMSS1-201ENST00000421999 C1orf196B1AJZ1 125 aa8.14□□□□□ -1.11
CMSS1-201ENST00000421999 SIGLEC5O15389 551 aa8.14□□□□□ -1.11
CMSS1-201ENST00000421999 RND2P52198 227 aa8.14□□□□□ -1.11
CMSS1-201ENST00000421999 TPPP2P59282 170 aa8.14□□□□□ -1.11
CMSS1-201ENST00000421999 ZP1P60852 638 aa8.14□□□□□ -1.11
CMSS1-201ENST00000421999 TEPPQ6URK8 271 aa8.14□□□□□ -1.11
CMSS1-201ENST00000421999 OR5B3Q8NH48 314 aa8.14□□□□□ -1.11
CMSS1-201ENST00000421999 ANGPTL6Q8NI99 470 aa8.14□□□□□ -1.11
CMSS1-201ENST00000421999 A0A0A6YYD4 124 aa8.13□□□□□ -1.11
CMSS1-201ENST00000421999 XKRY2A2RUG3 117 aa8.13□□□□□ -1.11
CMSS1-201ENST00000421999 TMEM178BH3BS89 294 aa8.13□□□□□ -1.11
CMSS1-201ENST00000421999 MELTFP08582 738 aa8.13□□□□□ -1.11
CMSS1-201ENST00000421999 COL8A2P25067 703 aa8.13□□□□□ -1.11
CMSS1-201ENST00000421999 SULT1A1P50225 295 aa8.13□□□□□ -1.11
CMSS1-201ENST00000421999 WDR25Q64LD2 544 aaPredicted RBP8.13□□□□□ -1.11
CMSS1-201ENST00000421999 JMJD8Q96S16 334 aa8.13□□□□□ -1.11
CMSS1-201ENST00000421999 NPFFR1Q9GZQ6 430 aa8.13□□□□□ -1.11
CMSS1-201ENST00000421999 NPIPB11E5RHQ5 1161 aa8.13□□□□□ -1.11
CMSS1-201ENST00000421999 PJVKQ0ZLH3 352 aa8.13□□□□□ -1.11
CMSS1-201ENST00000421999 TMEM42Q69YG0 159 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms