RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 ATP5G3P48201 142 aa11.07□□□□□ -0.64
MCF2L-213ENST00000421756 ZNF506Q5JVG8 444 aa11.07□□□□□ -0.64
MCF2L-213ENST00000421756 IGFBPL1Q8WX77 278 aa11.07□□□□□ -0.64
MCF2L-213ENST00000421756 IL22RA2Q969J5 263 aa11.07□□□□□ -0.64
MCF2L-213ENST00000421756 ZNF251Q9BRH9 671 aa11.07□□□□□ -0.64
MCF2L-213ENST00000421756 DUXBA0A1W2PPF3 345 aa11.07□□□□□ -0.64
MCF2L-213ENST00000421756 C5orf52A6NGY3 159 aa11.07□□□□□ -0.64
MCF2L-213ENST00000421756 PSMB3P49720 205 aa11.07□□□□□ -0.64
MCF2L-213ENST00000421756 PRSS8Q16651 343 aa11.07□□□□□ -0.64
MCF2L-213ENST00000421756 TMEM41BQ5BJD5 291 aa11.07□□□□□ -0.64
MCF2L-213ENST00000421756 FAM90A2PQ658T7 463 aa11.07□□□□□ -0.64
MCF2L-213ENST00000421756 RHOVQ96L33 236 aa11.07□□□□□ -0.64
MCF2L-213ENST00000421756 IGHV3-21A0A0B4J1V1 117 aa11.07□□□□□ -0.64
MCF2L-213ENST00000421756 PRSS44E7EML9 344 aa11.07□□□□□ -0.64
MCF2L-213ENST00000421756 AP4M1O00189 453 aa11.07□□□□□ -0.64
MCF2L-213ENST00000421756 CCL3L1P16619 93 aa11.07□□□□□ -0.64
MCF2L-213ENST00000421756 THBS3P49746 956 aa11.07□□□□□ -0.64
MCF2L-213ENST00000421756 SLC35E4Q6ICL7 350 aa11.07□□□□□ -0.64
MCF2L-213ENST00000421756 FAM215AQ9Y5M1 114 aa11.07□□□□□ -0.64
MCF2L-213ENST00000421756 TMEM210A6NLX4 147 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 IGHG3P01860 377 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 PAX6P26367 422 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 S100A2P29034 98 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 SELENOVP59797 346 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 FOXC1Q12948 553 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 FRZBQ92765 325 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 LRFN3Q9BTN0 628 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 NPCDR1Q9BY65 106 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 TRBV6-6A0A0A6YYG2 114 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 MORN2Q502X0 79 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 KHDC3LQ587J8 217 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 HEPN1Q6WQI6 88 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 C16orf82Q7Z2V1 217 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 FAM90A1Q86YD7 464 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 CA5BP1Q8WTZ4 195 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 PINX1Q96BK5 328 aaKnown RBP11.06□□□□□ -0.64
MCF2L-213ENST00000421756 MEGF10Q96KG7 1140 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 CALYQ9NYX4 217 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 SLC25A15Q9Y619 301 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 KMT2EQ8IZD2 1858 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 LYNX1G3V0Z9 82 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 IFNL4K9M1U5 179 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 LYNX1P0DP58 116 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 AGAP20933 346 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 MEF2BQ02080 365 aaPredicted RBP11.06□□□□□ -0.64
MCF2L-213ENST00000421756 Q8TCH9 128 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 NEUROG1Q92886 237 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 ABHD17AQ96GS6 310 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 PRO1933Q9H354 126 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 TMEM140Q9NV12 185 aa11.06□□□□□ -0.64
MCF2L-213ENST00000421756 NDUFB4O95168 129 aa11.05□□□□□ -0.64
MCF2L-213ENST00000421756 TRGC1P0CF51 173 aa11.05□□□□□ -0.64
MCF2L-213ENST00000421756 DUTP33316 252 aaKnown RBP11.05□□□□□ -0.64
MCF2L-213ENST00000421756 CD81P60033 236 aa11.05□□□□□ -0.64
MCF2L-213ENST00000421756 AGMATQ9BSE5 352 aa11.05□□□□□ -0.64
MCF2L-213ENST00000421756 PCGF1Q9BSM1 259 aa11.05□□□□□ -0.64
MCF2L-213ENST00000421756 TMEM147Q9BVK8 224 aa11.05□□□□□ -0.64
MCF2L-213ENST00000421756 PARLQ9H300 379 aa11.05□□□□□ -0.64
MCF2L-213ENST00000421756 GCM1Q9NP62 436 aa11.05□□□□□ -0.64
MCF2L-213ENST00000421756 FABP1P07148 127 aa11.05□□□□□ -0.64
MCF2L-213ENST00000421756 COX5AP20674 150 aa11.05□□□□□ -0.64
MCF2L-213ENST00000421756 CD1BP29016 333 aa11.05□□□□□ -0.64
MCF2L-213ENST00000421756 SPATA31B1PQ5VZV4 182 aa11.05□□□□□ -0.64
MCF2L-213ENST00000421756 PLSCR4Q9NRQ2 329 aa11.05□□□□□ -0.64
MCF2L-213ENST00000421756 VAX2Q9UIW0 290 aa11.05□□□□□ -0.64
MCF2L-213ENST00000421756 BSNQ9UPA5 3926 aa11.05□□□□□ -0.64
MCF2L-213ENST00000421756 C11orf94C9JXX5 98 aa11.05□□□□□ -0.64
MCF2L-213ENST00000421756 IGKV1-16P04430 117 aa11.05□□□□□ -0.64
MCF2L-213ENST00000421756 CDC34P49427 236 aaPredicted RBP11.05□□□□□ -0.64
MCF2L-213ENST00000421756 C1orf87Q8N0U7 546 aa11.05□□□□□ -0.64
MCF2L-213ENST00000421756 FAM216AQ8WUB2 273 aa11.05□□□□□ -0.64
MCF2L-213ENST00000421756 HSPB7Q9UBY9 170 aa11.05□□□□□ -0.64
MCF2L-213ENST00000421756 HIST1H2BKO60814 126 aa11.04□□□□□ -0.64
MCF2L-213ENST00000421756 IFNA1P01562 189 aa11.04□□□□□ -0.64
MCF2L-213ENST00000421756 HIST1H2BJP06899 126 aa11.04□□□□□ -0.64
MCF2L-213ENST00000421756 HIST1H2BOP23527 126 aa11.04□□□□□ -0.64
MCF2L-213ENST00000421756 HIST1H2BBP33778 126 aa11.04□□□□□ -0.64
MCF2L-213ENST00000421756 HIST1H2BDP58876 126 aa11.04□□□□□ -0.64
MCF2L-213ENST00000421756 HIST1H2BCP62807 126 aa11.04□□□□□ -0.64
MCF2L-213ENST00000421756 MRPS11P82912 194 aaKnown RBP11.04□□□□□ -0.64
MCF2L-213ENST00000421756 HIST2H2BEQ16778 126 aa11.04□□□□□ -0.64
MCF2L-213ENST00000421756 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.04□□□□□ -0.64
MCF2L-213ENST00000421756 HIST1H2BHQ93079 126 aa11.04□□□□□ -0.64
MCF2L-213ENST00000421756 HIST1H2BNQ99877 126 aa11.04□□□□□ -0.64
MCF2L-213ENST00000421756 HIST1H2BMQ99879 126 aa11.04□□□□□ -0.64
MCF2L-213ENST00000421756 HIPK2Q9H2X6 1198 aa11.04□□□□□ -0.64
MCF2L-213ENST00000421756 MS4A5Q9H3V2 200 aa11.04□□□□□ -0.64
MCF2L-213ENST00000421756 OR6C3Q9NZP0 311 aa11.04□□□□□ -0.64
MCF2L-213ENST00000421756 ZFYVE26Q68DK2 2539 aa11.04□□□□□ -0.64
MCF2L-213ENST00000421756 BTBD17A6NE02 478 aa11.04□□□□□ -0.64
MCF2L-213ENST00000421756 AHRRA9YTQ3 701 aa11.04□□□□□ -0.64
MCF2L-213ENST00000421756 H7BYZ3 331 aa11.04□□□□□ -0.64
MCF2L-213ENST00000421756 SLC35B1P78383 322 aa11.04□□□□□ -0.64
MCF2L-213ENST00000421756 SRSF7Q16629 238 aaKnown RBP eCLIP11.04□□□□□ -0.64
MCF2L-213ENST00000421756 CT45A1Q5HYN5 189 aa11.04□□□□□ -0.64
MCF2L-213ENST00000421756 TMEM14EPQ6UXP3 125 aa11.04□□□□□ -0.64
MCF2L-213ENST00000421756 CT45A3Q8NHU0 189 aa11.04□□□□□ -0.64
MCF2L-213ENST00000421756 ENY2Q9NPA8 101 aa11.04□□□□□ -0.64
MCF2L-213ENST00000421756 SAA2-SAA4A0A096LPE2 208 aa11.03□□□□□ -0.64
MCF2L-213ENST00000421756 ZNF891A8MT65 544 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms