RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.08□□□□□ -1.44
VIM-202ENST00000421459 OR4A4PQ8NGN8 299 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 OR10J5Q8NHC4 309 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 DYNLRB2Q8TF09 96 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 LINC00476Q8WZB0 136 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 DDB2Q92466 427 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 FAM3DQ96BQ1 224 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 TMEM68Q96MH6 324 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 OVOL2Q9BRP0 275 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 ZNF430Q9H8G1 570 aaPredicted RBP6.08□□□□□ -1.44
VIM-202ENST00000421459 ZC4H2Q9NQZ6 224 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 PEMTQ9UBM1 199 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 DNAH2Q9P225 4427 aa6.08□□□□□ -1.44
VIM-202ENST00000421459 RYR1P21817 5038 aa6.07□□□□□ -1.44
VIM-202ENST00000421459 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.07□□□□□ -1.44
VIM-202ENST00000421459 A0A1B0GW64 132 aa6.07□□□□□ -1.44
VIM-202ENST00000421459 RAB27BO00194 218 aa6.07□□□□□ -1.44
VIM-202ENST00000421459 NDUFB8O95169 186 aa6.07□□□□□ -1.44
VIM-202ENST00000421459 TNFAIP8O95379 198 aa6.07□□□□□ -1.44
VIM-202ENST00000421459 FCGR3AP08637 254 aa6.07□□□□□ -1.44
VIM-202ENST00000421459 HSMCR30P0CW71 290 aa6.07□□□□□ -1.44
VIM-202ENST00000421459 SAA1P0DJI8 122 aaPredicted RBP6.07□□□□□ -1.44
VIM-202ENST00000421459 MYOD1P15172 320 aa6.07□□□□□ -1.44
VIM-202ENST00000421459 DUTP33316 252 aaKnown RBP6.07□□□□□ -1.44
VIM-202ENST00000421459 KIR2DS2P43631 304 aa6.07□□□□□ -1.44
VIM-202ENST00000421459 RPL30P62888 115 aaKnown RBP6.07□□□□□ -1.44
VIM-202ENST00000421459 RTL8BQ17RB0 113 aa6.07□□□□□ -1.44
VIM-202ENST00000421459 C15orf32Q32M92 178 aa6.07□□□□□ -1.44
VIM-202ENST00000421459 VMA21Q3ZAQ7 101 aa6.07□□□□□ -1.44
VIM-202ENST00000421459 TEX45Q8NA69 505 aa6.07□□□□□ -1.44
VIM-202ENST00000421459 OR2K2Q8NGT1 345 aa6.07□□□□□ -1.44
VIM-202ENST00000421459 IL17DQ8TAD2 202 aa6.07□□□□□ -1.44
VIM-202ENST00000421459 THRSPQ92748 146 aa6.07□□□□□ -1.44
VIM-202ENST00000421459 CABLES2Q9BTV7 478 aa6.07□□□□□ -1.44
VIM-202ENST00000421459 MND1Q9BWT6 205 aa6.07□□□□□ -1.44
VIM-202ENST00000421459 SLC2A8Q9NY64 477 aa6.07□□□□□ -1.44
VIM-202ENST00000421459 MLXQ9UH92 298 aa6.07□□□□□ -1.44
VIM-202ENST00000421459 MGAT4AQ9UM21 535 aa6.07□□□□□ -1.44
VIM-202ENST00000421459 RBM7Q9Y580 266 aaKnown RBP6.07□□□□□ -1.44
VIM-202ENST00000421459 A0A0J9YWU9 116 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 FAM223BA6NKX1 122 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 TEX22C9J3V5 150 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 AIREO43918 545 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 FCGR3BO75015 233 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 TUSC2O75896 110 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 SCAF4O95104 1147 aaKnown RBP6.06□□□□□ -1.44
VIM-202ENST00000421459 REG1AP05451 166 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 IL6RP08887 468 aaPredicted RBP6.06□□□□□ -1.44
VIM-202ENST00000421459 SMIM18P0DKX4 95 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 CBLN1P23435 193 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 CRHBPP24387 322 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 CALRP27797 417 aaKnown RBP6.06□□□□□ -1.44
VIM-202ENST00000421459 OR10A3P58181 314 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 GABARAPL2P60520 117 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 FABP5Q01469 135 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 CBX3Q13185 183 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 IRF3Q14653 427 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 TM4SF20Q53R12 229 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 CLEC19AQ6UXS0 136 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 FAM223AQ8IWN6 122 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 TMEM61Q8N0U2 210 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 RPP25LQ8N5L8 163 aaKnown RBP6.06□□□□□ -1.44
VIM-202ENST00000421459 TTC9CQ8N5M4 171 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 OR56B1Q8NGI3 324 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 UFD1Q92890 307 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 RAB3CQ96E17 227 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 CCDC140Q96MF4 163 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 GPHA2Q96T91 129 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 DCUN1D5Q9BTE7 237 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 FBXL7Q9UJT9 491 aa6.06□□□□□ -1.44
VIM-202ENST00000421459 IGHV3-35A0A0C4DH35 117 aa6.05□□□□□ -1.44
VIM-202ENST00000421459 ZNF320A2RRD8 509 aa6.05□□□□□ -1.44
VIM-202ENST00000421459 TMEM213A2RRL7 107 aa6.05□□□□□ -1.44
VIM-202ENST00000421459 CXorf65A6NEN9 183 aa6.05□□□□□ -1.44
VIM-202ENST00000421459 GGCTO75223 188 aaKnown RBP6.05□□□□□ -1.44
VIM-202ENST00000421459 RRASP10301 218 aa6.05□□□□□ -1.44
VIM-202ENST00000421459 AREGP15514 252 aa6.05□□□□□ -1.44
VIM-202ENST00000421459 NFYAP23511 347 aaPredicted RBP6.05□□□□□ -1.44
VIM-202ENST00000421459 MAP2K4P45985 399 aa6.05□□□□□ -1.44
VIM-202ENST00000421459 SERPINB10P48595 397 aa6.05□□□□□ -1.44
VIM-202ENST00000421459 BRWD1-AS2P59051 145 aa6.05□□□□□ -1.44
VIM-202ENST00000421459 MRPS15P82914 257 aaKnown RBP6.05□□□□□ -1.44
VIM-202ENST00000421459 CDK10Q15131 360 aa6.05□□□□□ -1.44
VIM-202ENST00000421459 BTNL8Q6UX41 500 aa6.05□□□□□ -1.44
VIM-202ENST00000421459 LAX1Q8IWV1 398 aa6.05□□□□□ -1.44
VIM-202ENST00000421459 H1FOOQ8IZA3 346 aaPredicted RBP6.05□□□□□ -1.44
VIM-202ENST00000421459 UXS1Q8NBZ7 420 aa6.05□□□□□ -1.44
VIM-202ENST00000421459 NECAP1Q8NC96 275 aa6.05□□□□□ -1.44
VIM-202ENST00000421459 OR10R2Q8NGX6 335 aa6.05□□□□□ -1.44
VIM-202ENST00000421459 KCTD12Q96CX2 325 aaKnown RBP6.05□□□□□ -1.44
VIM-202ENST00000421459 FANCD2OSQ96PS1 177 aa6.05□□□□□ -1.44
VIM-202ENST00000421459 FYTTD1Q96QD9 318 aaKnown RBP6.05□□□□□ -1.44
VIM-202ENST00000421459 GINS4Q9BRT9 223 aa6.05□□□□□ -1.44
VIM-202ENST00000421459 ST6GALNAC5Q9BVH7 336 aa6.05□□□□□ -1.44
VIM-202ENST00000421459 DUSP21Q9H596 190 aa6.05□□□□□ -1.44
VIM-202ENST00000421459 UBQLN2Q9UHD9 624 aa6.05□□□□□ -1.44
VIM-202ENST00000421459 RAB22AQ9UL26 194 aa6.05□□□□□ -1.44
VIM-202ENST00000421459 BLOC1S6Q9UL45 172 aa6.05□□□□□ -1.44
VIM-202ENST00000421459 V9GY05 133 aa6.05□□□□□ -1.44
VIM-202ENST00000421459 DYNC1H1Q14204 4646 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms