RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 OR8H1Q8NGG4 311 aa8.19□□□□□ -1.1
HMGA1P6-201ENST00000418454 OR5B3Q8NH48 314 aa8.19□□□□□ -1.1
HMGA1P6-201ENST00000418454 OR4A16Q8NH70 328 aa8.19□□□□□ -1.1
HMGA1P6-201ENST00000418454 GRPEL2Q8TAA5 225 aa8.19□□□□□ -1.1
HMGA1P6-201ENST00000418454 PHYHIPLQ96FC7 376 aa8.19□□□□□ -1.1
HMGA1P6-201ENST00000418454 GPHA2Q96T91 129 aa8.19□□□□□ -1.1
HMGA1P6-201ENST00000418454 TSNAXQ99598 290 aaKnown RBP8.19□□□□□ -1.1
HMGA1P6-201ENST00000418454 FOXC2Q99958 501 aa8.19□□□□□ -1.1
HMGA1P6-201ENST00000418454 LYRM2Q9NU23 88 aaPredicted RBP8.19□□□□□ -1.1
HMGA1P6-201ENST00000418454 MBD2Q9UBB5 411 aa8.19□□□□□ -1.1
HMGA1P6-201ENST00000418454 CACNG5Q9UF02 275 aa8.19□□□□□ -1.1
HMGA1P6-201ENST00000418454 FOXA2Q9Y261 457 aaPredicted RBP8.19□□□□□ -1.1
HMGA1P6-201ENST00000418454 USP9XQ93008 2570 aaPredicted RBP8.19□□□□□ -1.1
HMGA1P6-201ENST00000418454 KIAA2026Q5HYC2 2103 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 ZFYVE26Q68DK2 2539 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 KANTRA0A1W2PQU2 76 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 FAM157AC9JC47 383 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 UPK2O00526 184 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 CHST1O43916 411 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 CRYZL1O95825 349 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 IGHV3-7P01780 117 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 CXCL2P19875 107 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 COL8A1P27658 744 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 RPL12P30050 165 aaKnown RBP8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 BRS3P32247 399 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 AP2S1P53680 142 aaPredicted RBP8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 HSPE1P61604 102 aaKnown RBP8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 VAMP2P63027 116 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 RELBQ01201 579 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 TNFRSF9Q07011 255 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 OPCMLQ14982 345 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 VMA21Q3ZAQ7 101 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 CXorf66Q5JRM2 361 aaPredicted RBP8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 ZNF767PQ75MW2 155 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 MRPL41Q8IXM3 137 aaKnown RBP8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 OR2C3Q8N628 320 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 TMEM167AQ8TBQ9 72 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 DCUN1D4Q92564 292 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 TBX15Q96SF7 602 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 ARPC5LQ9BPX5 153 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 SRSF8Q9BRL6 282 aaKnown RBP8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 MRPL20Q9BYC9 149 aaKnown RBP8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 MS4A7Q9GZW8 240 aaPredicted RBP8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 NARFLQ9H6Q4 476 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 MMP26Q9NRE1 261 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 TMEM14BQ9NUH8 114 aa8.18□□□□□ -1.1
HMGA1P6-201ENST00000418454 A0A0G2JRQ6 117 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 RNF222A6NCQ9 220 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 C15orf61A6NNL5 157 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 RNASEK-C17orf49H0YIS7 233 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 H7C2Y5 167 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 SHOXO15266 292 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 BCL2L11O43521 198 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 JTBO76095 146 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 KBTBD11O94819 623 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 HKR1P10072 659 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 HOXB4P17483 251 aaPredicted RBP8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 COMPP49747 757 aaPredicted RBP8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 NKX2-5P52952 324 aaPredicted RBP8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 S100A10P60903 97 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 ATP6V1FQ16864 119 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 LRRC37A5PQ49AS3 106 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 OR4A47Q6IF82 309 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 EIF5AL1Q6IS14 154 aaKnown RBP8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 HSD17B13Q7Z5P4 300 aaPredicted RBP8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 STPG2Q8N412 459 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 NPBQ8NG41 125 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 STOML3Q8TAV4 291 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 CLCC1Q96S66 551 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 REG4Q9BYZ8 158 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 ARL6Q9H0F7 186 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 MEGF9Q9H1U4 602 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 TMEM140Q9NV12 185 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 OR5AC2Q9NZP5 309 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 RCL1Q9Y2P8 373 aaKnown RBP8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 AUP1Q9Y679 476 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 U3KQ87 197 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 MYO18BQ8IUG5 2567 aa8.17□□□□□ -1.1
HMGA1P6-201ENST00000418454 FLNCQ14315 2725 aa8.16□□□□□ -1.1
HMGA1P6-201ENST00000418454 A0A1W2PPI3 338 aa8.16□□□□□ -1.1
HMGA1P6-201ENST00000418454 MOSP00540 346 aa8.16□□□□□ -1.1
HMGA1P6-201ENST00000418454 IFNA7P01567 189 aa8.16□□□□□ -1.1
HMGA1P6-201ENST00000418454 IGKV1-16P04430 117 aa8.16□□□□□ -1.1
HMGA1P6-201ENST00000418454 FAM106CPP0CH98 169 aa8.16□□□□□ -1.1
HMGA1P6-201ENST00000418454 KRTAP10-9P60411 292 aa8.16□□□□□ -1.1
HMGA1P6-201ENST00000418454 RPS16P62249 146 aaKnown RBP8.16□□□□□ -1.1
HMGA1P6-201ENST00000418454 POLR2GP62487 172 aaKnown RBP eCLIP8.16□□□□□ -1.1
HMGA1P6-201ENST00000418454 TEX261Q6UWH6 196 aa8.16□□□□□ -1.1
HMGA1P6-201ENST00000418454 HRNRQ86YZ3 2850 aaPredicted RBP8.16□□□□□ -1.1
HMGA1P6-201ENST00000418454 MMD2Q8IY49 270 aa8.16□□□□□ -1.1
HMGA1P6-201ENST00000418454 OR2T10Q8NGZ9 312 aa8.16□□□□□ -1.1
HMGA1P6-201ENST00000418454 HARBI1Q96MB7 349 aa8.16□□□□□ -1.1
HMGA1P6-201ENST00000418454 GGACTQ9BVM4 153 aa8.16□□□□□ -1.1
HMGA1P6-201ENST00000418454 HIPK2Q9H2X6 1198 aa8.16□□□□□ -1.1
HMGA1P6-201ENST00000418454 SIRT7Q9NRC8 400 aa8.16□□□□□ -1.1
HMGA1P6-201ENST00000418454 C1RLQ9NZP8 487 aa8.16□□□□□ -1.1
HMGA1P6-201ENST00000418454 LSM5Q9Y4Y9 91 aaKnown RBP8.16□□□□□ -1.1
HMGA1P6-201ENST00000418454 MALRD1Q5VYJ5 2156 aa8.15□□□□□ -1.1
HMGA1P6-201ENST00000418454 IGHV1-69DA0A0B4J2H0 117 aa8.15□□□□□ -1.1
HMGA1P6-201ENST00000418454 CENPVL3A0A0U1RRI6 287 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms