RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 NYNRINQ9P2P1 1898 aaKnown RBP9.62□□□□□ -0.87
PTCH1-205ENST00000418258 TNFSF10P50591 281 aa9.62□□□□□ -0.87
PTCH1-205ENST00000418258 PET117Q6UWS5 81 aa9.62□□□□□ -0.87
PTCH1-205ENST00000418258 NACAE9PAV3 2078 aa9.62□□□□□ -0.87
PTCH1-205ENST00000418258 ZGRF1Q86YA3 2104 aa9.62□□□□□ -0.87
PTCH1-205ENST00000418258 CHD3Q12873 2000 aaKnown RBP9.62□□□□□ -0.87
PTCH1-205ENST00000418258 FBLL1A6NHQ2 334 aaKnown RBP9.62□□□□□ -0.87
PTCH1-205ENST00000418258 ABHD17AQ96GS6 310 aa9.62□□□□□ -0.87
PTCH1-205ENST00000418258 TGFAP01135 160 aa9.62□□□□□ -0.87
PTCH1-205ENST00000418258 SERF2P84101 59 aa9.62□□□□□ -0.87
PTCH1-205ENST00000418258 MBNL2Q5VZF2 373 aaKnown RBP9.62□□□□□ -0.87
PTCH1-205ENST00000418258 DLL3Q9NYJ7 618 aa9.62□□□□□ -0.87
PTCH1-205ENST00000418258 SUMO2P61956 95 aaKnown RBP9.62□□□□□ -0.87
PTCH1-205ENST00000418258 TMEM177Q53S58 311 aa9.62□□□□□ -0.87
PTCH1-205ENST00000418258 OR4X2Q8NGF9 303 aa9.62□□□□□ -0.87
PTCH1-205ENST00000418258 LSM10Q969L4 123 aaKnown RBP9.62□□□□□ -0.87
PTCH1-205ENST00000418258 PLXND1Q9Y4D7 1925 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 C9JCJ5 164 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 DNLZQ5SXM8 178 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 SLC25A47Q6Q0C1 308 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 H1FOOQ8IZA3 346 aaPredicted RBP9.61□□□□□ -0.87
PTCH1-205ENST00000418258 FGFRL1Q8N441 504 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 PILRAQ9UKJ1 303 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 MED12Q93074 2177 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 ELOA3CA0A087WX78 387 aaPredicted RBP9.61□□□□□ -0.87
PTCH1-205ENST00000418258 CFDP00746 253 aaPredicted RBP9.61□□□□□ -0.87
PTCH1-205ENST00000418258 AMY1AP04745 511 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 ARL14EPLP0DKL9 152 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.61□□□□□ -0.871e-6■■■■□ 23.7
PTCH1-205ENST00000418258 MRPS16Q9Y3D3 137 aaKnown RBP9.61□□□□□ -0.87
PTCH1-205ENST00000418258 IGHV3-49A0A0A0MS15 119 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 MARCH11A6NNE9 402 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 TMEM186Q96B77 213 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 GPHA2Q96T91 129 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 CEACAM4O75871 244 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 OR13C6PQ8NH95 151 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 PTPRDP23468 1912 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 TNS1Q9HBL0 1735 aaKnown RBP9.61□□□□□ -0.87
PTCH1-205ENST00000418258 A0A1W2PQM1 296 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 RBFOX2O43251 390 aaKnown RBP eCLIP9.61□□□□□ -0.87
PTCH1-205ENST00000418258 PQLC2Q6ZP29 291 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 Q6ZT83 130 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 OR11H7Q8NGC8 314 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 C7orf69Q9H7B7 122 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 CACNG7P62955 275 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 TIMM23BQ5SRD1 257 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 RFLNBQ8N5W9 214 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 KIR2DL4Q99706 377 aa9.61□□□□□ -0.87
PTCH1-205ENST00000418258 FAM27E3Q08E93 113 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 UNC119Q13432 240 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 ZNRF1Q8ND25 227 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 OR51G1Q8NGK1 321 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 ZNF418Q8TF45 676 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-205ENST00000418258 TIAF1O95411 115 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 HINT1P49773 126 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-205ENST00000418258 RPS20P60866 119 aaKnown RBP9.6□□□□□ -0.87
PTCH1-205ENST00000418258 MIC13Q5XKP0 118 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 FAM181AQ8N9Y4 354 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 NEU4Q8WWR8 484 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-205ENST00000418258 DUX3Q96PT4 197 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 HIST1H4GQ99525 98 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 IGHV3OR16-13A0A075B7E8 117 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 A0A087X0M5 115 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 IGHV3-74A0A0B4J1X5 117 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 A0A1B0GX30 115 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 TMEM218A2RU14 115 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 C17orf51A8MQB3 221 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 DIRC3C9JPN6 131 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 RUNX1Q01196 453 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 CD69Q07108 199 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 C1orf162Q8NEQ5 155 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-205ENST00000418258 SCARF2Q96GP6 870 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-205ENST00000418258 PKIBQ9C010 78 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 SRSF12Q8WXF0 261 aaKnown RBP9.6□□□□□ -0.87
PTCH1-205ENST00000418258 GPR61Q9BZJ8 451 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 A0A1W2PP11 408 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 ZIC3O60481 467 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 PLAC1Q9HBJ0 212 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 V9GYH0 126 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 FOXI3A8MTJ6 420 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-205ENST00000418258 PGLYRP1O75594 196 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-205ENST00000418258 IL4P05112 153 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 MARVELD3Q96A59 401 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 OR51M1Q9H341 326 aa9.6□□□□□ -0.87
PTCH1-205ENST00000418258 IGKV1D-33P01593 117 aa9.59□□□□□ -0.87
PTCH1-205ENST00000418258 IGKV1-33P01594 117 aa9.59□□□□□ -0.87
PTCH1-205ENST00000418258 GCSAMLQ5JQS6 135 aa9.59□□□□□ -0.87
PTCH1-205ENST00000418258 SIGLEC12Q96PQ1 595 aa9.59□□□□□ -0.87
PTCH1-205ENST00000418258 TRGC1P0CF51 173 aa9.59□□□□□ -0.87
PTCH1-205ENST00000418258 GLIPR1P48060 266 aa9.59□□□□□ -0.87
PTCH1-205ENST00000418258 C10orf111Q8N326 155 aa9.59□□□□□ -0.87
PTCH1-205ENST00000418258 TMEM222Q9H0R3 208 aa9.59□□□□□ -0.87
PTCH1-205ENST00000418258 WNT5BQ9H1J7 359 aa9.59□□□□□ -0.87
PTCH1-205ENST00000418258 CDC42EP3Q9UKI2 254 aa9.59□□□□□ -0.87
PTCH1-205ENST00000418258 LHFPL6Q9Y693 200 aa9.59□□□□□ -0.87
PTCH1-205ENST00000418258 A0A0G2JLM5 398 aa9.59□□□□□ -0.87
PTCH1-205ENST00000418258 ZNF729A6NN14 1252 aaPredicted RBP9.59□□□□□ -0.87
PTCH1-205ENST00000418258 H3BTX0 84 aa9.59□□□□□ -0.87
PTCH1-205ENST00000418258 CYB561D1Q8N8Q1 229 aa9.59□□□□□ -0.87
PTCH1-205ENST00000418258 C2orf88Q9BSF0 95 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms