RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 IGHV3-11P01762 117 aa11.87□□□□□ -0.51
NUP50-204ENST00000417702 FCGR2CP31995 323 aa11.87□□□□□ -0.51
NUP50-204ENST00000417702 TAS2R20P59543 309 aa11.87□□□□□ -0.51
NUP50-204ENST00000417702 DCTN2Q13561 401 aaKnown RBP11.87□□□□□ -0.51
NUP50-204ENST00000417702 PRSS8Q16651 343 aa11.87□□□□□ -0.51
NUP50-204ENST00000417702 POC5Q8NA72 575 aa11.87□□□□□ -0.51
NUP50-204ENST00000417702 OR5T1Q8NG75 326 aa11.87□□□□□ -0.51
NUP50-204ENST00000417702 PHB2Q99623 299 aa11.87□□□□□ -0.51
NUP50-204ENST00000417702 ALX4Q9H161 411 aaPredicted RBP11.87□□□□□ -0.51
NUP50-204ENST00000417702 IFT46Q9NQC8 304 aa11.87□□□□□ -0.51
NUP50-204ENST00000417702 CEPT1Q9Y6K0 416 aa11.87□□□□□ -0.51
NUP50-204ENST00000417702 FAM25AB3EWG3 89 aa11.86□□□□□ -0.51
NUP50-204ENST00000417702 FAM25CB3EWG5 89 aa11.86□□□□□ -0.51
NUP50-204ENST00000417702 FAM25GB3EWG6 89 aa11.86□□□□□ -0.51
NUP50-204ENST00000417702 H3BMQ9 156 aa11.86□□□□□ -0.51
NUP50-204ENST00000417702 HPGDSO60760 199 aa11.86□□□□□ -0.51
NUP50-204ENST00000417702 ACTL6BO94805 426 aa11.86□□□□□ -0.51
NUP50-204ENST00000417702 IGLV2-14P01704 120 aa11.86□□□□□ -0.51
NUP50-204ENST00000417702 EIF4EP06730 217 aaKnown RBP11.86□□□□□ -0.51
NUP50-204ENST00000417702 FCER2P06734 321 aa11.86□□□□□ -0.51
NUP50-204ENST00000417702 PTHLHP12272 177 aa11.86□□□□□ -0.51
NUP50-204ENST00000417702 SSBP2P81877 361 aaPredicted RBP11.86□□□□□ -0.51
NUP50-204ENST00000417702 TNXAQ16473 311 aa11.86□□□□□ -0.51
NUP50-204ENST00000417702 OR2B11Q5JQS5 317 aa11.86□□□□□ -0.51
NUP50-204ENST00000417702 ASPHD1Q5U4P2 390 aa11.86□□□□□ -0.51
NUP50-204ENST00000417702 IDO2Q6ZQW0 420 aa11.86□□□□□ -0.51
NUP50-204ENST00000417702 OVCH2Q7RTZ1 564 aa11.86□□□□□ -0.51
NUP50-204ENST00000417702 OR4S2Q8NH73 311 aa11.86□□□□□ -0.51
NUP50-204ENST00000417702 TCTEX1D2Q8WW35 142 aa11.86□□□□□ -0.51
NUP50-204ENST00000417702 DCUN1D4Q92564 292 aa11.86□□□□□ -0.51
NUP50-204ENST00000417702 RHOVQ96L33 236 aa11.86□□□□□ -0.51
NUP50-204ENST00000417702 CCDC59Q9P031 241 aaKnown RBP11.86□□□□□ -0.51
NUP50-204ENST00000417702 SORL1Q92673 2214 aa11.85□□□□□ -0.51
NUP50-204ENST00000417702 A0A0G2JLM5 398 aa11.85□□□□□ -0.51
NUP50-204ENST00000417702 C13orf42A0A1B0GVH6 325 aa11.85□□□□□ -0.51
NUP50-204ENST00000417702 MSGN1A6NI15 193 aa11.85□□□□□ -0.51
NUP50-204ENST00000417702 OVOL1O14753 267 aa11.85□□□□□ -0.51
NUP50-204ENST00000417702 PPYP01298 95 aa11.85□□□□□ -0.51
NUP50-204ENST00000417702 HSPB1P04792 205 aaKnown RBP11.85□□□□□ -0.51
NUP50-204ENST00000417702 SAA1P0DJI8 122 aaPredicted RBP11.85□□□□□ -0.51
NUP50-204ENST00000417702 ELK1P19419 428 aa11.85□□□□□ -0.51
NUP50-204ENST00000417702 AADACP22760 399 aa11.85□□□□□ -0.51
NUP50-204ENST00000417702 ECI1P42126 302 aa11.85□□□□□ -0.51
NUP50-204ENST00000417702 INSL3P51460 131 aa11.85□□□□□ -0.51
NUP50-204ENST00000417702 RPL30P62888 115 aaKnown RBP11.85□□□□□ -0.51
NUP50-204ENST00000417702 CDK10Q15131 360 aa11.85□□□□□ -0.51
NUP50-204ENST00000417702 ZNF66Q6ZN08 573 aa11.85□□□□□ -0.51
NUP50-204ENST00000417702 MFSD4AQ8N468 514 aa11.85□□□□□ -0.51
NUP50-204ENST00000417702 OR5AP2Q8NGF4 316 aa11.85□□□□□ -0.51
NUP50-204ENST00000417702 DYNC2LI1Q8TCX1 351 aa11.85□□□□□ -0.51
NUP50-204ENST00000417702 SECTM1Q8WVN6 248 aa11.85□□□□□ -0.51
NUP50-204ENST00000417702 TAS2R8Q9NYW2 309 aa11.85□□□□□ -0.51
NUP50-204ENST00000417702 IGHV4OR15-8A0A075B7B6 117 aa11.84□□□□□ -0.51
NUP50-204ENST00000417702 A0A087WW49 117 aa11.84□□□□□ -0.51
NUP50-204ENST00000417702 MEIS3P1A6NDR6 274 aa11.84□□□□□ -0.51
NUP50-204ENST00000417702 MPPED1O15442 326 aa11.84□□□□□ -0.51
NUP50-204ENST00000417702 PRSS3P35030 304 aa11.84□□□□□ -0.51
NUP50-204ENST00000417702 KIR2DS2P43631 304 aa11.84□□□□□ -0.51
NUP50-204ENST00000417702 SLURP1P55000 103 aa11.84□□□□□ -0.51
NUP50-204ENST00000417702 MSMO1Q15800 293 aa11.84□□□□□ -0.51
NUP50-204ENST00000417702 MMD2Q8IY49 270 aa11.84□□□□□ -0.51
NUP50-204ENST00000417702 ZBTB34Q8NCN2 500 aa11.84□□□□□ -0.51
NUP50-204ENST00000417702 VSTM2AQ8TAG5 236 aa11.84□□□□□ -0.51
NUP50-204ENST00000417702 SRSF12Q8WXF0 261 aaKnown RBP11.84□□□□□ -0.51
NUP50-204ENST00000417702 DLX4Q92988 240 aaPredicted RBP11.84□□□□□ -0.51
NUP50-204ENST00000417702 SLC5A7Q9GZV3 580 aa11.84□□□□□ -0.51
NUP50-204ENST00000417702 CCL28Q9NRJ3 127 aa11.84□□□□□ -0.51
NUP50-204ENST00000417702 COA4Q9NYJ1 87 aa11.84□□□□□ -0.51
NUP50-204ENST00000417702 ADAM30Q9UKF2 790 aa11.84□□□□□ -0.51
NUP50-204ENST00000417702 RGS5O15539 181 aa11.83□□□□□ -0.52
NUP50-204ENST00000417702 FXYD4P59646 89 aa11.83□□□□□ -0.52
NUP50-204ENST00000417702 EIF4EBP1Q13541 118 aaPredicted RBP11.83□□□□□ -0.52
NUP50-204ENST00000417702 MRGPRG-AS1Q2M3A8 158 aa11.83□□□□□ -0.52
NUP50-204ENST00000417702 ZNF429Q86V71 674 aa11.83□□□□□ -0.52
NUP50-204ENST00000417702 GIMAP1Q8WWP7 306 aa11.83□□□□□ -0.52
NUP50-204ENST00000417702 SNAPC3Q92966 411 aa11.83□□□□□ -0.52
NUP50-204ENST00000417702 SPIN2AQ99865 258 aa11.83□□□□□ -0.52
NUP50-204ENST00000417702 SPIN2BQ9BPZ2 258 aa11.83□□□□□ -0.52
NUP50-204ENST00000417702 TINAGL1Q9GZM7 467 aaPredicted RBP11.83□□□□□ -0.52
NUP50-204ENST00000417702 ZNF430Q9H8G1 570 aaPredicted RBP11.83□□□□□ -0.52
NUP50-204ENST00000417702 RANGRFQ9HD47 186 aaPredicted RBP11.83□□□□□ -0.52
NUP50-204ENST00000417702 EXTL2Q9UBQ6 330 aa11.83□□□□□ -0.52
NUP50-204ENST00000417702 RSL24D1Q9UHA3 163 aaKnown RBP11.83□□□□□ -0.52
NUP50-204ENST00000417702 TNFSF12O43508 249 aa11.82□□□□□ -0.52
NUP50-204ENST00000417702 SAP30O75446 220 aa11.82□□□□□ -0.52
NUP50-204ENST00000417702 OR2A4O95047 310 aa11.82□□□□□ -0.52
NUP50-204ENST00000417702 BRI3O95415 125 aa11.82□□□□□ -0.52
NUP50-204ENST00000417702 HRASP01112 189 aa11.82□□□□□ -0.52
NUP50-204ENST00000417702 OR9G9P0C7N8 305 aa11.82□□□□□ -0.52
NUP50-204ENST00000417702 APELAP0DMC3 54 aa11.82□□□□□ -0.52
NUP50-204ENST00000417702 HERV-K104P61576 105 aa11.82□□□□□ -0.52
NUP50-204ENST00000417702 CATR1Q13166 79 aa11.82□□□□□ -0.52
NUP50-204ENST00000417702 C15orf40Q8WUR7 153 aa11.82□□□□□ -0.52
NUP50-204ENST00000417702 OR2A7Q96R45 310 aa11.82□□□□□ -0.52
NUP50-204ENST00000417702 EHFQ9NZC4 300 aa11.82□□□□□ -0.52
NUP50-204ENST00000417702 ZNF701M0R085 212 aaPredicted RBP11.81□□□□□ -0.52
NUP50-204ENST00000417702 TPPPO94811 219 aa11.81□□□□□ -0.52
NUP50-204ENST00000417702 ZP3P21754 424 aa11.81□□□□□ -0.52
NUP50-204ENST00000417702 TAS2R46P59540 309 aa11.81□□□□□ -0.52
NUP50-204ENST00000417702 TMEM17Q86X19 198 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms