RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 RTN4RL2Q86UN3 420 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 MSRB3Q8IXL7 192 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 PIANPQ8IYJ0 282 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 BOD1L2Q8IYS8 172 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 RAB42Q8N4Z0 105 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 FER1L6-AS1Q8NA97 138 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 OR9K2Q8NGE7 335 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 OR52I1Q8NGK6 324 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 VN1R17PQ8TDU5 208 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 SPRYD4Q8WW59 207 aaPredicted RBP4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 PTH2Q96A98 100 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 PPCDCQ96CD2 204 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 IMP4Q96G21 291 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 C5orf30Q96GV9 206 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 FEVQ99581 238 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 GPA33Q99795 319 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 TSSK6Q9BXA6 273 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 RTN4RQ9BZR6 473 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 NMES1Q9C002 83 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 OR11A1Q9GZK7 315 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 TMEM231Q9H6L2 316 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 GEMIN7Q9H840 131 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 MRPL16Q9NX20 251 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 SPANXCQ9NY87 97 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 ZNF319Q9P2F9 582 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 TRAPPC2LQ9UL33 140 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 ETV7Q9Y603 341 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 CHCHD2Q9Y6H1 151 aaPredicted RBP4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 LYSTQ99698 3801 aa4.53□□□□□ -1.68
ECHDC1-206ENST00000417628 LOC100509620A0A075B734 347 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 A0A1W2PPV9 198 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 IGLC7A0M8Q6 106 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 FBLL1A6NHQ2 334 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 FTCDNL1E5RQL4 147 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 K7EQM0 130 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 DCTN6O00399 190 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 NDUFA7O95182 113 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 FSHBP01225 129 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 CXCL1P09341 107 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 SEC11BP0C7V7 166 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 PSG2P11465 335 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 PGCP20142 388 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 SAT1P21673 171 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 ATP6V0CP27449 155 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 HTR1FP30939 366 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 KDELR2P33947 212 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 LPAR6P43657 344 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 LHX2P50458 406 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 DYNLT1P63172 113 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 GUSBP1Q15486 140 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 PCK2Q16822 640 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 IAH1Q2TAA2 248 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 ZNF585BQ52M93 769 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 IFI44LQ53G44 452 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 SOHLH1Q5JUK2 328 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 C6orf136Q5SQH8 315 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 PHYHD1Q5SRE7 291 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 SERTAD4-AS1Q5TG53 156 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 RAET1LQ5VY80 246 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 GTF2H5Q6ZYL4 71 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 MUC20Q8N307 709 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 TCEANCQ8N8B7 351 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 TMEM116Q8NCL8 245 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 OR5A1Q8NGJ0 315 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 OR4X1Q8NH49 305 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 GPR148Q8TDV2 347 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 SECTM1Q8WVN6 248 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 TMED6Q8WW62 240 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 FCAMRQ8WWV6 532 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 DYRK2Q92630 601 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 APH1AQ96BI3 265 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 GALMQ96C23 342 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 SLAMF6Q96DU3 332 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 TVP23CQ96ET8 276 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 GPR82Q96P67 336 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 SLC25A51Q9H1U9 297 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 TUBB1Q9H4B7 451 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 AMBNQ9NP70 447 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 TMEM106BQ9NUM4 274 aa4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 MRM2Q9UI43 246 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-206ENST00000417628 IGLV3-16A0A075B6K0 115 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 IGKV1-8A0A0C4DH67 115 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 A0A1W2PR80 420 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 C9JQL5 133 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 J3QLI3 93 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 SIRPB1O00241 398 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 XKRYO14609 159 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 ADAM20O43506 726 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 TRAF3IP2O43734 574 aaPredicted RBP4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 ARL6IP5O75915 188 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 NUDT3O95989 172 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 HLA-DRB1P01911 266 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 REG1AP05451 166 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 CRYGBP07316 175 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 IGLC1P0CG04 106 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 IGLC2P0DOY2 106 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 IGLC3P0DOY3 106 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 ERGP11308 486 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 GNB3P16520 340 aa4.51□□□□□ -1.69
ECHDC1-206ENST00000417628 ZNF708P17019 499 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms