RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 LOXL3P58215 753 aa13.28□□□□□ -0.28
PHRF1-203ENST00000416188 Q96M66 194 aa13.28□□□□□ -0.28
PHRF1-203ENST00000416188 METTL1Q9UBP6 276 aaKnown RBP13.28□□□□□ -0.28
PHRF1-203ENST00000416188 MTCL1Q9Y4B5 1905 aaKnown RBP13.28□□□□□ -0.28
PHRF1-203ENST00000416188 THY1P04216 161 aa13.28□□□□□ -0.28
PHRF1-203ENST00000416188 LRRC75BQ2VPJ9 315 aa13.28□□□□□ -0.28
PHRF1-203ENST00000416188 SCGB1D4Q6XE38 83 aa13.28□□□□□ -0.28
PHRF1-203ENST00000416188 DCTN5Q9BTE1 182 aa13.28□□□□□ -0.28
PHRF1-203ENST00000416188 CBLN4Q9NTU7 201 aa13.28□□□□□ -0.28
PHRF1-203ENST00000416188 A0A087X0M5 115 aa13.28□□□□□ -0.28
PHRF1-203ENST00000416188 A0A1B0GX30 115 aa13.28□□□□□ -0.28
PHRF1-203ENST00000416188 CORTO00230 105 aa13.28□□□□□ -0.28
PHRF1-203ENST00000416188 SS18L1O75177 396 aaPredicted RBP13.28□□□□□ -0.28
PHRF1-203ENST00000416188 APCSP02743 223 aa13.28□□□□□ -0.28
PHRF1-203ENST00000416188 IZUMO4Q1ZYL8 232 aa13.28□□□□□ -0.28
PHRF1-203ENST00000416188 MAP1LC3CQ9BXW4 147 aa13.28□□□□□ -0.28
PHRF1-203ENST00000416188 MRPL37Q9BZE1 423 aaKnown RBP13.28□□□□□ -0.28
PHRF1-203ENST00000416188 C5orf66Q9H5L9 145 aa13.28□□□□□ -0.28
PHRF1-203ENST00000416188 CACNA1DQ01668 2161 aa13.28□□□□□ -0.28
PHRF1-203ENST00000416188 DHRS7CA6NNS2 312 aa13.28□□□□□ -0.28
PHRF1-203ENST00000416188 EIF3GO75821 320 aaKnown RBP eCLIP13.28□□□□□ -0.28
PHRF1-203ENST00000416188 PPOXP50336 477 aa13.28□□□□□ -0.28
PHRF1-203ENST00000416188 Q5BKY6 102 aa13.28□□□□□ -0.28
PHRF1-203ENST00000416188 Q6ZS92 163 aa13.28□□□□□ -0.28
PHRF1-203ENST00000416188 C7orf69Q9H7B7 122 aa13.28□□□□□ -0.28
PHRF1-203ENST00000416188 IL36RNQ9UBH0 155 aa13.28□□□□□ -0.28
PHRF1-203ENST00000416188 ABCA4P78363 2273 aa13.28□□□□□ -0.28
PHRF1-203ENST00000416188 SLC25A17O43808 307 aa13.27□□□□□ -0.28
PHRF1-203ENST00000416188 CRYBA2P53672 197 aa13.27□□□□□ -0.28
PHRF1-203ENST00000416188 PAFAH1B2P68402 229 aa13.27□□□□□ -0.28
PHRF1-203ENST00000416188 GBGT1Q8N5D6 347 aa13.27□□□□□ -0.28
PHRF1-203ENST00000416188 MIC13Q5XKP0 118 aa13.27□□□□□ -0.28
PHRF1-203ENST00000416188 DHRS11Q6UWP2 260 aa13.27□□□□□ -0.28
PHRF1-203ENST00000416188 OR4A5Q8NH83 315 aa13.27□□□□□ -0.28
PHRF1-203ENST00000416188 SDHCQ99643 169 aaPredicted RBP13.27□□□□□ -0.28
PHRF1-203ENST00000416188 NPIPB9F8W1W9 429 aa13.27□□□□□ -0.29
PHRF1-203ENST00000416188 ZNF735P0CB33 412 aa13.27□□□□□ -0.29
PHRF1-203ENST00000416188 GLIPR1P48060 266 aa13.27□□□□□ -0.29
PHRF1-203ENST00000416188 H2BFSP57053 126 aa13.27□□□□□ -0.29
PHRF1-203ENST00000416188 SPANXN1Q5VSR9 72 aa13.27□□□□□ -0.29
PHRF1-203ENST00000416188 PUSL1Q8N0Z8 303 aaKnown RBP13.27□□□□□ -0.29
PHRF1-203ENST00000416188 OR52M1Q8NGK5 317 aa13.27□□□□□ -0.29
PHRF1-203ENST00000416188 OR4C12Q96R67 309 aa13.27□□□□□ -0.29
PHRF1-203ENST00000416188 OR8A1Q8NGG7 326 aa13.27□□□□□ -0.29
PHRF1-203ENST00000416188 TAF15Q92804 592 aaKnown RBP eCLIP13.27□□□□□ -0.296e-6■■□□□ 12.5
PHRF1-203ENST00000416188 MEGF10Q96KG7 1140 aa13.27□□□□□ -0.29
PHRF1-203ENST00000416188 HKR1P10072 659 aa13.26□□□□□ -0.29
PHRF1-203ENST00000416188 TIMP3P35625 211 aa13.26□□□□□ -0.29
PHRF1-203ENST00000416188 MMD2Q8IY49 270 aa13.26□□□□□ -0.29
PHRF1-203ENST00000416188 EIF4E3Q8N5X7 224 aaKnown RBP13.26□□□□□ -0.29
PHRF1-203ENST00000416188 NPIPB13A6NJU9 1138 aa13.26□□□□□ -0.29
PHRF1-203ENST00000416188 NPIPB4C9JG80 1138 aa13.26□□□□□ -0.29
PHRF1-203ENST00000416188 MPDU1O75352 247 aa13.26□□□□□ -0.29
PHRF1-203ENST00000416188 TFPI2P48307 235 aa13.26□□□□□ -0.29
PHRF1-203ENST00000416188 HOXA4Q00056 320 aaPredicted RBP13.26□□□□□ -0.29
PHRF1-203ENST00000416188 Q0VFX4 171 aa13.26□□□□□ -0.29
PHRF1-203ENST00000416188 WDFY1Q8IWB7 410 aa13.26□□□□□ -0.29
PHRF1-203ENST00000416188 ZMAT5Q9UDW3 170 aaKnown RBP13.26□□□□□ -0.29
PHRF1-203ENST00000416188 RND2P52198 227 aa13.26□□□□□ -0.29
PHRF1-203ENST00000416188 MEF2BQ02080 365 aaPredicted RBP13.26□□□□□ -0.29
PHRF1-203ENST00000416188 SSBP3Q9BWW4 388 aaPredicted RBP13.26□□□□□ -0.29
PHRF1-203ENST00000416188 VWA8A3KMH1 1905 aa13.26□□□□□ -0.29
PHRF1-203ENST00000416188 TBX6O95947 436 aaPredicted RBP13.26□□□□□ -0.29
PHRF1-203ENST00000416188 SSTR5P35346 364 aa13.26□□□□□ -0.29
PHRF1-203ENST00000416188 SELENOHQ8IZQ5 122 aaKnown RBP13.26□□□□□ -0.29
PHRF1-203ENST00000416188 TMEM14DPA8MWL7 114 aa13.26□□□□□ -0.29
PHRF1-203ENST00000416188 PF4P02776 101 aa13.26□□□□□ -0.29
PHRF1-203ENST00000416188 PNKDQ8N490 385 aa13.26□□□□□ -0.29
PHRF1-203ENST00000416188 SMDT1Q9H4I9 107 aa13.26□□□□□ -0.29
PHRF1-203ENST00000416188 POLEQ07864 2286 aa13.25□□□□□ -0.29
PHRF1-203ENST00000416188 KLK2P20151 261 aa13.25□□□□□ -0.29
PHRF1-203ENST00000416188 SELENOTP62341 195 aa13.25□□□□□ -0.29
PHRF1-203ENST00000416188 CENPVQ7Z7K6 275 aaPredicted RBP13.25□□□□□ -0.29
PHRF1-203ENST00000416188 IDI2-AS1Q9NZ38 188 aa13.25□□□□□ -0.29
PHRF1-203ENST00000416188 MARCH11A6NNE9 402 aa13.25□□□□□ -0.29
PHRF1-203ENST00000416188 M0R143 59 aa13.25□□□□□ -0.29
PHRF1-203ENST00000416188 CALHM1Q8IU99 346 aa13.25□□□□□ -0.29
PHRF1-203ENST00000416188 SLC25A33Q9BSK2 321 aa13.25□□□□□ -0.29
PHRF1-203ENST00000416188 SHISA3A0PJX4 238 aa13.25□□□□□ -0.29
PHRF1-203ENST00000416188 IGHMP01871 453 aa13.25□□□□□ -0.29
PHRF1-203ENST00000416188 PCSK4Q6UW60 755 aa13.25□□□□□ -0.29
PHRF1-203ENST00000416188 ABHD12Q8N2K0 398 aa13.25□□□□□ -0.29
PHRF1-203ENST00000416188 PAM16Q9Y3D7 125 aa13.25□□□□□ -0.29
PHRF1-203ENST00000416188 VN1R17PQ8TDU5 208 aa13.25□□□□□ -0.29
PHRF1-203ENST00000416188 CHD5Q8TDI0 1954 aa13.25□□□□□ -0.29
PHRF1-203ENST00000416188 ZNF383Q8NA42 475 aa13.24□□□□□ -0.29
PHRF1-203ENST00000416188 FOXF2Q12947 444 aa13.24□□□□□ -0.29
PHRF1-203ENST00000416188 SEMA5BQ9P283 1151 aa13.24□□□□□ -0.29
PHRF1-203ENST00000416188 ADAM11O75078 769 aa13.24□□□□□ -0.29
PHRF1-203ENST00000416188 OR2A4O95047 310 aa13.24□□□□□ -0.29
PHRF1-203ENST00000416188 S1PR2O95136 353 aa13.24□□□□□ -0.29
PHRF1-203ENST00000416188 IL18BPO95998 194 aa13.24□□□□□ -0.29
PHRF1-203ENST00000416188 HSPE1P61604 102 aaKnown RBP13.24□□□□□ -0.29
PHRF1-203ENST00000416188 ZNF818PQ6ZRF7 136 aa13.24□□□□□ -0.29
PHRF1-203ENST00000416188 SAXO1Q8IYX7 474 aa13.24□□□□□ -0.29
PHRF1-203ENST00000416188 OR2A7Q96R45 310 aa13.24□□□□□ -0.29
PHRF1-203ENST00000416188 PGPA6NDG6 321 aa13.24□□□□□ -0.29
PHRF1-203ENST00000416188 CLEC7AQ9BXN2 247 aa13.24□□□□□ -0.29
PHRF1-203ENST00000416188 AP5S1Q9NUS5 200 aa13.24□□□□□ -0.29
PHRF1-203ENST00000416188 C17orf100A8MU93 164 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms