RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 SRP19P09132 144 aaKnown RBP11.03□□□□□ -0.64
SCN1B-202ENST00000415950 PAFAH1B2P68402 229 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 FBXW9Q5XUX1 488 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 FLVCR1-AS1Q8TAF5 88 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 RCC1LQ96I51 464 aaKnown RBP11.03□□□□□ -0.64
SCN1B-202ENST00000415950 NEU1Q99519 415 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 CCL13Q99616 98 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 CRISPLD2Q9H0B8 497 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 PGPA6NDG6 321 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 CGB1A6NKQ9 187 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 ZNF729A6NN14 1252 aaPredicted RBP11.03□□□□□ -0.64
SCN1B-202ENST00000415950 ZG16O60844 167 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 OIT3Q8WWZ8 545 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 PARD6GQ9BYG4 376 aaPredicted RBP11.03□□□□□ -0.64
SCN1B-202ENST00000415950 E9PQ18 207 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 M0R296 226 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 GCSHP23434 173 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 CRYBB3P26998 211 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 VKORC1L1Q8N0U8 176 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 IMMP2LQ96T52 175 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 A8MWL6 223 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 M0R3E3 92 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 CBLN1P23435 193 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 FGF12P61328 243 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 SPANXN1Q5VSR9 72 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 WDR74Q6RFH5 385 aaPredicted RBP11.03□□□□□ -0.64
SCN1B-202ENST00000415950 ABHD12Q8N2K0 398 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 ARFGEF3Q5TH69 2177 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 PRR14LQ5THK1 2151 aa11.03□□□□□ -0.64
SCN1B-202ENST00000415950 RALGAPA2Q2PPJ7 1873 aa11.02□□□□□ -0.64
SCN1B-202ENST00000415950 DNPH1O43598 174 aa11.02□□□□□ -0.64
SCN1B-202ENST00000415950 HIST1H2BKO60814 126 aa11.02□□□□□ -0.64
SCN1B-202ENST00000415950 LEPROTL1O95214 131 aa11.02□□□□□ -0.64
SCN1B-202ENST00000415950 OR2H2O95918 312 aa11.02□□□□□ -0.64
SCN1B-202ENST00000415950 GCGP01275 180 aa11.02□□□□□ -0.64
SCN1B-202ENST00000415950 HIST1H2BJP06899 126 aa11.02□□□□□ -0.64
SCN1B-202ENST00000415950 HOXA5P20719 270 aa11.02□□□□□ -0.64
SCN1B-202ENST00000415950 HIST1H2BOP23527 126 aa11.02□□□□□ -0.64
SCN1B-202ENST00000415950 HIST1H2BBP33778 126 aa11.02□□□□□ -0.64
SCN1B-202ENST00000415950 CEACAM3P40198 252 aa11.02□□□□□ -0.64
SCN1B-202ENST00000415950 GFRA1P56159 465 aa11.02□□□□□ -0.64
SCN1B-202ENST00000415950 HIST1H2BDP58876 126 aa11.02□□□□□ -0.64
SCN1B-202ENST00000415950 HIST1H2BCP62807 126 aa11.02□□□□□ -0.64
SCN1B-202ENST00000415950 HIST2H2BEQ16778 126 aa11.02□□□□□ -0.64
SCN1B-202ENST00000415950 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.02□□□□□ -0.64
SCN1B-202ENST00000415950 BHLHA15Q7RTS1 189 aaPredicted RBP11.02□□□□□ -0.64
SCN1B-202ENST00000415950 OR8B3Q8NGG8 313 aa11.02□□□□□ -0.64
SCN1B-202ENST00000415950 HIST1H2BHQ93079 126 aa11.02□□□□□ -0.64
SCN1B-202ENST00000415950 MARS2Q96GW9 593 aaKnown RBP11.02□□□□□ -0.64
SCN1B-202ENST00000415950 HIST1H2BNQ99877 126 aa11.02□□□□□ -0.64
SCN1B-202ENST00000415950 HIST1H2BMQ99879 126 aa11.02□□□□□ -0.64
SCN1B-202ENST00000415950 H0Y980 276 aa11.02□□□□□ -0.65
SCN1B-202ENST00000415950 CXCL1P09341 107 aa11.02□□□□□ -0.65
SCN1B-202ENST00000415950 CD33P20138 364 aa11.02□□□□□ -0.65
SCN1B-202ENST00000415950 BTF3P20290 206 aaKnown RBP11.02□□□□□ -0.65
SCN1B-202ENST00000415950 LGALS7P47929 136 aa11.02□□□□□ -0.65
SCN1B-202ENST00000415950 C1orf53Q5VUE5 145 aa11.02□□□□□ -0.65
SCN1B-202ENST00000415950 CARFQ8N187 725 aa11.02□□□□□ -0.65
SCN1B-202ENST00000415950 GLRX2Q9NS18 164 aa11.02□□□□□ -0.65
SCN1B-202ENST00000415950 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.02□□□□□ -0.65
SCN1B-202ENST00000415950 F8VVB4 439 aa11.02□□□□□ -0.65
SCN1B-202ENST00000415950 F8VWA3 439 aa11.02□□□□□ -0.65
SCN1B-202ENST00000415950 FOXA3P55318 350 aaPredicted RBP11.02□□□□□ -0.65
SCN1B-202ENST00000415950 IGLV3-21P80748 117 aaPredicted RBP11.02□□□□□ -0.65
SCN1B-202ENST00000415950 HOXA4Q00056 320 aaPredicted RBP11.02□□□□□ -0.65
SCN1B-202ENST00000415950 ZBTB34Q8NCN2 500 aa11.02□□□□□ -0.65
SCN1B-202ENST00000415950 RABAC1Q9UI14 185 aa11.02□□□□□ -0.65
SCN1B-202ENST00000415950 RALYQ9UKM9 306 aaKnown RBP11.02□□□□□ -0.65
SCN1B-202ENST00000415950 CEACAM21Q3KPI0 293 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 PYY3Q5JQD4 70 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 PGPEP1LA6NFU8 196 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 HYPMO75409 117 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 CD82P27701 267 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 PLP1P60201 277 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 CTAG1AP78358 180 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 ECSCRQ19T08 205 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 LYRM7Q5U5X0 104 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 ERASQ7Z444 233 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 GBGT1Q8N5D6 347 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 MYOZ3Q8TDC0 251 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 WIPI2Q9Y4P8 454 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 IGHV3-35A0A0C4DH35 117 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 CEACAM18A8MTB9 384 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 SNCGO76070 127 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 NUBP1P53384 320 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 STXBP6Q8NFX7 210 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 RAB1CQ92928 201 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 PGLYRP4Q96LB8 373 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 SRXN1Q9BYN0 137 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 F11RQ9Y624 299 aaKnown RBP11.01□□□□□ -0.65
SCN1B-202ENST00000415950 C5orf67F2Z3F1 127 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 KLF7O75840 302 aaPredicted RBP11.01□□□□□ -0.65
SCN1B-202ENST00000415950 REC114Q7Z4M0 266 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 OR51G1Q8NGK1 321 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 GRAMD2BQ96HH9 432 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 DLL3Q9NYJ7 618 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 UQCR10Q9UDW1 63 aa11.01□□□□□ -0.65
SCN1B-202ENST00000415950 ARL14EPLP0DKL9 152 aa11□□□□□ -0.65
SCN1B-202ENST00000415950 MAFAQ8NHW3 353 aaPredicted RBP11□□□□□ -0.65
SCN1B-202ENST00000415950 IGKV1D-13A0A0B4J2D9 117 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms