RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 TRIM16LQ309B1 348 aa10.86□□□□□ -0.67
CPNE1-209ENST00000415920 PLET1Q6UQ28 207 aa10.86□□□□□ -0.67
CPNE1-209ENST00000415920 SGPP2Q8IWX5 399 aa10.86□□□□□ -0.67
CPNE1-209ENST00000415920 TMEM86BQ8N661 226 aa10.86□□□□□ -0.67
CPNE1-209ENST00000415920 OR4C13Q8NGP0 309 aa10.86□□□□□ -0.67
CPNE1-209ENST00000415920 PIFOQ8TCI5 191 aa10.86□□□□□ -0.67
CPNE1-209ENST00000415920 FLYWCH2Q96CP2 140 aaKnown RBP10.86□□□□□ -0.67
CPNE1-209ENST00000415920 KIAA1456Q9P272 454 aa10.86□□□□□ -0.67
CPNE1-209ENST00000415920 MOB4Q9Y3A3 225 aa10.86□□□□□ -0.67
CPNE1-209ENST00000415920 NCBP2LA6PVI3 153 aaKnown RBP10.85□□□□□ -0.67
CPNE1-209ENST00000415920 CHST1O43916 411 aa10.85□□□□□ -0.67
CPNE1-209ENST00000415920 GPR137BO60478 399 aa10.85□□□□□ -0.67
CPNE1-209ENST00000415920 OR2F2O95006 317 aa10.85□□□□□ -0.67
CPNE1-209ENST00000415920 HLA-AP01891 365 aaKnown RBP10.85□□□□□ -0.67
CPNE1-209ENST00000415920 SERPINE2P07093 398 aa10.85□□□□□ -0.67
CPNE1-209ENST00000415920 H2AFB2P0C5Z0 115 aa10.85□□□□□ -0.67
CPNE1-209ENST00000415920 ANXA3P12429 323 aa10.85□□□□□ -0.67
CPNE1-209ENST00000415920 SPNP16150 400 aa10.85□□□□□ -0.67
CPNE1-209ENST00000415920 PPP1R1AQ13522 171 aa10.85□□□□□ -0.67
CPNE1-209ENST00000415920 PLGLAQ15195 96 aa10.85□□□□□ -0.67
CPNE1-209ENST00000415920 SP6Q3SY56 376 aa10.85□□□□□ -0.67
CPNE1-209ENST00000415920 C4orf46Q504U0 113 aa10.85□□□□□ -0.67
CPNE1-209ENST00000415920 C11orf88Q6PI97 169 aa10.85□□□□□ -0.67
CPNE1-209ENST00000415920 CCBE1Q6UXH8 406 aaPredicted RBP10.85□□□□□ -0.67
CPNE1-209ENST00000415920 LIAT1Q6ZQX7 453 aa10.85□□□□□ -0.67
CPNE1-209ENST00000415920 CASTOR1Q8WTX7 329 aa10.85□□□□□ -0.67
CPNE1-209ENST00000415920 CITED1Q99966 193 aa10.85□□□□□ -0.67
CPNE1-209ENST00000415920 PRR13Q9NZ81 148 aa10.85□□□□□ -0.67
CPNE1-209ENST00000415920 COMMD9Q9P000 198 aa10.85□□□□□ -0.67
CPNE1-209ENST00000415920 NBR2O15453 112 aa10.84□□□□□ -0.67
CPNE1-209ENST00000415920 RBFOX2O43251 390 aaKnown RBP eCLIP10.84□□□□□ -0.677e-7■□□□□ 10.1
CPNE1-209ENST00000415920 SLC25A17O43808 307 aa10.84□□□□□ -0.67
CPNE1-209ENST00000415920 OR4E1P0C645 316 aa10.84□□□□□ -0.67
CPNE1-209ENST00000415920 VSIG10L2P0DP72 767 aa10.84□□□□□ -0.67
CPNE1-209ENST00000415920 RPA2P15927 270 aa10.84□□□□□ -0.67
CPNE1-209ENST00000415920 BRWD1-AS2P59051 145 aa10.84□□□□□ -0.67
CPNE1-209ENST00000415920 ERVK-16P61578 105 aa10.84□□□□□ -0.67
CPNE1-209ENST00000415920 EBI3Q14213 229 aa10.84□□□□□ -0.67
CPNE1-209ENST00000415920 TMEM177Q53S58 311 aa10.84□□□□□ -0.67
CPNE1-209ENST00000415920 TMEM128Q5BJH2 165 aa10.84□□□□□ -0.67
CPNE1-209ENST00000415920 SSX9Q7RTT3 188 aa10.84□□□□□ -0.67
CPNE1-209ENST00000415920 SLC25A42Q86VD7 318 aa10.84□□□□□ -0.67
CPNE1-209ENST00000415920 THNSL2Q86YJ6 484 aa10.84□□□□□ -0.67
CPNE1-209ENST00000415920 C1QL4Q86Z23 238 aa10.84□□□□□ -0.67
CPNE1-209ENST00000415920 Q8N6K4 173 aa10.84□□□□□ -0.67
CPNE1-209ENST00000415920 TCTEX1D1Q8N7M0 179 aa10.84□□□□□ -0.67
CPNE1-209ENST00000415920 RNASE11Q8TAA1 199 aaKnown RBP10.84□□□□□ -0.67
CPNE1-209ENST00000415920 OSR1Q8TAX0 266 aaPredicted RBP10.84□□□□□ -0.67
CPNE1-209ENST00000415920 CD300LFQ8TDQ1 290 aa10.84□□□□□ -0.67
CPNE1-209ENST00000415920 RBM14Q96PK6 669 aaKnown RBP10.84□□□□□ -0.67
CPNE1-209ENST00000415920 TSNAXQ99598 290 aaKnown RBP10.84□□□□□ -0.67
CPNE1-209ENST00000415920 RAB18Q9NP72 206 aa10.84□□□□□ -0.67
CPNE1-209ENST00000415920 TNCP24821 2201 aa10.83□□□□□ -0.68
CPNE1-209ENST00000415920 B3GALNT1O75752 331 aa10.83□□□□□ -0.68
CPNE1-209ENST00000415920 SPDEFO95238 335 aa10.83□□□□□ -0.68
CPNE1-209ENST00000415920 HPRT1P00492 218 aa10.83□□□□□ -0.68
CPNE1-209ENST00000415920 SAA1P0DJI8 122 aaPredicted RBP10.83□□□□□ -0.68
CPNE1-209ENST00000415920 LPAR6P43657 344 aa10.83□□□□□ -0.68
CPNE1-209ENST00000415920 AKR1C2P52895 323 aa10.83□□□□□ -0.68
CPNE1-209ENST00000415920 UBE2MP61081 183 aaKnown RBP10.83□□□□□ -0.68
CPNE1-209ENST00000415920 SUPT4H1P63272 117 aaKnown RBP10.83□□□□□ -0.68
CPNE1-209ENST00000415920 VMA21Q3ZAQ7 101 aa10.83□□□□□ -0.68
CPNE1-209ENST00000415920 C16orf82Q7Z2V1 217 aa10.83□□□□□ -0.68
CPNE1-209ENST00000415920 VKORC1L1Q8N0U8 176 aa10.83□□□□□ -0.68
CPNE1-209ENST00000415920 DMBX1Q8NFW5 382 aa10.83□□□□□ -0.68
CPNE1-209ENST00000415920 OR4F5Q8NH21 305 aa10.83□□□□□ -0.68
CPNE1-209ENST00000415920 R3HDM4Q96D70 268 aa10.83□□□□□ -0.68
CPNE1-209ENST00000415920 RITA1Q96K30 269 aa10.83□□□□□ -0.68
CPNE1-209ENST00000415920 TMEM222Q9H0R3 208 aa10.83□□□□□ -0.68
CPNE1-209ENST00000415920 CLPSL1A2RUU4 121 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 SH2D7A6NKC9 451 aaPredicted RBP10.82□□□□□ -0.68
CPNE1-209ENST00000415920 MARCH11A6NNE9 402 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 NDUFA7O95182 113 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 SFT2D2O95562 160 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 TSPAN15O95858 294 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 HRASP01112 189 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 UCP1P25874 307 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 G6PCP35575 357 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 F2RL1P55085 397 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 DHODHQ02127 395 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 DHRS2Q13268 280 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 PSG5Q15238 335 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 ZNF585BQ52M93 769 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 ARSJQ5FYB0 599 aaPredicted RBP10.82□□□□□ -0.68
CPNE1-209ENST00000415920 TMEM268Q5VZI3 342 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 LYG2Q86SG7 212 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 C5orf56Q8N8D9 126 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 DUSP18Q8NEJ0 188 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 OR8H1Q8NGG4 311 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 OR52B4Q8NGK2 314 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 GALNT14Q96FL9 552 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 SEC22CQ9BRL7 303 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 FBXL15Q9H469 300 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 PLEKHA2Q9HB19 425 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 TPSG1Q9NRR2 321 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 FAM212BQ9NTI7 297 aaPredicted RBP10.82□□□□□ -0.68
CPNE1-209ENST00000415920 METTL1Q9UBP6 276 aaKnown RBP10.82□□□□□ -0.68
CPNE1-209ENST00000415920 KCNIP3Q9Y2W7 256 aa10.82□□□□□ -0.68
CPNE1-209ENST00000415920 C9orf170A2RU37 121 aa10.81□□□□□ -0.68
CPNE1-209ENST00000415920 INMT-MINDY4F8WBC2 141 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms