RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 ZIC4Q8N9L1 334 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 DEFB108BQ8NET1 73 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 OR4M1Q8NGD0 313 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 OR52L1Q8NGH7 329 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 OR52E2Q8NGJ4 325 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 OR5J2Q8NH18 312 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 GPX7Q96SL4 187 aaPredicted RBP4.61□□□□□ -1.67
EPHA4-204ENST00000415749 MAP1LC3CQ9BXW4 147 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 JPT2Q9H910 190 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 TMEM27Q9HBJ8 222 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 NOX3Q9HBY0 568 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 TNFRSF19Q9NS68 423 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 OR1A1Q9P1Q5 309 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 COMMD3Q9UBI1 195 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 NUFIP1Q9UHK0 495 aaKnown RBP4.61□□□□□ -1.67
EPHA4-204ENST00000415749 KIF25Q9UIL4 384 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 ALG5Q9Y673 324 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 PLXNB1O43157 2135 aa4.61□□□□□ -1.67
EPHA4-204ENST00000415749 DOCK11Q5JSL3 2073 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 IGKV1D-42A0A075B6H8 117 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 IGHV3OR16-10A0A075B7F0 116 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 TRAV27A0A087WT01 109 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 A0A1B0GW55 424 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 C7orf66A4D0T2 115 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 RIIAD1A6NNX1 92 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 A8MXK9 166 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 TRAPPC2LH3BP13 241 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 GSTZ1O43708 216 aaPredicted RBP4.6□□□□□ -1.67
EPHA4-204ENST00000415749 NDUFB2O95178 105 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 C1QBP02746 253 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 UCHL1P09936 223 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 DUX4L2P0CJ85 424 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 DUX4L3P0CJ86 424 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 DUX4L4P0CJ87 422 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 DUX4L5P0CJ88 424 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 DUX4L6P0CJ89 424 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 DUX4L7P0CJ90 424 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 ATF1P18846 271 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 TBPP20226 339 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 ARR3P36575 388 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 OR10A3P58181 314 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 SLC35A1P78382 337 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 CCL8P80075 99 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 CDK5R1Q15078 307 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 ZFP69Q49AA0 526 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 ZNF506Q5JVG8 444 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 FAM27D1Q5T7N8 215 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 HACD4Q5VWC8 232 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 LAMTOR1Q6IAA8 161 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 SFXN4Q6P4A7 337 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 DUX4L9Q6RFH8 374 aaPredicted RBP4.6□□□□□ -1.67
EPHA4-204ENST00000415749 NOTCH2NLQ7Z3S9 236 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 OR5H6Q8NGV6 325 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 OR2T27Q8NH04 317 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 LINC01006Q8NI28 216 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 NPRL2Q8WTW4 380 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 CREB3L1Q96BA8 519 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 RARRES2Q99969 163 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 RNF126Q9BV68 326 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 OR11A1Q9GZK7 315 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 CACYBPQ9HB71 228 aaKnown RBP4.6□□□□□ -1.67
EPHA4-204ENST00000415749 PLSCR3Q9NRY6 295 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 KCNIP1Q9NZI2 227 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 DUX4Q9UBX2 424 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 ING4Q9UNL4 249 aa4.6□□□□□ -1.67
EPHA4-204ENST00000415749 IGHV1-69-2A0A0G2JMI3 117 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 MDFIC2A0A1B0GVS7 189 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 A0A1B0GW15 77 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 DHRS7CA6NNS2 312 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 CENPBD1B2RD01 187 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 SRRM5B3KS81 715 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 J3QLW9 94 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 MRPS12O15235 138 aaKnown RBP4.59□□□□□ -1.67
EPHA4-204ENST00000415749 XRCC2O43543 280 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 TRAF3IP2O43734 574 aaPredicted RBP4.59□□□□□ -1.67
EPHA4-204ENST00000415749 GATBO75879 557 aaKnown RBP4.59□□□□□ -1.67
EPHA4-204ENST00000415749 IFNGP01579 166 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 MRPL3P09001 348 aaKnown RBP4.59□□□□□ -1.67
EPHA4-204ENST00000415749 ZNF35P13682 527 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 ZNF250P15622 560 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 HIST1H1CP16403 213 aaKnown RBP4.59□□□□□ -1.67
EPHA4-204ENST00000415749 ZNF19P17023 458 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 S100A1P23297 94 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 HTR2CP28335 458 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 ERP29P30040 261 aaKnown RBP4.59□□□□□ -1.67
EPHA4-204ENST00000415749 KIR2DS2P43631 304 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 SLC25A1P53007 311 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 HCCSP53701 268 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 RRAS2P62070 204 aaPredicted RBP4.59□□□□□ -1.67
EPHA4-204ENST00000415749 PSG3Q16557 428 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 DEFB112Q30KQ8 113 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 TMEM30BQ3MIR4 351 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 CCDC58Q4VC31 144 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 ACSM3Q53FZ2 586 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 IDNKQ5T6J7 187 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 GFI1BQ5VTD9 330 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 TRIQKQ629K1 86 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 RPL22L1Q6P5R6 122 aaKnown RBP4.59□□□□□ -1.67
EPHA4-204ENST00000415749 ARL9Q6T311 187 aa4.59□□□□□ -1.67
EPHA4-204ENST00000415749 MDP1Q86V88 176 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms