RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 EAF1Q96JC9 268 aaPredicted RBP11.43□□□□□ -0.58
SF3B1-204ENST00000414963 RITA1Q96K30 269 aa11.43□□□□□ -0.58
SF3B1-204ENST00000414963 RHOVQ96L33 236 aa11.43□□□□□ -0.58
SF3B1-204ENST00000414963 MMP24Q9Y5R2 645 aa11.43□□□□□ -0.58
SF3B1-204ENST00000414963 hCG_2014768A0A024R1R8 64 aa11.42□□□□□ -0.58
SF3B1-204ENST00000414963 MARCH11A6NNE9 402 aa11.42□□□□□ -0.58
SF3B1-204ENST00000414963 SHOXO15266 292 aa11.42□□□□□ -0.58
SF3B1-204ENST00000414963 ADAP1O75689 374 aa11.42□□□□□ -0.58
SF3B1-204ENST00000414963 IGKV1D-33P01593 117 aa11.42□□□□□ -0.58
SF3B1-204ENST00000414963 IGKV1-33P01594 117 aa11.42□□□□□ -0.58
SF3B1-204ENST00000414963 IGLV2-23P01705 113 aa11.42□□□□□ -0.58
SF3B1-204ENST00000414963 SNRNP70P08621 437 aaKnown RBP11.42□□□□□ -0.58
SF3B1-204ENST00000414963 HOXB5P09067 269 aa11.42□□□□□ -0.58
SF3B1-204ENST00000414963 SLC25A6P12236 298 aa11.42□□□□□ -0.58
SF3B1-204ENST00000414963 RPS16P62249 146 aaKnown RBP11.42□□□□□ -0.58
SF3B1-204ENST00000414963 SRSF4Q08170 494 aaKnown RBP11.42□□□□□ -0.58
SF3B1-204ENST00000414963 LRRC75BQ2VPJ9 315 aa11.42□□□□□ -0.58
SF3B1-204ENST00000414963 DEFB112Q30KQ8 113 aa11.42□□□□□ -0.58
SF3B1-204ENST00000414963 CLEC9AQ6UXN8 241 aa11.42□□□□□ -0.58
SF3B1-204ENST00000414963 NPBQ8NG41 125 aa11.42□□□□□ -0.58
SF3B1-204ENST00000414963 OR11H7Q8NGC8 314 aa11.42□□□□□ -0.58
SF3B1-204ENST00000414963 OR5M8Q8NGP6 311 aa11.42□□□□□ -0.58
SF3B1-204ENST00000414963 RRNAD1Q96FB5 475 aaKnown RBP11.42□□□□□ -0.58
SF3B1-204ENST00000414963 HARBI1Q96MB7 349 aa11.42□□□□□ -0.58
SF3B1-204ENST00000414963 TSNAXQ99598 290 aaKnown RBP11.42□□□□□ -0.58
SF3B1-204ENST00000414963 MGAT4CQ9UBM8 478 aa11.42□□□□□ -0.58
SF3B1-204ENST00000414963 NAV3Q8IVL0 2385 aa11.41□□□□□ -0.58
SF3B1-204ENST00000414963 A0A1B0GU03 582 aa11.41□□□□□ -0.58
SF3B1-204ENST00000414963 OR2A4O95047 310 aa11.41□□□□□ -0.58
SF3B1-204ENST00000414963 SPDEFO95238 335 aa11.41□□□□□ -0.58
SF3B1-204ENST00000414963 CRYGBP07316 175 aa11.41□□□□□ -0.58
SF3B1-204ENST00000414963 FGF2P09038 288 aa11.41□□□□□ -0.58
SF3B1-204ENST00000414963 CXCL3P19876 107 aa11.41□□□□□ -0.58
SF3B1-204ENST00000414963 G6PCP35575 357 aa11.41□□□□□ -0.58
SF3B1-204ENST00000414963 SRP14P37108 136 aaKnown RBP11.41□□□□□ -0.58
SF3B1-204ENST00000414963 UBE2KP61086 200 aa11.41□□□□□ -0.58
SF3B1-204ENST00000414963 ERVK-16P61578 105 aa11.41□□□□□ -0.58
SF3B1-204ENST00000414963 PUSL1Q8N0Z8 303 aaKnown RBP11.41□□□□□ -0.58
SF3B1-204ENST00000414963 TEX45Q8NA69 505 aa11.41□□□□□ -0.58
SF3B1-204ENST00000414963 OR8H1Q8NGG4 311 aa11.41□□□□□ -0.58
SF3B1-204ENST00000414963 ASB13Q8WXK3 278 aa11.41□□□□□ -0.58
SF3B1-204ENST00000414963 GPR146Q96CH1 333 aa11.41□□□□□ -0.58
SF3B1-204ENST00000414963 OR2A7Q96R45 310 aa11.41□□□□□ -0.58
SF3B1-204ENST00000414963 SSX3Q99909 188 aa11.41□□□□□ -0.58
SF3B1-204ENST00000414963 PLSCR3Q9NRY6 295 aa11.41□□□□□ -0.58
SF3B1-204ENST00000414963 COA4Q9NYJ1 87 aa11.41□□□□□ -0.58
SF3B1-204ENST00000414963 BET1LQ9NYM9 111 aa11.41□□□□□ -0.58
SF3B1-204ENST00000414963 MXRA5Q9NR99 2828 aa11.41□□□□□ -0.58
SF3B1-204ENST00000414963 A0A0G2JRQ6 117 aa11.4□□□□□ -0.58
SF3B1-204ENST00000414963 GOSR2O14653 212 aa11.4□□□□□ -0.58
SF3B1-204ENST00000414963 AKR1C2P52895 323 aa11.4□□□□□ -0.58
SF3B1-204ENST00000414963 H2BFSP57053 126 aa11.4□□□□□ -0.58
SF3B1-204ENST00000414963 SCGB2A2Q13296 93 aa11.4□□□□□ -0.58
SF3B1-204ENST00000414963 PSG5Q15238 335 aa11.4□□□□□ -0.58
SF3B1-204ENST00000414963 AARDQ4LEZ3 155 aa11.4□□□□□ -0.58
SF3B1-204ENST00000414963 OR4A47Q6IF82 309 aa11.4□□□□□ -0.58
SF3B1-204ENST00000414963 GSG1LQ6UXU4 331 aa11.4□□□□□ -0.58
SF3B1-204ENST00000414963 Q6YL49 198 aa11.4□□□□□ -0.58
SF3B1-204ENST00000414963 H2BFWTQ7Z2G1 175 aa11.4□□□□□ -0.58
SF3B1-204ENST00000414963 VKORC1L1Q8N0U8 176 aa11.4□□□□□ -0.58
SF3B1-204ENST00000414963 DMBX1Q8NFW5 382 aa11.4□□□□□ -0.58
SF3B1-204ENST00000414963 OR4A5Q8NH83 315 aa11.4□□□□□ -0.58
SF3B1-204ENST00000414963 VSTM2AQ8TAG5 236 aa11.4□□□□□ -0.58
SF3B1-204ENST00000414963 RBMXL1Q96E39 390 aaKnown RBP11.4□□□□□ -0.58
SF3B1-204ENST00000414963 C2orf50Q96LR7 162 aa11.4□□□□□ -0.58
SF3B1-204ENST00000414963 SPIN2AQ99865 258 aa11.4□□□□□ -0.58
SF3B1-204ENST00000414963 SPIN2BQ9BPZ2 258 aa11.4□□□□□ -0.58
SF3B1-204ENST00000414963 TMEM140Q9NV12 185 aa11.4□□□□□ -0.58
SF3B1-204ENST00000414963 CDC42EP3Q9UKI2 254 aa11.4□□□□□ -0.58
SF3B1-204ENST00000414963 MPTX1A8MV57 137 aa11.39□□□□□ -0.59
SF3B1-204ENST00000414963 PITX3O75364 302 aa11.39□□□□□ -0.59
SF3B1-204ENST00000414963 NDUFA3O95167 84 aa11.39□□□□□ -0.59
SF3B1-204ENST00000414963 SAA1P0DJI8 122 aaPredicted RBP11.39□□□□□ -0.59
SF3B1-204ENST00000414963 CD24P25063 80 aa11.39□□□□□ -0.59
SF3B1-204ENST00000414963 IER3P46695 156 aa11.39□□□□□ -0.59
SF3B1-204ENST00000414963 CYCSP99999 105 aaKnown RBP11.39□□□□□ -0.59
SF3B1-204ENST00000414963 IL15RAQ13261 267 aa11.39□□□□□ -0.59
SF3B1-204ENST00000414963 HES1Q14469 280 aa11.39□□□□□ -0.59
SF3B1-204ENST00000414963 VMA21Q3ZAQ7 101 aa11.39□□□□□ -0.59
SF3B1-204ENST00000414963 FBLN7Q53RD9 439 aa11.39□□□□□ -0.59
SF3B1-204ENST00000414963 Q6ZRM9 215 aa11.39□□□□□ -0.59
SF3B1-204ENST00000414963 IL17RELQ6ZVW7 336 aa11.39□□□□□ -0.59
SF3B1-204ENST00000414963 TMEM167AQ8TBQ9 72 aa11.39□□□□□ -0.59
SF3B1-204ENST00000414963 OR10C1Q96KK4 312 aa11.39□□□□□ -0.59
SF3B1-204ENST00000414963 ZNF48Q96MX3 618 aaPredicted RBP11.39□□□□□ -0.59
SF3B1-204ENST00000414963 ZNF436Q9C0F3 470 aaPredicted RBP11.39□□□□□ -0.59
SF3B1-204ENST00000414963 SONP18583 2426 aaKnown RBP11.38□□□□□ -0.59
SF3B1-204ENST00000414963 HIVEP2P31629 2446 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 C13orf42A0A1B0GVH6 325 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 MDFIC2A0A1B0GVS7 189 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 C5orf51A6NDU8 294 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 A6NDX4 124 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 UPK2O00526 184 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 CCSO14618 274 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 RRHO14718 337 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 NBR2O15453 112 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 SIX6O95475 246 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 GIPP09681 153 aaPredicted RBP11.38□□□□□ -0.59
SF3B1-204ENST00000414963 TMEM11P17152 192 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 F2RL1P55085 397 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms