RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 Q5BKY6 102 aa7.78□□□□□ -1.16
RIF1-202ENST00000414861 DHRS7BQ6IAN0 325 aaPredicted RBP7.78□□□□□ -1.16
RIF1-202ENST00000414861 GSG1LQ6UXU4 331 aa7.78□□□□□ -1.16
RIF1-202ENST00000414861 RNASE11Q8TAA1 199 aaKnown RBP7.78□□□□□ -1.16
RIF1-202ENST00000414861 RHOVQ96L33 236 aa7.78□□□□□ -1.16
RIF1-202ENST00000414861 HARBI1Q96MB7 349 aa7.78□□□□□ -1.16
RIF1-202ENST00000414861 OR2A7Q96R45 310 aa7.78□□□□□ -1.16
RIF1-202ENST00000414861 MDFIC2A0A1B0GVS7 189 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 OOSP1A8MZH6 123 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 G3V3Q6 166 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 SHOXO15266 292 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 CD5LO43866 347 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 IFNA21P01568 189 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 IGKV1D-33P01593 117 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 IGKV1-33P01594 117 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 GIPP09681 153 aaPredicted RBP7.77□□□□□ -1.17
RIF1-202ENST00000414861 NQO2P16083 231 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 TMEM177Q53S58 311 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 FAM120AOSQ5T036 256 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 CCDC144NLQ6NUI1 221 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 IL17RELQ6ZVW7 336 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 BCL6BQ8N143 479 aaPredicted RBP7.77□□□□□ -1.17
RIF1-202ENST00000414861 OR4C13Q8NGP0 309 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 C22orf15Q8WYQ4 148 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 LSM10Q969L4 123 aaKnown RBP7.77□□□□□ -1.17
RIF1-202ENST00000414861 FLYWCH2Q96CP2 140 aaKnown RBP7.77□□□□□ -1.17
RIF1-202ENST00000414861 PDCD10Q9BUL8 212 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 CACNG5Q9UF02 275 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 F8P00451 2351 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 TRAV3A0A0B4J244 114 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 NXPH3O95157 252 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 IGLV2-23P01705 113 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 SNRNP70P08621 437 aaKnown RBP7.77□□□□□ -1.17
RIF1-202ENST00000414861 OR9G9P0C7N8 305 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 SAA1P0DJI8 122 aaPredicted RBP7.77□□□□□ -1.17
RIF1-202ENST00000414861 RRASP10301 218 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 MC5RP33032 325 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 TAGLNQ01995 201 aaKnown RBP7.77□□□□□ -1.17
RIF1-202ENST00000414861 DMBX1Q8NFW5 382 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 RRNAD1Q96FB5 475 aaKnown RBP7.77□□□□□ -1.17
RIF1-202ENST00000414861 MS4A7Q9GZW8 240 aaPredicted RBP7.77□□□□□ -1.17
RIF1-202ENST00000414861 TMEM140Q9NV12 185 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 GSKIPQ9P0R6 139 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 NSG2Q9Y328 171 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 MMP24Q9Y5R2 645 aa7.77□□□□□ -1.17
RIF1-202ENST00000414861 HIVEP2P31629 2446 aa7.76□□□□□ -1.17
RIF1-202ENST00000414861 RPS16P62249 146 aaKnown RBP7.76□□□□□ -1.17
RIF1-202ENST00000414861 SRSF4Q08170 494 aaKnown RBP7.76□□□□□ -1.17
RIF1-202ENST00000414861 IL15RAQ13261 267 aa7.76□□□□□ -1.17
RIF1-202ENST00000414861 HNF4GQ14541 408 aa7.76□□□□□ -1.17
RIF1-202ENST00000414861 POU2AF1Q16633 256 aa7.76□□□□□ -1.17
RIF1-202ENST00000414861 LRRC37A5PQ49AS3 106 aa7.76□□□□□ -1.17
RIF1-202ENST00000414861 OR4A47Q6IF82 309 aa7.76□□□□□ -1.17
RIF1-202ENST00000414861 ZBTB8BQ8NAP8 495 aaPredicted RBP7.76□□□□□ -1.17
RIF1-202ENST00000414861 OR2T35Q8NGX2 323 aa7.76□□□□□ -1.17
RIF1-202ENST00000414861 OSR1Q8TAX0 266 aaPredicted RBP7.76□□□□□ -1.17
RIF1-202ENST00000414861 C2orf50Q96LR7 162 aa7.76□□□□□ -1.17
RIF1-202ENST00000414861 RANBP3Q9H6Z4 567 aaPredicted RBP7.76□□□□□ -1.17
RIF1-202ENST00000414861 TPSG1Q9NRR2 321 aa7.76□□□□□ -1.17
RIF1-202ENST00000414861 BOLA2-SMG1P6H3BVE0 249 aa7.76□□□□□ -1.17
RIF1-202ENST00000414861 CD1BP29016 333 aa7.76□□□□□ -1.17
RIF1-202ENST00000414861 OR2B8PP59922 312 aa7.76□□□□□ -1.17
RIF1-202ENST00000414861 ERVK-16P61578 105 aa7.76□□□□□ -1.17
RIF1-202ENST00000414861 H2BFWTQ7Z2G1 175 aa7.76□□□□□ -1.17
RIF1-202ENST00000414861 TCTE3Q8IZS6 198 aa7.76□□□□□ -1.17
RIF1-202ENST00000414861 NANPQ8TBE9 248 aa7.76□□□□□ -1.17
RIF1-202ENST00000414861 PPP1R1CQ8WVI7 109 aa7.76□□□□□ -1.17
RIF1-202ENST00000414861 NUP50Q9UKX7 468 aa7.76□□□□□ -1.17
RIF1-202ENST00000414861 FAM90A9PA6NNJ1 464 aa7.75□□□□□ -1.17
RIF1-202ENST00000414861 SLC25A17O43808 307 aa7.75□□□□□ -1.17
RIF1-202ENST00000414861 PITX3O75364 302 aa7.75□□□□□ -1.17
RIF1-202ENST00000414861 HRASP01112 189 aa7.75□□□□□ -1.17
RIF1-202ENST00000414861 RAP2BP61225 183 aa7.75□□□□□ -1.17
RIF1-202ENST00000414861 HES1Q14469 280 aa7.75□□□□□ -1.17
RIF1-202ENST00000414861 SPNS3Q6ZMD2 512 aa7.75□□□□□ -1.17
RIF1-202ENST00000414861 OR4D5Q8NGN0 318 aa7.75□□□□□ -1.17
RIF1-202ENST00000414861 EAF1Q96JC9 268 aaPredicted RBP7.75□□□□□ -1.17
RIF1-202ENST00000414861 NMES1Q9C002 83 aa7.75□□□□□ -1.17
RIF1-202ENST00000414861 YAE1D1Q9NRH1 226 aa7.75□□□□□ -1.17
RIF1-202ENST00000414861 TRAV14DV4A0A0A6YYC5 116 aa7.75□□□□□ -1.17
RIF1-202ENST00000414861 SCGB1D2O95969 90 aa7.75□□□□□ -1.17
RIF1-202ENST00000414861 MYOD1P15172 320 aa7.75□□□□□ -1.17
RIF1-202ENST00000414861 F2RL1P55085 397 aa7.75□□□□□ -1.17
RIF1-202ENST00000414861 SMCO1Q147U7 214 aa7.75□□□□□ -1.17
RIF1-202ENST00000414861 CXorf66Q5JRM2 361 aaPredicted RBP7.75□□□□□ -1.17
RIF1-202ENST00000414861 THOC7Q6I9Y2 204 aaKnown RBP7.75□□□□□ -1.17
RIF1-202ENST00000414861 C11orf87Q6NUJ2 197 aa7.75□□□□□ -1.17
RIF1-202ENST00000414861 PUSL1Q8N0Z8 303 aaKnown RBP7.75□□□□□ -1.17
RIF1-202ENST00000414861 Q8N6K4 173 aa7.75□□□□□ -1.17
RIF1-202ENST00000414861 PIFOQ8TCI5 191 aa7.75□□□□□ -1.17
RIF1-202ENST00000414861 FAM96BQ9Y3D0 163 aa7.75□□□□□ -1.17
RIF1-202ENST00000414861 CUBNO60494 3623 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 A0A1B0GU03 582 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 ATG12O94817 140 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 MOSP00540 346 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 MBPP02686 304 aaPredicted RBP7.74□□□□□ -1.17
RIF1-202ENST00000414861 IL6RP08887 468 aaPredicted RBP7.74□□□□□ -1.17
RIF1-202ENST00000414861 FBP1P09467 338 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 RELBQ01201 579 aa7.74□□□□□ -1.17
RIF1-202ENST00000414861 RAB32Q13637 225 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms