RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 LOC101059948A0A1B0GTJ6 334 aa15.84■□□□□ 0.13
SHANK3-202ENST00000414786 ZNF721Q8TF20 911 aa15.84■□□□□ 0.13
SHANK3-202ENST00000414786 LINC00862A6NCI5 91 aa15.84■□□□□ 0.13
SHANK3-202ENST00000414786 LYNX1G3V0Z9 82 aa15.84■□□□□ 0.13
SHANK3-202ENST00000414786 LYNX1P0DP58 116 aa15.84■□□□□ 0.13
SHANK3-202ENST00000414786 SCN8AQ9UQD0 1980 aa15.83■□□□□ 0.13
SHANK3-202ENST00000414786 CGB3P0DN86 165 aa15.83■□□□□ 0.13
SHANK3-202ENST00000414786 CEACAM21Q3KPI0 293 aa15.83■□□□□ 0.13
SHANK3-202ENST00000414786 KLF14Q8TD94 323 aaPredicted RBP15.83■□□□□ 0.13
SHANK3-202ENST00000414786 TMEM74BQ9NUR3 256 aa15.83■□□□□ 0.13
SHANK3-202ENST00000414786 CENPVL1A0A0U1RR11 272 aa15.83■□□□□ 0.12
SHANK3-202ENST00000414786 CD8AP01732 235 aa15.83■□□□□ 0.12
SHANK3-202ENST00000414786 MUC1P15941 1255 aaPredicted RBP15.83■□□□□ 0.12
SHANK3-202ENST00000414786 DEGS2Q6QHC5 323 aa15.83■□□□□ 0.12
SHANK3-202ENST00000414786 CST9LQ9H4G1 147 aa15.83■□□□□ 0.12
SHANK3-202ENST00000414786 AHRRA9YTQ3 701 aa15.83■□□□□ 0.12
SHANK3-202ENST00000414786 TRGC1P0CF51 173 aa15.83■□□□□ 0.12
SHANK3-202ENST00000414786 VSIG8P0DPA2 414 aa15.83■□□□□ 0.12
SHANK3-202ENST00000414786 KCNS1Q96KK3 526 aa15.83■□□□□ 0.12
SHANK3-202ENST00000414786 GGCTO75223 188 aaKnown RBP15.83■□□□□ 0.12
SHANK3-202ENST00000414786 DNAJC4Q9NNZ3 241 aa15.83■□□□□ 0.12
SHANK3-202ENST00000414786 KCNE1BA0A087WTH5 132 aa15.83■□□□□ 0.12
SHANK3-202ENST00000414786 PPIFP30405 207 aaKnown RBP15.83■□□□□ 0.12
SHANK3-202ENST00000414786 PLPPR5Q32ZL2 321 aa15.83■□□□□ 0.12
SHANK3-202ENST00000414786 RARRES2Q99969 163 aa15.83■□□□□ 0.12
SHANK3-202ENST00000414786 PNRC1Q12796 327 aaPredicted RBP15.82■□□□□ 0.12
SHANK3-202ENST00000414786 SMCHD1A6NHR9 2005 aa15.82■□□□□ 0.12
SHANK3-202ENST00000414786 METRNQ9UJH8 293 aa15.82■□□□□ 0.12
SHANK3-202ENST00000414786 C4AP0C0L4 1744 aa15.82■□□□□ 0.12
SHANK3-202ENST00000414786 ASIPP42127 132 aa15.82■□□□□ 0.12
SHANK3-202ENST00000414786 ERVK11-1P61568 191 aa15.82■□□□□ 0.12
SHANK3-202ENST00000414786 ZNF107Q9UII5 783 aaPredicted RBP15.82■□□□□ 0.12
SHANK3-202ENST00000414786 BSPH1Q075Z2 132 aa15.82■□□□□ 0.12
SHANK3-202ENST00000414786 SCGB3A1Q96QR1 104 aa15.82■□□□□ 0.12
SHANK3-202ENST00000414786 BGLAPP02818 100 aa15.82■□□□□ 0.12
SHANK3-202ENST00000414786 CD300CQ08708 224 aa15.82■□□□□ 0.12
SHANK3-202ENST00000414786 OR10J3Q5JRS4 329 aa15.82■□□□□ 0.12
SHANK3-202ENST00000414786 CHST5Q9GZS9 411 aa15.82■□□□□ 0.12
SHANK3-202ENST00000414786 PPP1R27Q86WC6 154 aa15.81■□□□□ 0.12
SHANK3-202ENST00000414786 OR5AC2Q9NZP5 309 aa15.81■□□□□ 0.12
SHANK3-202ENST00000414786 CRHP06850 196 aa15.81■□□□□ 0.12
SHANK3-202ENST00000414786 ZCCHC24Q8N2G6 241 aaKnown RBP15.81■□□□□ 0.12
SHANK3-202ENST00000414786 CLPSP04118 112 aa15.81■□□□□ 0.12
SHANK3-202ENST00000414786 F5P12259 2224 aa15.81■□□□□ 0.12
SHANK3-202ENST00000414786 TRIP12Q14669 1992 aaPredicted RBP15.81■□□□□ 0.12
SHANK3-202ENST00000414786 C17orf51A8MQB3 221 aa15.81■□□□□ 0.12
SHANK3-202ENST00000414786 GZMBP10144 247 aa15.81■□□□□ 0.12
SHANK3-202ENST00000414786 SPSB2Q99619 263 aa15.81■□□□□ 0.12
SHANK3-202ENST00000414786 TXNDC17Q9BRA2 123 aa15.81■□□□□ 0.12
SHANK3-202ENST00000414786 CHCHD5Q9BSY4 110 aa15.81■□□□□ 0.12
SHANK3-202ENST00000414786 NPIPB4C9JG80 1138 aa15.8■□□□□ 0.12
SHANK3-202ENST00000414786 SYNGR3O43761 229 aa15.8■□□□□ 0.12
SHANK3-202ENST00000414786 CGB7P0DN87 165 aa15.8■□□□□ 0.12
SHANK3-202ENST00000414786 FBLN7Q53RD9 439 aa15.8■□□□□ 0.12
SHANK3-202ENST00000414786 CYB5R2Q6BCY4 276 aa15.8■□□□□ 0.12
SHANK3-202ENST00000414786 ABHD17AQ96GS6 310 aa15.8■□□□□ 0.12
SHANK3-202ENST00000414786 ODAMA1E959 279 aa15.8■□□□□ 0.12
SHANK3-202ENST00000414786 TGIF2-C20orf24A0A0A6YYL0 155 aa15.8■□□□□ 0.12
SHANK3-202ENST00000414786 C1QTNF9BB2RNN3 333 aa15.8■□□□□ 0.12
SHANK3-202ENST00000414786 FGF5P12034 268 aa15.8■□□□□ 0.12
SHANK3-202ENST00000414786 HOXA6P31267 233 aa15.8■□□□□ 0.12
SHANK3-202ENST00000414786 SRXN1Q9BYN0 137 aa15.8■□□□□ 0.12
SHANK3-202ENST00000414786 TRGC2P03986 189 aa15.8■□□□□ 0.12
SHANK3-202ENST00000414786 LINC01465Q8N7H1 131 aa15.8■□□□□ 0.12
SHANK3-202ENST00000414786 IGKV1D-16P01601 117 aa15.8■□□□□ 0.12
SHANK3-202ENST00000414786 GCSAMQ8N6F7 178 aa15.8■□□□□ 0.12
SHANK3-202ENST00000414786 INS-IGF2F8WCM5 200 aa15.8■□□□□ 0.12
SHANK3-202ENST00000414786 HOXA3O43365 443 aaPredicted RBP15.8■□□□□ 0.12
SHANK3-202ENST00000414786 INSP01308 110 aa15.8■□□□□ 0.12
SHANK3-202ENST00000414786 RTN4RL2Q86UN3 420 aa15.8■□□□□ 0.12
SHANK3-202ENST00000414786 PARD6GQ9BYG4 376 aaPredicted RBP15.8■□□□□ 0.12
SHANK3-202ENST00000414786 OR10S1Q8NGN2 331 aa15.79■□□□□ 0.12
SHANK3-202ENST00000414786 JMJD8Q96S16 334 aa15.79■□□□□ 0.12
SHANK3-202ENST00000414786 SLIRPQ9GZT3 109 aaKnown RBP15.79■□□□□ 0.12
SHANK3-202ENST00000414786 PITX3O75364 302 aa15.79■□□□□ 0.12
SHANK3-202ENST00000414786 PRR31Q5SQ13 230 aa15.79■□□□□ 0.12
SHANK3-202ENST00000414786 S100A7L2Q5SY68 101 aa15.79■□□□□ 0.12
SHANK3-202ENST00000414786 SLC22A18ASQ8N1D0 253 aa15.79■□□□□ 0.12
SHANK3-202ENST00000414786 SCARF2Q96GP6 870 aaPredicted RBP15.79■□□□□ 0.12
SHANK3-202ENST00000414786 ALX4Q9H161 411 aaPredicted RBP15.79■□□□□ 0.12
SHANK3-202ENST00000414786 PEBP1P30086 187 aaKnown RBP15.79■□□□□ 0.12
SHANK3-202ENST00000414786 FGFRL1Q8N441 504 aa15.79■□□□□ 0.12
SHANK3-202ENST00000414786 TFF1P04155 84 aa15.79■□□□□ 0.12
SHANK3-202ENST00000414786 COL25A1Q9BXS0 654 aaPredicted RBP15.79■□□□□ 0.12
SHANK3-202ENST00000414786 TNFSF10P50591 281 aa15.79■□□□□ 0.12
SHANK3-202ENST00000414786 ZBTB34Q8NCN2 500 aa15.79■□□□□ 0.12
SHANK3-202ENST00000414786 SIGLEC12Q96PQ1 595 aa15.79■□□□□ 0.12
SHANK3-202ENST00000414786 SH3BGRL3Q9H299 93 aa15.79■□□□□ 0.12
SHANK3-202ENST00000414786 TRAF4Q9BUZ4 470 aaPredicted RBP15.78■□□□□ 0.12
SHANK3-202ENST00000414786 A0A1B0GUL6 1792 aa15.78■□□□□ 0.12
SHANK3-202ENST00000414786 KIF13AQ9H1H9 1805 aa15.78■□□□□ 0.12
SHANK3-202ENST00000414786 ATP5LO75964 103 aa15.78■□□□□ 0.12
SHANK3-202ENST00000414786 ZNF385CQ66K41 422 aaPredicted RBP15.78■□□□□ 0.12
SHANK3-202ENST00000414786 DDX60Q8IY21 1712 aaKnown RBP15.78■□□□□ 0.12
SHANK3-202ENST00000414786 EVI2AP22794 236 aa15.78■□□□□ 0.12
SHANK3-202ENST00000414786 ZNF585BQ52M93 769 aa15.78■□□□□ 0.12
SHANK3-202ENST00000414786 SAMD13Q5VXD3 122 aa15.77■□□□□ 0.12
SHANK3-202ENST00000414786 TCF24Q7RTU0 167 aa15.77■□□□□ 0.12
SHANK3-202ENST00000414786 LINC00596Q86U02 117 aa15.77■□□□□ 0.12
SHANK3-202ENST00000414786 MARS2Q96GW9 593 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms