RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 IGLV2-14P01704 120 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 IGHV3-11P01762 117 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 APOA1P02647 267 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 LGALS1P09382 135 aaKnown RBP8.7□□□□□ -1.02
RFFL-204ENST00000414419 KIR2DS2P43631 304 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 TAS2R46P59540 309 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 RPL30P62888 115 aaKnown RBP8.7□□□□□ -1.02
RFFL-204ENST00000414419 EGFEM1PQ0D2K5 195 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 CATR1Q13166 79 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 FHL3Q13643 280 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 PRSS8Q16651 343 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 DEFB121Q5J5C9 76 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 GPR107Q5VW38 600 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 IDO2Q6ZQW0 420 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 OVCH2Q7RTZ1 564 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 GPR141Q7Z602 305 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 ANKRD13BQ86YJ7 626 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 MMD2Q8IY49 270 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 POC5Q8NA72 575 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 VSTM2AQ8TAG5 236 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 GIMAP1Q8WWP7 306 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 SNAPC3Q92966 411 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 BORCS5Q969J3 196 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 AIFM2Q9BRQ8 373 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 EHFQ9NZC4 300 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 SORL1Q92673 2214 aa8.69□□□□□ -1.02
RFFL-204ENST00000414419 A0A0G2JLM5 398 aa8.69□□□□□ -1.02
RFFL-204ENST00000414419 MSGN1A6NI15 193 aa8.69□□□□□ -1.02
RFFL-204ENST00000414419 FAM25AB3EWG3 89 aa8.69□□□□□ -1.02
RFFL-204ENST00000414419 FAM25CB3EWG5 89 aa8.69□□□□□ -1.02
RFFL-204ENST00000414419 FAM25GB3EWG6 89 aa8.69□□□□□ -1.02
RFFL-204ENST00000414419 LINC01619G3V211 115 aa8.69□□□□□ -1.02
RFFL-204ENST00000414419 RAMP3O60896 148 aa8.69□□□□□ -1.02
RFFL-204ENST00000414419 PMP2P02689 132 aa8.69□□□□□ -1.02
RFFL-204ENST00000414419 EIF4EP06730 217 aaKnown RBP8.69□□□□□ -1.02
RFFL-204ENST00000414419 SAA1P0DJI8 122 aaPredicted RBP8.69□□□□□ -1.02
RFFL-204ENST00000414419 SMIM18P0DKX4 95 aa8.69□□□□□ -1.02
RFFL-204ENST00000414419 KRTAP10-11P60412 298 aa8.69□□□□□ -1.02
RFFL-204ENST00000414419 DGCR2P98153 550 aa8.69□□□□□ -1.02
RFFL-204ENST00000414419 MSMO1Q15800 293 aa8.69□□□□□ -1.02
RFFL-204ENST00000414419 TMEM17Q86X19 198 aa8.69□□□□□ -1.02
RFFL-204ENST00000414419 OR5H2Q8NGV7 314 aa8.69□□□□□ -1.02
RFFL-204ENST00000414419 SRSF12Q8WXF0 261 aaKnown RBP8.69□□□□□ -1.02
RFFL-204ENST00000414419 ALX4Q9H161 411 aaPredicted RBP8.69□□□□□ -1.02
RFFL-204ENST00000414419 COA4Q9NYJ1 87 aa8.69□□□□□ -1.02
RFFL-204ENST00000414419 OVOL1O14753 267 aa8.68□□□□□ -1.02
RFFL-204ENST00000414419 HPGDSO60760 199 aa8.68□□□□□ -1.02
RFFL-204ENST00000414419 OR2A4O95047 310 aa8.68□□□□□ -1.02
RFFL-204ENST00000414419 GABARAPO95166 117 aa8.68□□□□□ -1.02
RFFL-204ENST00000414419 HSPB1P04792 205 aaKnown RBP8.68□□□□□ -1.02
RFFL-204ENST00000414419 APELAP0DMC3 54 aa8.68□□□□□ -1.02
RFFL-204ENST00000414419 ZNF182P17025 639 aaPredicted RBP8.68□□□□□ -1.02
RFFL-204ENST00000414419 RFX2P48378 723 aa8.68□□□□□ -1.02
RFFL-204ENST00000414419 TSPAN5P62079 268 aa8.68□□□□□ -1.02
RFFL-204ENST00000414419 SSBP2P81877 361 aaPredicted RBP8.68□□□□□ -1.02
RFFL-204ENST00000414419 DYRK1AQ13627 763 aa8.68□□□□□ -1.02
RFFL-204ENST00000414419 CTF1Q16619 201 aa8.68□□□□□ -1.02
RFFL-204ENST00000414419 SNX29P2Q8IUI4 249 aa8.68□□□□□ -1.02
RFFL-204ENST00000414419 VKORC1L1Q8N0U8 176 aa8.68□□□□□ -1.02
RFFL-204ENST00000414419 SPAG16Q8N0X2 631 aa8.68□□□□□ -1.02
RFFL-204ENST00000414419 DCUN1D4Q92564 292 aa8.68□□□□□ -1.02
RFFL-204ENST00000414419 RHOVQ96L33 236 aa8.68□□□□□ -1.02
RFFL-204ENST00000414419 OR2A7Q96R45 310 aa8.68□□□□□ -1.02
RFFL-204ENST00000414419 GPHA2Q96T91 129 aa8.68□□□□□ -1.02
RFFL-204ENST00000414419 SPIN2AQ99865 258 aa8.68□□□□□ -1.02
RFFL-204ENST00000414419 SPIN2BQ9BPZ2 258 aa8.68□□□□□ -1.02
RFFL-204ENST00000414419 ZNF2Q9BSG1 426 aaPredicted RBP8.68□□□□□ -1.02
RFFL-204ENST00000414419 NAA50Q9GZZ1 169 aaKnown RBP8.68□□□□□ -1.02
RFFL-204ENST00000414419 ZNF430Q9H8G1 570 aaPredicted RBP8.68□□□□□ -1.02
RFFL-204ENST00000414419 IGHV4OR15-8A0A075B7B6 117 aa8.67□□□□□ -1.02
RFFL-204ENST00000414419 A0A087WW49 117 aa8.67□□□□□ -1.02
RFFL-204ENST00000414419 WI2-2373I1.2A0A1W2PRP0 233 aa8.67□□□□□ -1.02
RFFL-204ENST00000414419 K7EIL1 84 aa8.67□□□□□ -1.02
RFFL-204ENST00000414419 KBTBD11O94819 623 aa8.67□□□□□ -1.02
RFFL-204ENST00000414419 OR9G9P0C7N8 305 aa8.67□□□□□ -1.02
RFFL-204ENST00000414419 ELK1P19419 428 aa8.67□□□□□ -1.02
RFFL-204ENST00000414419 HLA-DMAP28067 261 aa8.67□□□□□ -1.02
RFFL-204ENST00000414419 MAS1LP35410 378 aa8.67□□□□□ -1.02
RFFL-204ENST00000414419 INSL3P51460 131 aa8.67□□□□□ -1.02
RFFL-204ENST00000414419 SLURP1P55000 103 aa8.67□□□□□ -1.02
RFFL-204ENST00000414419 EIF4EBP1Q13541 118 aaPredicted RBP8.67□□□□□ -1.02
RFFL-204ENST00000414419 DCTN2Q13561 401 aaKnown RBP8.67□□□□□ -1.02
RFFL-204ENST00000414419 AADACL3Q5VUY0 350 aa8.67□□□□□ -1.02
RFFL-204ENST00000414419 DHRS11Q6UWP2 260 aa8.67□□□□□ -1.02
RFFL-204ENST00000414419 ZNF818PQ6ZRF7 136 aa8.67□□□□□ -1.02
RFFL-204ENST00000414419 SSX9Q7RTT3 188 aa8.67□□□□□ -1.02
RFFL-204ENST00000414419 OR6F1Q8NGZ6 308 aa8.67□□□□□ -1.02
RFFL-204ENST00000414419 OR51H1Q8NH63 302 aa8.67□□□□□ -1.02
RFFL-204ENST00000414419 CD300LFQ8TDQ1 290 aa8.67□□□□□ -1.02
RFFL-204ENST00000414419 TINAGL1Q9GZM7 467 aaPredicted RBP8.67□□□□□ -1.02
RFFL-204ENST00000414419 SCPEP1Q9HB40 452 aa8.67□□□□□ -1.02
RFFL-204ENST00000414419 RANGRFQ9HD47 186 aaPredicted RBP8.67□□□□□ -1.02
RFFL-204ENST00000414419 DPPA5A6NC42 116 aa8.66□□□□□ -1.02
RFFL-204ENST00000414419 SULT1C2O00338 296 aa8.66□□□□□ -1.02
RFFL-204ENST00000414419 RBFOX2O43251 390 aaKnown RBP eCLIP8.66□□□□□ -1.022e-6■■□□□ 13
RFFL-204ENST00000414419 SAP30O75446 220 aa8.66□□□□□ -1.02
RFFL-204ENST00000414419 BRI3O95415 125 aa8.66□□□□□ -1.02
RFFL-204ENST00000414419 HPRT1P00492 218 aa8.66□□□□□ -1.02
RFFL-204ENST00000414419 NAT1P18440 290 aa8.66□□□□□ -1.02
RFFL-204ENST00000414419 ZP3P21754 424 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms