RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 CLN8Q9UBY8 286 aa14.02□□□□□ -0.17
PTPRC-206ENST00000413409 KIAA2026Q5HYC2 2103 aa14.01□□□□□ -0.17
PTPRC-206ENST00000413409 B9A039 149 aa14.01□□□□□ -0.17
PTPRC-206ENST00000413409 RAB29O14966 203 aa14.01□□□□□ -0.17
PTPRC-206ENST00000413409 SYNGR2O43760 224 aa14.01□□□□□ -0.17
PTPRC-206ENST00000413409 MED6O75586 246 aa14.01□□□□□ -0.17
PTPRC-206ENST00000413409 GYPAP02724 150 aa14.01□□□□□ -0.17
PTPRC-206ENST00000413409 APOBEC3AP31941 199 aaPredicted RBP14.01□□□□□ -0.17
PTPRC-206ENST00000413409 KIR2DS2P43631 304 aa14.01□□□□□ -0.17
PTPRC-206ENST00000413409 TCF23Q7RTU1 214 aa14.01□□□□□ -0.17
PTPRC-206ENST00000413409 ODF3L1Q8IXM7 274 aa14.01□□□□□ -0.17
PTPRC-206ENST00000413409 FGFRL1Q8N441 504 aa14.01□□□□□ -0.17
PTPRC-206ENST00000413409 CCL13Q99616 98 aa14.01□□□□□ -0.17
PTPRC-206ENST00000413409 IFI27L2Q9H2X8 130 aa14.01□□□□□ -0.17
PTPRC-206ENST00000413409 MS4A5Q9H3V2 200 aa14.01□□□□□ -0.17
PTPRC-206ENST00000413409 DYNLRB1Q9NP97 96 aa14.01□□□□□ -0.17
PTPRC-206ENST00000413409 STRAPQ9Y3F4 350 aaKnown RBP14.01□□□□□ -0.17
PTPRC-206ENST00000413409 KMT2CQ8NEZ4 4911 aaKnown RBP14□□□□□ -0.17
PTPRC-206ENST00000413409 TMEM89A2RUT3 159 aa14□□□□□ -0.17
PTPRC-206ENST00000413409 FAM90A9PA6NNJ1 464 aa14□□□□□ -0.17
PTPRC-206ENST00000413409 C17orf98A8MV24 154 aa14□□□□□ -0.17
PTPRC-206ENST00000413409 TMEM178BH3BS89 294 aa14□□□□□ -0.17
PTPRC-206ENST00000413409 TXNL1O43396 289 aa14□□□□□ -0.17
PTPRC-206ENST00000413409 DFFBO76075 338 aa14□□□□□ -0.17
PTPRC-206ENST00000413409 S1PR2O95136 353 aa14□□□□□ -0.17
PTPRC-206ENST00000413409 DUTP33316 252 aaKnown RBP14□□□□□ -0.17
PTPRC-206ENST00000413409 SULT1A1P50225 295 aa14□□□□□ -0.17
PTPRC-206ENST00000413409 ARHGDIBP52566 201 aa14□□□□□ -0.17
PTPRC-206ENST00000413409 MEF2CQ06413 473 aaPredicted RBP14□□□□□ -0.17
PTPRC-206ENST00000413409 MIDNQ504T8 468 aa14□□□□□ -0.17
PTPRC-206ENST00000413409 PXDC1Q5TGL8 231 aa14□□□□□ -0.17
PTPRC-206ENST00000413409 FAM216BQ8N7L0 139 aa14□□□□□ -0.17
PTPRC-206ENST00000413409 OR10A7Q8NGE5 316 aa14□□□□□ -0.17
PTPRC-206ENST00000413409 ABHD14AQ9BUJ0 271 aa14□□□□□ -0.17
PTPRC-206ENST00000413409 IDI2-AS1Q9NZ38 188 aa14□□□□□ -0.17
PTPRC-206ENST00000413409 HSPB7Q9UBY9 170 aa14□□□□□ -0.17
PTPRC-206ENST00000413409 LINC00312Q9Y6C7 94 aa14□□□□□ -0.17
PTPRC-206ENST00000413409 PPIAL4EA0A075B759 164 aa13.99□□□□□ -0.17
PTPRC-206ENST00000413409 IGHV4-61A0A0C4DH41 118 aa13.99□□□□□ -0.17
PTPRC-206ENST00000413409 hADV38S2A0JD32 116 aa13.99□□□□□ -0.17
PTPRC-206ENST00000413409 LINC00473A8K010 186 aa13.99□□□□□ -0.17
PTPRC-206ENST00000413409 PPIAL4DF5H284 164 aa13.99□□□□□ -0.17
PTPRC-206ENST00000413409 RAMP3O60896 148 aa13.99□□□□□ -0.17
PTPRC-206ENST00000413409 FBXO24O75426 580 aa13.99□□□□□ -0.17
PTPRC-206ENST00000413409 PPIAL4FP0DN26 164 aa13.99□□□□□ -0.17
PTPRC-206ENST00000413409 F2RL1P55085 397 aa13.99□□□□□ -0.17
PTPRC-206ENST00000413409 BRWD1-AS2P59051 145 aa13.99□□□□□ -0.17
PTPRC-206ENST00000413409 PJVKQ0ZLH3 352 aa13.99□□□□□ -0.17
PTPRC-206ENST00000413409 LTC4SQ16873 150 aa13.99□□□□□ -0.17
PTPRC-206ENST00000413409 DUX4L9Q6RFH8 374 aaPredicted RBP13.99□□□□□ -0.17
PTPRC-206ENST00000413409 BTNL3Q6UXE8 466 aa13.99□□□□□ -0.17
PTPRC-206ENST00000413409 DEFB108BQ8NET1 73 aa13.99□□□□□ -0.17
PTPRC-206ENST00000413409 ATP5SQ99766 215 aa13.99□□□□□ -0.17
PTPRC-206ENST00000413409 CBLN4Q9NTU7 201 aa13.99□□□□□ -0.17
PTPRC-206ENST00000413409 TMEM106BQ9NUM4 274 aa13.99□□□□□ -0.17
PTPRC-206ENST00000413409 DCAF16Q9NXF7 216 aa13.99□□□□□ -0.17
PTPRC-206ENST00000413409 PPIAL4AQ9Y536 164 aa13.99□□□□□ -0.17
PTPRC-206ENST00000413409 DSCAML1Q8TD84 2053 aa13.99□□□□□ -0.17
PTPRC-206ENST00000413409 TRIM77I1YAP6 450 aa13.98□□□□□ -0.17
PTPRC-206ENST00000413409 DYNLT3P51808 116 aa13.98□□□□□ -0.17
PTPRC-206ENST00000413409 TNFRSF9Q07011 255 aa13.98□□□□□ -0.17
PTPRC-206ENST00000413409 ZNF816Q0VGE8 651 aaPredicted RBP13.98□□□□□ -0.17
PTPRC-206ENST00000413409 IZUMO4Q1ZYL8 232 aa13.98□□□□□ -0.17
PTPRC-206ENST00000413409 BTNL8Q6UX41 500 aa13.98□□□□□ -0.17
PTPRC-206ENST00000413409 ZNF439Q8NDP4 499 aa13.98□□□□□ -0.17
PTPRC-206ENST00000413409 OR5C1Q8NGR4 320 aa13.98□□□□□ -0.17
PTPRC-206ENST00000413409 LYPD6BQ8NI32 183 aa13.98□□□□□ -0.17
PTPRC-206ENST00000413409 TSNAXQ99598 290 aaKnown RBP13.98□□□□□ -0.17
PTPRC-206ENST00000413409 PLA2G2EQ9NZK7 142 aa13.98□□□□□ -0.17
PTPRC-206ENST00000413409 NXPH3O95157 252 aa13.97□□□□□ -0.17
PTPRC-206ENST00000413409 G6PCP35575 357 aa13.97□□□□□ -0.17
PTPRC-206ENST00000413409 SRP14P37108 136 aaKnown RBP13.97□□□□□ -0.17
PTPRC-206ENST00000413409 EFNA4P52798 201 aa13.97□□□□□ -0.17
PTPRC-206ENST00000413409 CLINT1Q14677 625 aa13.97□□□□□ -0.17
PTPRC-206ENST00000413409 AARDQ4LEZ3 155 aa13.97□□□□□ -0.17
PTPRC-206ENST00000413409 OR2B11Q5JQS5 317 aa13.97□□□□□ -0.17
PTPRC-206ENST00000413409 Q6ZRG5 221 aa13.97□□□□□ -0.17
PTPRC-206ENST00000413409 COMMD1Q8N668 190 aa13.97□□□□□ -0.17
PTPRC-206ENST00000413409 GNPNAT1Q96EK6 184 aaPredicted RBP13.97□□□□□ -0.17
PTPRC-206ENST00000413409 ADTRPQ96IZ2 230 aa13.97□□□□□ -0.17
PTPRC-206ENST00000413409 GAL3ST2Q9H3Q3 398 aa13.97□□□□□ -0.17
PTPRC-206ENST00000413409 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.97□□□□□ -0.17
PTPRC-206ENST00000413409 SLC25A10Q9UBX3 287 aaPredicted RBP13.97□□□□□ -0.17
PTPRC-206ENST00000413409 RYR3Q15413 4870 aa13.97□□□□□ -0.17
PTPRC-206ENST00000413409 MEX3AA1L020 520 aaKnown RBP13.96□□□□□ -0.17
PTPRC-206ENST00000413409 UMAD1C9J7I0 102 aa13.96□□□□□ -0.17
PTPRC-206ENST00000413409 M0R1X1 148 aa13.96□□□□□ -0.17
PTPRC-206ENST00000413409 TNFRSF13BO14836 293 aaPredicted RBP13.96□□□□□ -0.17
PTPRC-206ENST00000413409 TMPRSS2O15393 492 aa13.96□□□□□ -0.17
PTPRC-206ENST00000413409 CST7O76096 145 aa13.96□□□□□ -0.17
PTPRC-206ENST00000413409 LY86O95711 162 aa13.96□□□□□ -0.17
PTPRC-206ENST00000413409 CRYZL1O95825 349 aa13.96□□□□□ -0.17
PTPRC-206ENST00000413409 HPRT1P00492 218 aa13.96□□□□□ -0.17
PTPRC-206ENST00000413409 NCR3LG1Q68D85 454 aa13.96□□□□□ -0.17
PTPRC-206ENST00000413409 H2BFWTQ7Z2G1 175 aa13.96□□□□□ -0.17
PTPRC-206ENST00000413409 HSD17B11Q8NBQ5 300 aa13.96□□□□□ -0.17
PTPRC-206ENST00000413409 BPIFCQ8NFQ6 507 aa13.96□□□□□ -0.17
PTPRC-206ENST00000413409 PSENENQ9NZ42 101 aa13.96□□□□□ -0.17
PTPRC-206ENST00000413409 KAAG1Q9UBP8 84 aa13.96□□□□□ -0.17
PTPRC-206ENST00000413409 RPUSD1Q9UJJ7 312 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms