RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 NCMAPQ5T1S8 102 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 VSTM2AQ8TAG5 236 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 TM2D1Q9BX74 207 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 C1RLQ9NZP8 487 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 GOSR1O95249 250 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 RRASP10301 218 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 ZNF343Q6P1L6 599 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 BEND2Q8NDZ0 799 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 OR2G3Q8NGZ4 309 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 OR10C1Q96KK4 312 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 LYZL4Q96KX0 146 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 OR51I2Q9H344 312 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 MED9Q9NWA0 146 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 ZNF319Q9P2F9 582 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 PRUNE2Q8WUY3 3088 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 A0A1W2PPQ1 181 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 LINC00862A6NCI5 91 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 ZNF729A6NN14 1252 aaPredicted RBP7.22□□□□□ -1.25
SYNE1-211ENST00000413186 DEFA4P12838 97 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 NPBWR2P48146 333 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 AANATQ16613 207 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 THNSL2Q86YJ6 484 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 TGIF2LYQ8IUE0 185 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 RPRMLQ8N4K4 120 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 HSD17B10Q99714 261 aaKnown RBP7.22□□□□□ -1.25
SYNE1-211ENST00000413186 PRORYQ9H606 182 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 LAMA1P25391 3075 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 SHISA3A0PJX4 238 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 J3QKU1 62 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 F12P00748 615 aaPredicted RBP7.22□□□□□ -1.25
SYNE1-211ENST00000413186 MELTFP08582 738 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 PGA5P0DJD9 388 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 CXCL3P19876 107 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 CD300CQ08708 224 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 C17orf107Q6ZR85 190 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 BVESQ8NE79 360 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 TMED6Q8WW62 240 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 ABCA4P78363 2273 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 PKDREJQ9NTG1 2253 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 TRBV23-1A0A0A0MS06 115 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 C3orf85A0A1B0GTC6 90 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 IFITM10A6NMD0 228 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 H2AFB1P0C5Y9 115 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 ZP3P21754 424 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 HTR1DP28221 377 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 CALHM1Q8IU99 346 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 MTCH1Q9NZJ7 389 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 KCNK7Q9Y2U2 307 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 FAM208BQ5VWN6 2430 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 MEX3AA1L020 520 aaKnown RBP7.22□□□□□ -1.25
SYNE1-211ENST00000413186 LIPFP07098 398 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 AGAP20933 346 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 C5orf47Q569G3 176 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 SIGIRRQ6IA17 410 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 CLEC18BQ6UXF7 455 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 FAM168AQ92567 244 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 PINX1Q96BK5 328 aaKnown RBP7.22□□□□□ -1.25
SYNE1-211ENST00000413186 SIGMAR1Q99720 223 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 FKBP11Q9NYL4 201 aa7.22□□□□□ -1.25
SYNE1-211ENST00000413186 K7N7A8 449 aa7.21□□□□□ -1.25
SYNE1-211ENST00000413186 FCN1O00602 326 aa7.21□□□□□ -1.25
SYNE1-211ENST00000413186 SOX15O60248 233 aa7.21□□□□□ -1.25
SYNE1-211ENST00000413186 YIF1AO95070 293 aa7.21□□□□□ -1.25
SYNE1-211ENST00000413186 ACAA1P09110 424 aaPredicted RBP7.21□□□□□ -1.25
SYNE1-211ENST00000413186 DSCR9P59020 149 aa7.21□□□□□ -1.25
SYNE1-211ENST00000413186 KHDC1LQ5JSQ8 128 aa7.21□□□□□ -1.25
SYNE1-211ENST00000413186 MS4A10Q96PG2 267 aa7.21□□□□□ -1.25
SYNE1-211ENST00000413186 DPRXA6NFQ7 191 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 HBZP02008 142 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 OR8U8P0C7N1 319 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 PSMB3P49720 205 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 RNASEKQ6P5S7 137 aaKnown RBP7.21□□□□□ -1.26
SYNE1-211ENST00000413186 LRP11Q86VZ4 500 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 PAQR4Q8N4S7 273 aaPredicted RBP7.21□□□□□ -1.26
SYNE1-211ENST00000413186 TMEM56Q96MV1 263 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 NRIP2Q9BQI9 281 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 CALYQ9NYX4 217 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 LOC105371242A0A075B767 164 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 PPIAL4CA0A0B4J2A2 164 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 TMEM238LA0A1B0GVL6 79 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 A0A1W2PN81 502 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 CLPSL1A2RUU4 121 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 A6NJY4 79 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 F5H697 171 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 THBDP07204 575 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 PPIAL4GP0DN37 164 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 CHRNA7P36544 502 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 LPAR6P43657 344 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 BAXQ07812 192 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 STPG2Q8N412 459 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 OR10P1Q8NGE3 313 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 INSIG2Q9Y5U4 225 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 EML5Q05BV3 1969 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 M0QZK8 103 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 GGCTO75223 188 aaKnown RBP7.21□□□□□ -1.26
SYNE1-211ENST00000413186 ZNF250P15622 560 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 VDAC1P21796 283 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 P2RY1P47900 373 aa7.21□□□□□ -1.26
SYNE1-211ENST00000413186 MEF2CQ06413 473 aaPredicted RBP7.21□□□□□ -1.26
SYNE1-211ENST00000413186 COLCA1Q6ZS62 124 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms