RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 OR13C6PQ8NH95 151 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 PIGCQ92535 297 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 ARPC1AQ92747 370 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 C4orf45Q96LM5 186 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 C18orf15Q96N68 181 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 SMIM14Q96QK8 99 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 CDX2Q99626 313 aaPredicted RBP4.39□□□□□ -1.71
HERC4-205ENST00000412272 VGLL1Q99990 258 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 PELI2Q9HAT8 420 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 GNB4Q9HAV0 340 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 HES4Q9HCC6 221 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 PRTFDC1Q9NRG1 225 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 EHFQ9NZC4 300 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 DUSP13Q9UII6 198 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 ZNF257Q9Y2Q1 563 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 LOXL2Q9Y4K0 774 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 R4GN57 208 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 CPAMD8Q8IZJ3 1885 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 KMT2EQ8IZD2 1858 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 A0A0A6YYD5 115 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 CCL15-CCL14A0A0B4J2E2 113 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 DUXBA0A1W2PPF3 345 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 NBR2O15453 112 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 NTN1O95631 604 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 ATP1B2P14415 290 aaPredicted RBP4.38□□□□□ -1.71
HERC4-205ENST00000412272 CRYBB3P26998 211 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 RPS4XP62701 263 aaKnown RBP4.38□□□□□ -1.71
HERC4-205ENST00000412272 DHRS13Q6UX07 377 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 HSD17B10Q99714 261 aaKnown RBP4.38□□□□□ -1.71
HERC4-205ENST00000412272 AKIRIN1Q9H9L7 192 aaPredicted RBP4.38□□□□□ -1.71
HERC4-205ENST00000412272 C20orf141Q9NUB4 165 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 MDFICQ9P1T7 246 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 INSL5Q9Y5Q6 135 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 SCN5AQ14524 2016 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 LOC102725191A0A1B0GVB3 256 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 TINCRA0A1B0GVN0 87 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 A0A1B0GX51 115 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 J3KT08 172 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 CRYGDP07320 174 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 SP1P08047 785 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 KIR3DS1Q14943 382 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 KIAA2026Q5HYC2 2103 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 LIAT1Q6ZQX7 453 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 PFN4Q8NHR9 129 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 BAALCQ8WXS3 180 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 LINC00477Q96M19 166 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 ATG10Q9H0Y0 220 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 PRO0461Q9UI25 63 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 IER3IP1Q9Y5U9 82 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 EP400Q96L91 3159 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 NSG1A0A0A6YYJ2 146 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 A0A0D9SEW6 157 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 TMEM8BA6NDV4 472 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 CRYM-AS1A6NIL9 109 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 TBL1XO60907 577 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 KBTBD11O94819 623 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 FABP2P12104 132 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 MZT1Q08AG7 82 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 PRR30Q53SZ7 412 aaPredicted RBP4.38□□□□□ -1.71
HERC4-205ENST00000412272 FBXL14Q8N1E6 418 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 ZNF808Q8N4W9 903 aaPredicted RBP4.38□□□□□ -1.71
HERC4-205ENST00000412272 OR8B3Q8NGG8 313 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 ZNRF2Q8NHG8 242 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 SGMS2Q8NHU3 365 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 C18orf12Q96KH6 178 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 OR8B2Q96RD0 313 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 A0A0U1RRA0 63 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 SRSF10O75494 262 aaKnown RBP4.38□□□□□ -1.71
HERC4-205ENST00000412272 HIST1H1CP16403 213 aaKnown RBP4.38□□□□□ -1.71
HERC4-205ENST00000412272 COL8A1P27658 744 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 DAP3P51398 398 aaKnown RBP4.38□□□□□ -1.71
HERC4-205ENST00000412272 ASTLQ6HA08 431 aaPredicted RBP4.38□□□□□ -1.71
HERC4-205ENST00000412272 SLC35E4Q6ICL7 350 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 DUX4L9Q6RFH8 374 aaPredicted RBP4.38□□□□□ -1.71
HERC4-205ENST00000412272 TPRX1Q8N7U7 411 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 ZNF439Q8NDP4 499 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 MRPL30Q8TCC3 161 aaKnown RBP4.38□□□□□ -1.71
HERC4-205ENST00000412272 HOXB13Q92826 284 aaPredicted RBP4.38□□□□□ -1.71
HERC4-205ENST00000412272 BADQ92934 168 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 KIR2DL4Q99706 377 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 MS4A6AQ9H2W1 248 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 IL21Q9HBE4 155 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 LIN7CQ9NUP9 197 aaKnown RBP4.38□□□□□ -1.71
HERC4-205ENST00000412272 KCNS2Q9ULS6 477 aa4.38□□□□□ -1.71
HERC4-205ENST00000412272 EML5Q05BV3 1969 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 A0A0B4J2E0 115 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 A0A1B0GX12 115 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 OR4C46A6NHA9 309 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.37□□□□□ -1.71
HERC4-205ENST00000412272 NDUFB2O95178 105 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 FAM106CPP0CH98 169 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 MEOX1P50221 254 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 CXCL9Q07325 125 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 FAM106AQ4KMX7 169 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 EBLN2Q6P2I7 272 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 ZNF695Q8IW36 515 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 STPG3Q8N7X2 389 aa4.37□□□□□ -1.71
HERC4-205ENST00000412272 OR1L4Q8NGR5 311 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms